RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 JMJD4Q9H9V9 463 aa23.83■■□□□ 1.41
TMEM50B-204ENST00000442441 VAT1LQ9HCJ6 419 aa23.83■■□□□ 1.41
TMEM50B-204ENST00000442441 INSL6Q9Y581 213 aa23.83■■□□□ 1.41
TMEM50B-204ENST00000442441 MYH6P13533 1939 aa23.82■■□□□ 1.4
TMEM50B-204ENST00000442441 FAM86C2PA6NEL3 165 aa23.82■■□□□ 1.4
TMEM50B-204ENST00000442441 PPFIA4O75335 1185 aa23.82■■□□□ 1.4
TMEM50B-204ENST00000442441 PARP1P09874 1014 aaKnown RBP23.82■■□□□ 1.4
TMEM50B-204ENST00000442441 LEXMQ3ZCV2 418 aa23.82■■□□□ 1.4
TMEM50B-204ENST00000442441 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.82■■□□□ 1.47e-6■□□□□ 10.6
TMEM50B-204ENST00000442441 MYH7BA7E2Y1 1941 aa23.82■■□□□ 1.4
TMEM50B-204ENST00000442441 EMSYQ7Z589 1322 aa23.82■■□□□ 1.4
TMEM50B-204ENST00000442441 RBAK-RBAKDNI3L0D1 243 aa23.81■■□□□ 1.4
TMEM50B-204ENST00000442441 HSD17B4P51659 736 aa23.81■■□□□ 1.4
TMEM50B-204ENST00000442441 HDAC1Q13547 482 aaPredicted RBP23.81■■□□□ 1.4
TMEM50B-204ENST00000442441 HIC1Q14526 733 aa23.81■■□□□ 1.4
TMEM50B-204ENST00000442441 MYSM1Q5VVJ2 828 aa23.81■■□□□ 1.4
TMEM50B-204ENST00000442441 ENAHQ8N8S7 591 aaPredicted RBP23.81■■□□□ 1.4
TMEM50B-204ENST00000442441 FBXO22Q8NEZ5 403 aa23.81■■□□□ 1.4
TMEM50B-204ENST00000442441 PIEZO1Q92508 2521 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 OPLAHO14841 1288 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 RGS20O76081 388 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 AMHP03971 560 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 SDSP20132 328 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 KCNA5P22460 613 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 GHRHRQ02643 423 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 MKRN4PQ13434 485 aaPredicted RBP23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 KCNV1Q6PIU1 500 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 SERINC5Q86VE9 423 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 FAM178BQ8IXR5 827 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 DBF4BQ8NFT6 615 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 C17orf80Q9BSJ5 609 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 AMNQ9BXJ7 453 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 MUC6Q6W4X9 2439 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 LAMA4Q16363 1823 aa23.8■■□□□ 1.4
TMEM50B-204ENST00000442441 B4E1Z4 1266 aa23.79■■□□□ 1.4
TMEM50B-204ENST00000442441 MYCLP12524 364 aaPredicted RBP23.79■■□□□ 1.4
TMEM50B-204ENST00000442441 THPOP40225 353 aa23.79■■□□□ 1.4
TMEM50B-204ENST00000442441 HTRA4P83105 476 aaPredicted RBP23.79■■□□□ 1.4
TMEM50B-204ENST00000442441 HSDL1Q3SXM5 330 aa23.79■■□□□ 1.4
TMEM50B-204ENST00000442441 CELF3Q5SZQ8 465 aaKnown RBP23.79■■□□□ 1.4
TMEM50B-204ENST00000442441 MYOCDQ8IZQ8 938 aa23.79■■□□□ 1.4
TMEM50B-204ENST00000442441 GJD3Q8N144 294 aa23.79■■□□□ 1.4
TMEM50B-204ENST00000442441 SPATA33Q96N06 139 aa23.79■■□□□ 1.4
TMEM50B-204ENST00000442441 PDCD2LQ9BRP1 358 aa23.79■■□□□ 1.4
TMEM50B-204ENST00000442441 ZSWIM5Q9P217 1185 aa23.79■■□□□ 1.4
TMEM50B-204ENST00000442441 RSPH10B2B2RC85 870 aa23.78■■□□□ 1.4
TMEM50B-204ENST00000442441 GGPS1O95749 300 aa23.78■■□□□ 1.4
TMEM50B-204ENST00000442441 RSPH10BP0C881 870 aa23.78■■□□□ 1.4
TMEM50B-204ENST00000442441 STOX1Q6ZVD7 989 aa23.78■■□□□ 1.4
TMEM50B-204ENST00000442441 SP7Q8TDD2 431 aaPredicted RBP23.78■■□□□ 1.4
TMEM50B-204ENST00000442441 MAP3K20Q9NYL2 800 aaKnown RBP23.78■■□□□ 1.4
TMEM50B-204ENST00000442441 CTNNA3Q9UI47 895 aa23.78■■□□□ 1.4
TMEM50B-204ENST00000442441 SORBS3O60504 671 aa23.77■■□□□ 1.4
TMEM50B-204ENST00000442441 PTCRAQ6ISU1 281 aaPredicted RBP23.77■■□□□ 1.4
TMEM50B-204ENST00000442441 VSIG10LQ86VR7 867 aa23.77■■□□□ 1.4
TMEM50B-204ENST00000442441 MRPL38Q96DV4 380 aaKnown RBP23.77■■□□□ 1.4
TMEM50B-204ENST00000442441 C16orf70Q9BSU1 422 aa23.77■■□□□ 1.4
TMEM50B-204ENST00000442441 LNPKQ9C0E8 428 aa23.77■■□□□ 1.4
TMEM50B-204ENST00000442441 MICAL3Q7RTP6 2002 aa23.77■■□□□ 1.4
TMEM50B-204ENST00000442441 IL9P15248 144 aa23.76■■□□□ 1.39
TMEM50B-204ENST00000442441 SP2Q02086 613 aa23.76■■□□□ 1.39
TMEM50B-204ENST00000442441 PTPROQ16827 1216 aa23.76■■□□□ 1.39
TMEM50B-204ENST00000442441 PLEKHG4Q58EX7 1191 aa23.76■■□□□ 1.39
TMEM50B-204ENST00000442441 STAG2Q8N3U4 1231 aa23.76■■□□□ 1.39
TMEM50B-204ENST00000442441 C17orf102A2RUQ5 167 aa23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 PPP1R11O60927 126 aaPredicted RBP23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 TGFB3P10600 412 aa23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 UBA1P22314 1058 aaKnown RBP23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 SSTR3P32745 418 aaPredicted RBP23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 RRP1P56182 461 aaKnown RBP23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 PGM5Q15124 567 aa23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 EPC2Q52LR7 807 aa23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 CWC27Q6UX04 472 aaKnown RBP23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 SAMD3Q8N6K7 520 aa23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 ATP6V0A1Q93050 837 aa23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 SAMD11Q96NU1 681 aa23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 UBAC1Q9BSL1 405 aa23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 KRT23Q9C075 422 aa23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 PCDHA1Q9Y5I3 950 aa23.75■■□□□ 1.39
TMEM50B-204ENST00000442441 GRXCR2A6NFK2 248 aa23.74■■□□□ 1.39
TMEM50B-204ENST00000442441 PRR33A8MZF0 331 aa23.74■■□□□ 1.39
TMEM50B-204ENST00000442441 KLRF2D3W0D1 207 aa23.74■■□□□ 1.39
TMEM50B-204ENST00000442441 HOXA13P31271 388 aaPredicted RBP23.74■■□□□ 1.39
TMEM50B-204ENST00000442441 HOXC8P31273 242 aa23.74■■□□□ 1.39
TMEM50B-204ENST00000442441 IMMTQ16891 758 aaKnown RBP23.74■■□□□ 1.39
TMEM50B-204ENST00000442441 PUS10Q3MIT2 529 aaKnown RBP23.74■■□□□ 1.39
TMEM50B-204ENST00000442441 IL31RAQ8NI17 732 aa23.74■■□□□ 1.39
TMEM50B-204ENST00000442441 NEK9Q8TD19 979 aa23.74■■□□□ 1.39
TMEM50B-204ENST00000442441 MTMR8Q96EF0 704 aa23.74■■□□□ 1.39
TMEM50B-204ENST00000442441 MLXIPQ9HAP2 919 aa23.74■■□□□ 1.39
TMEM50B-204ENST00000442441 H3BRB1 525 aa23.73■■□□□ 1.39
TMEM50B-204ENST00000442441 ZBTB5O15062 677 aa23.73■■□□□ 1.39
TMEM50B-204ENST00000442441 TIGD5Q53EQ6 642 aa23.73■■□□□ 1.39
TMEM50B-204ENST00000442441 IFIT1BQ5T764 474 aaKnown RBP23.73■■□□□ 1.39
TMEM50B-204ENST00000442441 SEPT8Q92599 483 aa23.73■■□□□ 1.39
TMEM50B-204ENST00000442441 TOP1MTQ969P6 601 aa23.73■■□□□ 1.39
TMEM50B-204ENST00000442441 YME1L1Q96TA2 773 aa23.73■■□□□ 1.39
TMEM50B-204ENST00000442441 DSCC1Q9BVC3 393 aa23.73■■□□□ 1.39
TMEM50B-204ENST00000442441 TUT1Q9H6E5 874 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms