RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 STAG1Q8WVM7 1258 aa7.31□□□□□ -1.24
HDAC9-215ENST00000441986 ARNTL2Q8WYA1 636 aa7.31□□□□□ -1.24
HDAC9-215ENST00000441986 CEP95Q96GE4 821 aa7.31□□□□□ -1.24
HDAC9-215ENST00000441986 SCLYQ96I15 445 aa7.31□□□□□ -1.24
HDAC9-215ENST00000441986 FGD4Q96M96 766 aa7.31□□□□□ -1.24
HDAC9-215ENST00000441986 SLC9A7Q96T83 725 aa7.31□□□□□ -1.24
HDAC9-215ENST00000441986 FTOQ9C0B1 505 aaKnown RBP eCLIP7.31□□□□□ -1.24
HDAC9-215ENST00000441986 CHMP4BQ9H444 224 aaKnown RBP7.31□□□□□ -1.24
HDAC9-215ENST00000441986 A1CFQ9NQ94 594 aaKnown RBP7.31□□□□□ -1.24
HDAC9-215ENST00000441986 LMCD1Q9NZU5 365 aa7.31□□□□□ -1.24
HDAC9-215ENST00000441986 ISY1Q9ULR0 285 aaKnown RBP7.31□□□□□ -1.24
HDAC9-215ENST00000441986 ASTN1O14525 1302 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 PLXNA1Q9UIW2 1896 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 IGKV6D-41A0A0C4DH26 115 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 PATL2C9JE40 543 aaKnown RBP7.3□□□□□ -1.24
HDAC9-215ENST00000441986 KPNA6O60684 536 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 PLA2G6O60733 806 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 SLC3A2P08195 630 aaKnown RBP7.3□□□□□ -1.24
HDAC9-215ENST00000441986 TSPY3P0CV98 308 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 TSPY8P0CW00 308 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 CYP2C9P11712 490 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 ALAS1P13196 640 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 SLC1A4P43007 532 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 CPT1AP50416 773 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 BFSP2Q13515 415 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 TTLL4Q14679 1199 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 DUSP28Q4G0W2 176 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 RCSD1Q6JBY9 416 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 EEPD1Q7L9B9 569 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 HERC6Q8IVU3 1022 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 FOXJ1Q92949 421 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 MPHOSPH6Q99547 160 aaKnown RBP7.3□□□□□ -1.24
HDAC9-215ENST00000441986 MTG1Q9BT17 334 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-215ENST00000441986 C1QTNF2Q9BXJ5 285 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 VRTNQ9H8Y1 702 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 CERS4Q9HA82 394 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 VTA1Q9NP79 307 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 PDGFCQ9NRA1 345 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 RNF146Q9NTX7 359 aa7.3□□□□□ -1.24
HDAC9-215ENST00000441986 ADD3Q9UEY8 706 aaKnown RBP7.3□□□□□ -1.24
HDAC9-215ENST00000441986 TNKSO95271 1327 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 LOC102724159A0A0B4J2E5 919 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 RNF223E7ERA6 249 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 PI4K2BG5E9Z4 385 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 LZTS3O60299 673 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-215ENST00000441986 BAIAP3O94812 1187 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 ZFYP08048 801 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-215ENST00000441986 MYL3P08590 195 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 IQCF3P0C7M6 154 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 MCCP23508 829 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 TDO2P48775 406 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 TFAP4Q01664 338 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 TAP1Q03518 808 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 PTPN11Q06124 597 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-215ENST00000441986 PWP2Q15269 919 aaKnown RBP7.29□□□□□ -1.24
HDAC9-215ENST00000441986 LRRFIP1Q32MZ4 808 aaKnown RBP7.29□□□□□ -1.24
HDAC9-215ENST00000441986 MAP7D1Q3KQU3 841 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 LINC01559Q495D7 138 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 C4orf48Q5BLP8 95 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 NFRKBQ6P4R8 1299 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 PLPP7Q8NBV4 271 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 NEDD1Q8NHV4 660 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 PANK1Q8TE04 598 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 VWCEQ96DN2 955 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 GMCL1Q96IK5 515 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 WDR11Q9BZH6 1224 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 NACAP1Q9BZK3 213 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 TRMT13Q9NUP7 481 aaKnown RBP7.29□□□□□ -1.24
HDAC9-215ENST00000441986 CYP39A1Q9NYL5 469 aa7.29□□□□□ -1.24
HDAC9-215ENST00000441986 ZNF536O15090 1300 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 RAD50Q92878 1312 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 RBM47A0AV96 593 aaKnown RBP7.28□□□□□ -1.24
HDAC9-215ENST00000441986 B4DLN1 442 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 NKRFO15226 690 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDAC9-215ENST00000441986 RNF113AO15541 343 aaKnown RBP7.28□□□□□ -1.24
HDAC9-215ENST00000441986 PRDM1O75626 825 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 PARNO95453 639 aaKnown RBP7.28□□□□□ -1.24
HDAC9-215ENST00000441986 CHGBP05060 677 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 ALADP13716 330 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 GGCXP38435 758 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 KCNJ6P48051 423 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 MRPL12P52815 198 aaKnown RBP7.28□□□□□ -1.24
HDAC9-215ENST00000441986 SH3BP2P78314 561 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 PURAQ00577 322 aaKnown RBP7.28□□□□□ -1.24
HDAC9-215ENST00000441986 GRB10Q13322 594 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 ELOAQ14241 798 aaKnown RBP7.28□□□□□ -1.24
HDAC9-215ENST00000441986 AGERQ15109 404 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 NBPF20Q3BBV1 942 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 FAM47CQ5HY64 1035 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 DIEXFQ68CQ4 756 aaKnown RBP7.28□□□□□ -1.24
HDAC9-215ENST00000441986 NSMFQ6X4W1 530 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 FBXO16Q8IX29 292 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-215ENST00000441986 SIRT2Q8IXJ6 389 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 IFNL3Q8IZI9 196 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 LRRC47Q8N1G4 583 aaKnown RBP7.28□□□□□ -1.24
HDAC9-215ENST00000441986 KBTBD3Q8NAB2 608 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 MORC4Q8TE76 937 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 APPBP2Q92624 585 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 OSBP2Q969R2 916 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 LRRCC1Q9C099 1032 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms