RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 PNMA1Q8ND90 353 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 SYTL5Q8TDW5 730 aaPredicted RBP6.95□□□□□ -1.3
PTPRR-204ENST00000440835 MTMR8Q96EF0 704 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 ZSCAN10Q96SZ4 725 aaPredicted RBP6.95□□□□□ -1.3
PTPRR-204ENST00000440835 AMNQ9BXJ7 453 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 FAM50BQ9Y247 325 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 UQCRHLA0A096LP55 91 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 VGLL3A8MV65 326 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 TLL1O43897 1013 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 CA3P07451 260 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 UQCRHP07919 91 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 GNAT1P11488 350 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 CYP2C9P11712 490 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 PSEN2P49810 448 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 WDR5P61964 334 aaKnown RBP6.95□□□□□ -1.3
PTPRR-204ENST00000440835 IMMTQ16891 758 aaKnown RBP6.95□□□□□ -1.3
PTPRR-204ENST00000440835 RRP12Q5JTH9 1297 aaKnown RBP6.95□□□□□ -1.3
PTPRR-204ENST00000440835 VPS53Q5VIR6 699 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 C7orf31Q8N865 590 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 APBB2Q92870 758 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 SCLYQ96I15 445 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 TGS1Q96RS0 853 aaKnown RBP6.95□□□□□ -1.3
PTPRR-204ENST00000440835 RMDN3Q96TC7 470 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 MTA3Q9BTC8 594 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 DDX41Q9UJV9 622 aaKnown RBP6.95□□□□□ -1.3
PTPRR-204ENST00000440835 A0A0D9SFI3 127 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 SDSP20132 328 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 SMARCA1P28370 1054 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 NMIQ13287 307 aaPredicted RBP6.94□□□□□ -1.3
PTPRR-204ENST00000440835 PTPROQ16827 1216 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 ARHGEF16Q5VV41 709 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 STOX1Q6ZVD7 989 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 FAM177A1Q8N128 213 aaPredicted RBP6.94□□□□□ -1.3
PTPRR-204ENST00000440835 GPATCH11Q8N954 259 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 GIMAP8Q8ND71 665 aaPredicted RBP6.94□□□□□ -1.3
PTPRR-204ENST00000440835 SP7Q8TDD2 431 aaPredicted RBP6.94□□□□□ -1.3
PTPRR-204ENST00000440835 FAM122AQ96E09 287 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 MAP3K14Q99558 947 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 LNPKQ9C0E8 428 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 LMAN2LQ9H0V9 348 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 PXMP2Q9NR77 195 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 RWDD3Q9Y3V2 267 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 INSL6Q9Y581 213 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 FRMPD2Q68DX3 1309 aaPredicted RBP6.94□□□□□ -1.3
PTPRR-204ENST00000440835 GPR37L1O60883 481 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 AMHP03971 560 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 HOXC8P31273 242 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 RABGGTBP53611 331 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 SNAP25P60880 206 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 FAM193AP78312 1265 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 MFSD10Q14728 455 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 ADGRF4Q8IZF3 695 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 OTUD7AQ8TE49 926 aaPredicted RBP6.94□□□□□ -1.3
PTPRR-204ENST00000440835 AFG1LQ8WV93 481 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 KAT2BQ92831 832 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 HCN4Q9Y3Q4 1203 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 FRMPD4Q14CM0 1322 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 MYH7BA7E2Y1 1941 aa6.94□□□□□ -1.3
PTPRR-204ENST00000440835 MICAL3Q7RTP6 2002 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 LGR5O75473 907 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 GJB5O95377 273 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 NR3C2P08235 984 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 CKBP12277 381 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 CCND2P30279 289 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 ICAM3P32942 547 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 TRIM71Q2Q1W2 868 aaKnown RBP6.93□□□□□ -1.3
PTPRR-204ENST00000440835 GNPTABQ3T906 1256 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 LEXMQ3ZCV2 418 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 TIGD5Q53EQ6 642 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 DEFB128Q7Z7B8 93 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 RPAINQ86UA6 219 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 FAM227BQ96M60 508 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 PPP1R9BQ96SB3 815 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 DIAPH3Q9NSV4 1193 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 PRKAG3Q9UGI9 489 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 TRIP12Q14669 1992 aaPredicted RBP6.93□□□□□ -1.3
PTPRR-204ENST00000440835 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.93□□□□□ -1.3
PTPRR-204ENST00000440835 ZBTB5O15062 677 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 HTRA4P83105 476 aaPredicted RBP6.93□□□□□ -1.3
PTPRR-204ENST00000440835 GRB10Q13322 594 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 QRICH1Q2TAL8 776 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 CELF3Q5SZQ8 465 aaKnown RBP6.93□□□□□ -1.3
PTPRR-204ENST00000440835 GDF6Q6KF10 455 aaPredicted RBP6.93□□□□□ -1.3
PTPRR-204ENST00000440835 SERINC5Q86VE9 423 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 VSIG10LQ86VR7 867 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 TBC1D10CQ8IV04 446 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 PLCD3Q8N3E9 789 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 PPM1EQ8WY54 764 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 ANP32BQ92688 251 aaKnown RBP6.93□□□□□ -1.3
PTPRR-204ENST00000440835 TAAR1Q96RJ0 339 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 LZTS2Q9BRK4 669 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 UBAC1Q9BSL1 405 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 ZBED2Q9BTP6 218 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 JMJD4Q9H9V9 463 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 MRVI1Q9Y6F6 885 aa6.93□□□□□ -1.3
PTPRR-204ENST00000440835 TRIM6-TRIM34B2RNG4 842 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 ARIH2O95376 493 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 MKRN4PQ13434 485 aaPredicted RBP6.92□□□□□ -1.3
PTPRR-204ENST00000440835 NEDD9Q14511 834 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 CCDC85BQ15834 202 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms