RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 FGBP02675 491 aa22.84■■□□□ 1.25
SHROOM1-204ENST00000440118 TGFB3P10600 412 aa22.84■■□□□ 1.25
SHROOM1-204ENST00000440118 BFSP2Q13515 415 aa22.84■■□□□ 1.25
SHROOM1-204ENST00000440118 TSGA10IPQ3SY00 556 aa22.84■■□□□ 1.25
SHROOM1-204ENST00000440118 CELF3Q5SZQ8 465 aaKnown RBP22.84■■□□□ 1.25
SHROOM1-204ENST00000440118 OTOP2Q7RTS6 562 aa22.84■■□□□ 1.25
SHROOM1-204ENST00000440118 JAKMIP1Q96N16 626 aaKnown RBP22.84■■□□□ 1.25
SHROOM1-204ENST00000440118 RTEL1Q9NZ71 1219 aa22.84■■□□□ 1.25
SHROOM1-204ENST00000440118 SPDYE3A6NKU9 549 aa22.83■■□□□ 1.25
SHROOM1-204ENST00000440118 ZBBXA8MT70 800 aa22.83■■□□□ 1.25
SHROOM1-204ENST00000440118 PIK3CDO00329 1044 aa22.83■■□□□ 1.25
SHROOM1-204ENST00000440118 PSEN2P49810 448 aa22.83■■□□□ 1.25
SHROOM1-204ENST00000440118 MFSD10Q14728 455 aa22.83■■□□□ 1.25
SHROOM1-204ENST00000440118 MYSM1Q5VVJ2 828 aa22.83■■□□□ 1.25
SHROOM1-204ENST00000440118 C16orf59Q7L2K0 433 aa22.83■■□□□ 1.25
SHROOM1-204ENST00000440118 DEFB128Q7Z7B8 93 aa22.83■■□□□ 1.25
SHROOM1-204ENST00000440118 GPKOWQ92917 476 aaPredicted RBP eCLIP22.83■■□□□ 1.25
SHROOM1-204ENST00000440118 GBF1Q92538 1859 aa22.83■■□□□ 1.24
SHROOM1-204ENST00000440118 FIBPO43427 364 aa22.82■■□□□ 1.24
SHROOM1-204ENST00000440118 DNAJB2P25686 324 aa22.82■■□□□ 1.24
SHROOM1-204ENST00000440118 EXOSC10Q01780 885 aaKnown RBP22.82■■□□□ 1.24
SHROOM1-204ENST00000440118 KIAA0753Q2KHM9 967 aa22.82■■□□□ 1.24
SHROOM1-204ENST00000440118 BLOC1S2Q6QNY1 142 aa22.82■■□□□ 1.24
SHROOM1-204ENST00000440118 NLRX1Q86UT6 975 aa22.82■■□□□ 1.24
SHROOM1-204ENST00000440118 EHMT1Q9H9B1 1298 aa22.82■■□□□ 1.24
SHROOM1-204ENST00000440118 CNTNAP5Q8WYK1 1306 aa22.82■■□□□ 1.24
SHROOM1-204ENST00000440118 PITPNM1O00562 1244 aa22.81■■□□□ 1.24
SHROOM1-204ENST00000440118 F2P00734 622 aa22.81■■□□□ 1.24
SHROOM1-204ENST00000440118 PFKMP08237 780 aa22.81■■□□□ 1.24
SHROOM1-204ENST00000440118 NAPAP54920 295 aa22.81■■□□□ 1.24
SHROOM1-204ENST00000440118 NEDD9Q14511 834 aa22.81■■□□□ 1.24
SHROOM1-204ENST00000440118 HSDL1Q3SXM5 330 aa22.81■■□□□ 1.24
SHROOM1-204ENST00000440118 PCNX4Q63HM2 1172 aa22.81■■□□□ 1.24
SHROOM1-204ENST00000440118 XRRA1Q6P2D8 792 aa22.81■■□□□ 1.24
SHROOM1-204ENST00000440118 HERVK_113Q902F9 699 aa22.81■■□□□ 1.24
SHROOM1-204ENST00000440118 KAT2BQ92831 832 aa22.81■■□□□ 1.24
SHROOM1-204ENST00000440118 GUCD1Q96NT3 240 aa22.81■■□□□ 1.24
SHROOM1-204ENST00000440118 BRPF3Q9ULD4 1205 aa22.81■■□□□ 1.24
SHROOM1-204ENST00000440118 TMEM265A0A087WTH1 108 aa22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 MEIS2O14770 477 aa22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 PPFIA4O75335 1185 aa22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 ACTN1P12814 892 aa22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 HSPA4P34932 840 aa22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 RFC2P35250 354 aa22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 MRPS9P82933 396 aaKnown RBP22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 SP2Q02086 613 aa22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 UBE2SQ16763 222 aa22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 GDF6Q6KF10 455 aaPredicted RBP22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 SESTD1Q86VW0 696 aa22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 TIFAQ96CG3 184 aa22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 INPP4AQ96PE3 977 aaPredicted RBP22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 FTOQ9C0B1 505 aaKnown RBP eCLIP22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 SEMA6BQ9H3T3 888 aa22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 HDAC6Q9UBN7 1215 aa22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 GTF2IRD1Q9UHL9 959 aa22.8■■□□□ 1.24
SHROOM1-204ENST00000440118 CPA1P15085 419 aa22.79■■□□□ 1.24
SHROOM1-204ENST00000440118 METAP2P50579 478 aaKnown RBP eCLIP22.79■■□□□ 1.24
SHROOM1-204ENST00000440118 SP4Q02446 784 aa22.79■■□□□ 1.24
SHROOM1-204ENST00000440118 Q6ZUG5 572 aa22.79■■□□□ 1.24
SHROOM1-204ENST00000440118 CAGE1Q8TC20 777 aa22.79■■□□□ 1.24
SHROOM1-204ENST00000440118 MSRAQ9UJ68 235 aa22.79■■□□□ 1.24
SHROOM1-204ENST00000440118 SLC4A7Q9Y6M7 1214 aa22.79■■□□□ 1.24
SHROOM1-204ENST00000440118 CCDC196A0A1B0GTZ2 297 aa22.78■■□□□ 1.24
SHROOM1-204ENST00000440118 PSMA5P28066 241 aa22.78■■□□□ 1.24
SHROOM1-204ENST00000440118 ICAM3P32942 547 aa22.78■■□□□ 1.24
SHROOM1-204ENST00000440118 RAB30Q15771 203 aa22.78■■□□□ 1.24
SHROOM1-204ENST00000440118 WWC2Q6AWC2 1192 aa22.78■■□□□ 1.24
SHROOM1-204ENST00000440118 METTL7BQ6UX53 244 aa22.78■■□□□ 1.24
SHROOM1-204ENST00000440118 CYFIP1Q7L576 1253 aa22.78■■□□□ 1.24
SHROOM1-204ENST00000440118 SLC17A8Q8NDX2 589 aa22.78■■□□□ 1.24
SHROOM1-204ENST00000440118 CXXC1Q9P0U4 656 aaPredicted RBP22.78■■□□□ 1.24
SHROOM1-204ENST00000440118 SNX14Q9Y5W7 946 aa22.78■■□□□ 1.24
SHROOM1-204ENST00000440118 MYO9BQ13459 2157 aa22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 KAT6AQ92794 2004 aa22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 GRXCR1A8MXD5 290 aa22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 SPATA31C2B4DYI2 1134 aa22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 ADCY7P51828 1080 aa22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 RCAN1P53805 252 aa22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 APOBRQ0VD83 1088 aa22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 RASIP1Q5U651 963 aa22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 PPP1R18Q6NYC8 613 aa22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 GIMAP8Q8ND71 665 aaPredicted RBP22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 AFAP1L1Q8TED9 768 aa22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 BRF1Q92994 677 aa22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 CDHR1Q96JP9 859 aa22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 CDX2Q99626 313 aaPredicted RBP22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 TTYH1Q9H313 450 aaPredicted RBP22.77■■□□□ 1.24
SHROOM1-204ENST00000440118 hCG_1984214I3L0E3 225 aa22.76■■□□□ 1.23
SHROOM1-204ENST00000440118 LGALS2P05162 132 aa22.76■■□□□ 1.23
SHROOM1-204ENST00000440118 IQCF3P0C7M6 154 aa22.76■■□□□ 1.23
SHROOM1-204ENST00000440118 HOXD8P13378 290 aaPredicted RBP22.76■■□□□ 1.23
SHROOM1-204ENST00000440118 FOSL2P15408 326 aa22.76■■□□□ 1.23
SHROOM1-204ENST00000440118 ZNF713Q8N859 430 aaPredicted RBP22.76■■□□□ 1.23
SHROOM1-204ENST00000440118 PBX4Q9BYU1 374 aa22.76■■□□□ 1.23
SHROOM1-204ENST00000440118 ZNF215Q9UL58 517 aaPredicted RBP22.76■■□□□ 1.23
SHROOM1-204ENST00000440118 V9GY48 417 aaPredicted RBP22.76■■□□□ 1.23
SHROOM1-204ENST00000440118 A0A0C4DFX4 3053 aa22.76■■□□□ 1.23
SHROOM1-204ENST00000440118 H3BRB1 525 aa22.75■■□□□ 1.23
SHROOM1-204ENST00000440118 SELPP16109 830 aa22.75■■□□□ 1.23
SHROOM1-204ENST00000440118 PBX2P40425 430 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms