RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ERO1AQ96HE7 468 aa23.4■■□□□ 1.34
CHD3-204ENST00000439235 TRIM47Q96LD4 638 aa23.4■■□□□ 1.34
CHD3-204ENST00000439235 RAB34Q9BZG1 259 aa23.4■■□□□ 1.34
CHD3-204ENST00000439235 TCHHQ07283 1943 aa23.39■■□□□ 1.34
CHD3-204ENST00000439235 A0A1W2PQ27 194 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 A0A1W2PQ64 194 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 A0A1W2PQD8 194 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 VWA3AA6NCI4 1184 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 FKTNO75072 461 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 CTGFP29279 349 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 LONP1P36776 959 aaKnown RBP23.39■■□□□ 1.33
CHD3-204ENST00000439235 TXKP42681 527 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 ARHGEF6Q15052 776 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 AXDND1Q5T1B0 1012 aaPredicted RBP23.39■■□□□ 1.33
CHD3-204ENST00000439235 MAMDC4Q6UXC1 1216 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 ARMCX2Q7L311 632 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 NPLOC4Q8TAT6 608 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 HAS1Q92839 578 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 ZNF577Q9BSK1 485 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 WDR11Q9BZH6 1224 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 ARHGAP39Q9C0H5 1083 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 KCNH7Q9NS40 1196 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 GJD2Q9UKL4 321 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 LRRC37A2A6NM11 1700 aa23.39■■□□□ 1.33
CHD3-204ENST00000439235 SYNGAP1Q96PV0 1343 aa23.38■■□□□ 1.33
CHD3-204ENST00000439235 ARP10275 920 aa23.38■■□□□ 1.33
CHD3-204ENST00000439235 FXR2P51116 673 aaKnown RBP eCLIP23.38■■□□□ 1.331e-6■■■□□ 15.9
CHD3-204ENST00000439235 SLC5A5Q92911 643 aa23.38■■□□□ 1.33
CHD3-204ENST00000439235 TTC12Q9H892 705 aaPredicted RBP23.38■■□□□ 1.33
CHD3-204ENST00000439235 AGO4Q9HCK5 861 aaKnown RBP23.38■■□□□ 1.33
CHD3-204ENST00000439235 GADD45BO75293 160 aaPredicted RBP23.37■■□□□ 1.33
CHD3-204ENST00000439235 GNRH1P01148 92 aa23.37■■□□□ 1.33
CHD3-204ENST00000439235 HOXD10P28358 340 aa23.37■■□□□ 1.33
CHD3-204ENST00000439235 ICAM3P32942 547 aa23.37■■□□□ 1.33
CHD3-204ENST00000439235 CD99L2Q8TCZ2 262 aa23.37■■□□□ 1.33
CHD3-204ENST00000439235 AK8Q96MA6 479 aa23.37■■□□□ 1.33
CHD3-204ENST00000439235 CLIC6Q96NY7 704 aa23.37■■□□□ 1.33
CHD3-204ENST00000439235 RIT2Q99578 217 aa23.37■■□□□ 1.33
CHD3-204ENST00000439235 CSRNP2Q9H175 543 aa23.37■■□□□ 1.33
CHD3-204ENST00000439235 VTA1Q9NP79 307 aa23.37■■□□□ 1.33
CHD3-204ENST00000439235 PCDHA12Q9UN75 941 aa23.37■■□□□ 1.33
CHD3-204ENST00000439235 MGAMO43451 1857 aa23.36■■□□□ 1.33
CHD3-204ENST00000439235 PLXNA1Q9UIW2 1896 aa23.36■■□□□ 1.33
CHD3-204ENST00000439235 IPO5O00410 1097 aaKnown RBP23.36■■□□□ 1.33
CHD3-204ENST00000439235 RGS20O76081 388 aa23.36■■□□□ 1.33
CHD3-204ENST00000439235 MBD3O95983 291 aa23.36■■□□□ 1.33
CHD3-204ENST00000439235 CYP2B6P20813 491 aa23.36■■□□□ 1.33
CHD3-204ENST00000439235 IL17AQ16552 155 aa23.36■■□□□ 1.33
CHD3-204ENST00000439235 LRCH2Q5VUJ6 765 aa23.36■■□□□ 1.33
CHD3-204ENST00000439235 OLFML2BQ68BL8 750 aa23.36■■□□□ 1.33
CHD3-204ENST00000439235 KCNV1Q6PIU1 500 aa23.36■■□□□ 1.33
CHD3-204ENST00000439235 MRPS27Q92552 414 aaKnown RBP23.36■■□□□ 1.33
CHD3-204ENST00000439235 TINF2Q9BSI4 451 aa23.36■■□□□ 1.33
CHD3-204ENST00000439235 TEKT3Q9BXF9 490 aa23.36■■□□□ 1.33
CHD3-204ENST00000439235 WBP1LQ9NX94 342 aa23.36■■□□□ 1.33
CHD3-204ENST00000439235 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.36■■□□□ 1.33
CHD3-204ENST00000439235 TCEAL9Q9UHQ7 104 aa23.36■■□□□ 1.33
CHD3-204ENST00000439235 DDX49Q9Y6V7 483 aaKnown RBP23.36■■□□□ 1.33
CHD3-204ENST00000439235 SPATA31C2B4DYI2 1134 aa23.35■■□□□ 1.33
CHD3-204ENST00000439235 GAS7O60861 476 aa23.35■■□□□ 1.33
CHD3-204ENST00000439235 XRCC5P13010 732 aaKnown RBP23.35■■□□□ 1.33
CHD3-204ENST00000439235 CMA1P23946 247 aa23.35■■□□□ 1.33
CHD3-204ENST00000439235 TECP42680 631 aa23.35■■□□□ 1.33
CHD3-204ENST00000439235 GRIN1Q05586 938 aa23.35■■□□□ 1.33
CHD3-204ENST00000439235 TPRNQ4KMQ1 711 aa23.35■■□□□ 1.33
CHD3-204ENST00000439235 SEPT14Q6ZU15 432 aa23.35■■□□□ 1.33
CHD3-204ENST00000439235 TBC1D22BQ9NU19 505 aa23.35■■□□□ 1.33
CHD3-204ENST00000439235 FAM13BQ9NYF5 915 aa23.35■■□□□ 1.33
CHD3-204ENST00000439235 ZNFX1Q9P2E3 1918 aaKnown RBP23.35■■□□□ 1.33
CHD3-204ENST00000439235 PSMD10O75832 226 aa23.34■■□□□ 1.33
CHD3-204ENST00000439235 TXLNAP40222 546 aa23.34■■□□□ 1.33
CHD3-204ENST00000439235 PDIA5Q14554 519 aa23.34■■□□□ 1.33
CHD3-204ENST00000439235 RESP18Q5W5W9 173 aa23.34■■□□□ 1.33
CHD3-204ENST00000439235 SHC4Q6S5L8 630 aa23.34■■□□□ 1.33
CHD3-204ENST00000439235 CCDC73Q6ZRK6 1079 aa23.34■■□□□ 1.33
CHD3-204ENST00000439235 EEPD1Q7L9B9 569 aa23.34■■□□□ 1.33
CHD3-204ENST00000439235 FBXO16Q8IX29 292 aaPredicted RBP23.34■■□□□ 1.33
CHD3-204ENST00000439235 TRMT44Q8IYL2 757 aaKnown RBP23.34■■□□□ 1.33
CHD3-204ENST00000439235 IGSF22Q8N9C0 903 aa23.34■■□□□ 1.33
CHD3-204ENST00000439235 FSIP1Q8NA03 581 aa23.34■■□□□ 1.33
CHD3-204ENST00000439235 ZNF296Q8WUU4 475 aaPredicted RBP23.34■■□□□ 1.33
CHD3-204ENST00000439235 SDF4Q9BRK5 362 aa23.34■■□□□ 1.33
CHD3-204ENST00000439235 TGFB3P10600 412 aa23.33■■□□□ 1.33
CHD3-204ENST00000439235 FLT3LGP49771 235 aa23.33■■□□□ 1.33
CHD3-204ENST00000439235 PRKCZQ05513 592 aa23.33■■□□□ 1.33
CHD3-204ENST00000439235 SEMA3FQ13275 785 aa23.33■■□□□ 1.33
CHD3-204ENST00000439235 IRF5Q13568 498 aa23.33■■□□□ 1.33
CHD3-204ENST00000439235 GJA10Q969M2 543 aa23.33■■□□□ 1.33
CHD3-204ENST00000439235 UIMC1Q96RL1 719 aa23.33■■□□□ 1.33
CHD3-204ENST00000439235 ABHD16BQ9H3Z7 469 aa23.33■■□□□ 1.33
CHD3-204ENST00000439235 PKD2L1Q9P0L9 805 aa23.33■■□□□ 1.33
CHD3-204ENST00000439235 LRWD1Q9UFC0 647 aa23.33■■□□□ 1.33
CHD3-204ENST00000439235 GABRQQ9UN88 632 aa23.33■■□□□ 1.33
CHD3-204ENST00000439235 STK24Q9Y6E0 443 aa23.33■■□□□ 1.33
CHD3-204ENST00000439235 ZSWIM8A7E2V4 1837 aa23.33■■□□□ 1.32
CHD3-204ENST00000439235 NFASCO94856 1347 aa23.33■■□□□ 1.32
CHD3-204ENST00000439235 ITGB3BPQ13352 177 aaPredicted RBP23.32■■□□□ 1.32
CHD3-204ENST00000439235 PPP2R5CQ13362 524 aa23.32■■□□□ 1.32
CHD3-204ENST00000439235 GIMAP8Q8ND71 665 aaPredicted RBP23.32■■□□□ 1.32
CHD3-204ENST00000439235 SCFD2Q8WU76 684 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms