RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 RGS2P41220 211 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 FXR2P51116 673 aaKnown RBP eCLIP11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 SETQ01105 290 aaPredicted RBP11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 GRIN1Q05586 938 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 MTMR1Q13613 665 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 TPRNQ4KMQ1 711 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 MSL3Q8N5Y2 521 aaKnown RBP11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 SOCS4Q8WXH5 440 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 GJA10Q969M2 543 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 MAML3Q96JK9 1138 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 CDHR1Q96JP9 859 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 UIMC1Q96RL1 719 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 ZNF577Q9BSK1 485 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 BEGAINQ9BUH8 593 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 CSRNP2Q9H175 543 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 TTC12Q9H892 705 aaPredicted RBP11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 AGO4Q9HCK5 861 aaKnown RBP11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 WBP1LQ9NX94 342 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 A0A0G2JMZ2 1700 aa11.17□□□□□ -0.62
AC004448.3-201ENST00000435953 SMCHD1A6NHR9 2005 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 IPO5O00410 1097 aaKnown RBP11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 DHX15O43143 795 aaKnown RBP11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 FKTNO75072 461 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 ATP9AO75110 1047 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 PSMD10O75832 226 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 SNAI1O95863 264 aaPredicted RBP11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 TGFB3P10600 412 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 XRCC5P13010 732 aaKnown RBP11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 HOXD10P28358 340 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 ARHGEF6Q15052 776 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 GNPTABQ3T906 1256 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 SPECC1Q5M775 1068 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 RESP18Q5W5W9 173 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 SHC4Q6S5L8 630 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 SEPT14Q6ZU15 432 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 ARMCX2Q7L311 632 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 OTOP1Q7RTM1 612 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 AK8Q96MA6 479 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 RIT2Q99578 217 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 TINF2Q9BSI4 451 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 TBC1D22BQ9NU19 505 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 PARP14Q460N5 1801 aa11.16□□□□□ -0.62
AC004448.3-201ENST00000435953 MYH6P13533 1939 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 FAM237AA0A1B0GTK4 181 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 IGHA2P01877 340 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 CAP1Q01518 475 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 SEMA3FQ13275 785 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 ITGB3BPQ13352 177 aaPredicted RBP11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 TMEM266Q2M3C6 531 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 SKOR2Q2VWA4 1001 aaPredicted RBP11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 LRCH2Q5VUJ6 765 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 OLFML2BQ68BL8 750 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 KCNV1Q6PIU1 500 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 USP49Q70CQ1 688 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 EEPD1Q7L9B9 569 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 IGSF22Q8N9C0 903 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 FSIP1Q8NA03 581 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 CD99L2Q8TCZ2 262 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 MRPS27Q92552 414 aaKnown RBP11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 EPSTI1Q96J88 318 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 SENP7Q9BQF6 1050 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 RAB34Q9BZG1 259 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 LRWD1Q9UFC0 647 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 GABRQQ9UN88 632 aa11.15□□□□□ -0.62
AC004448.3-201ENST00000435953 CEP350Q5VT06 3117 aa11.15□□□□□ -0.63
AC004448.3-201ENST00000435953 SYNGAP1Q96PV0 1343 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 A0A1B0GVL5 298 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 RBM47A0AV96 593 aaKnown RBP11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 GAS7O60861 476 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 GNRH1P01148 92 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 KCNA2P16389 499 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 CDC25AP30304 524 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 UBA7P41226 1012 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 FLT3LGP49771 235 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 SP2Q02086 613 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 ACVR2BQ13705 512 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 CCL14Q16627 93 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 TAPT1Q6NXT6 567 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 CCDC62Q6P9F0 684 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 B3GNT9Q6UX72 402 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 ENGASEQ8NFI3 743 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 GPT2Q8TD30 523 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 ZNF296Q8WUU4 475 aaPredicted RBP11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 SYMPKQ92797 1274 aaKnown RBP11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 ERO1AQ96HE7 468 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 TEKT3Q9BXF9 490 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 PANK2Q9BZ23 570 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 CCSER1Q9C0I3 900 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 ABHD16BQ9H3Z7 469 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 VTA1Q9NP79 307 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 FAM13BQ9NYF5 915 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 FLRT1Q9NZU1 646 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 PKD2L1Q9P0L9 805 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 SRRDQ9UH36 339 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 DDX41Q9UJV9 622 aaKnown RBP11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 VAV3Q9UKW4 847 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 HPSEQ9Y251 543 aa11.14□□□□□ -0.63
AC004448.3-201ENST00000435953 PP2D1A8MPX8 630 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 TRAK2O60296 914 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms