RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 DUSP28Q4G0W2 176 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 EARS2Q5JPH6 523 aaKnown RBP18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 TAPT1Q6NXT6 567 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 ZNF333Q96JL9 665 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 ZFP91Q96JP5 570 aaPredicted RBP18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 SENP7Q9BQF6 1050 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 ZNF577Q9BSK1 485 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 KATNBL1Q9H079 304 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 KCNH7Q9NS40 1196 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 TBC1D22BQ9NU19 505 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 DDX20Q9UHI6 824 aaKnown RBP18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 Q9Y3F1 56 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 DDX49Q9Y6V7 483 aaKnown RBP18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 SMCHD1A6NHR9 2005 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 FAM205CA6NFA0 338 aa18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 FAM86B1E9PN63 330 aa18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 TBX3O15119 743 aa18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 NEMFO60524 1076 aa18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 DUSP11O75319 330 aaKnown RBP18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 TDP2O95551 362 aa18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 FAM86B2P0C5J1 330 aa18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 CCND3P30281 292 aaPredicted RBP18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 MCM7P33993 719 aa18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 RESTQ13127 1097 aa18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 FOXD4L5Q5VV16 416 aaPredicted RBP18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 MYSM1Q5VVJ2 828 aa18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 DHX37Q8IY37 1157 aaKnown RBP18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 SLFN12Q8IYM2 578 aa18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 FOXD4L4Q8WXT5 416 aaPredicted RBP18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 FAM20AQ96MK3 541 aa18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 MLXIPQ9HAP2 919 aa18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 PDGFCQ9NRA1 345 aa18.73■□□□□ 0.59
CTDSPL-204ENST00000435525 ZEB2O60315 1214 aa18.72■□□□□ 0.59
CTDSPL-204ENST00000435525 RGS20O76081 388 aa18.72■□□□□ 0.59
CTDSPL-204ENST00000435525 BRD1O95696 1058 aa18.72■□□□□ 0.59
CTDSPL-204ENST00000435525 LAMC2Q13753 1193 aa18.72■□□□□ 0.59
CTDSPL-204ENST00000435525 CALCRLQ16602 461 aa18.72■□□□□ 0.59
CTDSPL-204ENST00000435525 ATL3Q6DD88 541 aa18.72■□□□□ 0.59
CTDSPL-204ENST00000435525 TRPV1Q8NER1 839 aa18.72■□□□□ 0.59
CTDSPL-204ENST00000435525 MBOAT7Q96N66 472 aa18.72■□□□□ 0.59
CTDSPL-204ENST00000435525 DDX41Q9UJV9 622 aaKnown RBP18.72■□□□□ 0.59
CTDSPL-204ENST00000435525 IGLV3-22A0A075B6J6 115 aa18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 IPO5O00410 1097 aaKnown RBP18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 LAD1O00515 517 aa18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 GAS7O60861 476 aa18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 MYCP01106 439 aaPredicted RBP18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 ZNF174Q15697 407 aa18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 CCDC62Q6P9F0 684 aa18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 OR6J1Q8NGC5 347 aa18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 CYP2W1Q8TAV3 490 aa18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 RIT2Q99578 217 aa18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 UNC93B1Q9H1C4 597 aa18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 AGO4Q9HCK5 861 aaKnown RBP18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 XPNPEP3Q9NQH7 507 aa18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 CHMP5Q9NZZ3 219 aa18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 NFASCO94856 1347 aa18.71■□□□□ 0.59
CTDSPL-204ENST00000435525 NOP56O00567 594 aaKnown RBP18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 DYNC1LI2O43237 492 aaPredicted RBP18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 GGPS1O95749 300 aa18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 ARP10275 920 aa18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 SMPD1P17405 629 aa18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 UBA1P22314 1058 aaKnown RBP18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 LY6KQ17RY6 165 aa18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 TMEM266Q2M3C6 531 aa18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 RNF180Q86T96 592 aa18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 TLK2Q86UE8 772 aa18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 ARRDC4Q8NCT1 418 aa18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 TEKT3Q9BXF9 490 aa18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 PKD2L1Q9P0L9 805 aa18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 CFAP45Q9UL16 551 aa18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 ZNFX1Q9P2E3 1918 aaKnown RBP18.7■□□□□ 0.58
CTDSPL-204ENST00000435525 DOCK3Q8IZD9 2030 aa18.69■□□□□ 0.58
CTDSPL-204ENST00000435525 PLXNA1Q9UIW2 1896 aa18.69■□□□□ 0.58
CTDSPL-204ENST00000435525 GJB1P08034 283 aa18.69■□□□□ 0.58
CTDSPL-204ENST00000435525 CPT1AP50416 773 aa18.69■□□□□ 0.58
CTDSPL-204ENST00000435525 MTFR1Q15390 333 aa18.69■□□□□ 0.58
CTDSPL-204ENST00000435525 CELF3Q5SZQ8 465 aaKnown RBP18.69■□□□□ 0.58
CTDSPL-204ENST00000435525 LRCH2Q5VUJ6 765 aa18.69■□□□□ 0.58
CTDSPL-204ENST00000435525 METTL7BQ6UX53 244 aa18.69■□□□□ 0.58
CTDSPL-204ENST00000435525 SPATA33Q96N06 139 aa18.69■□□□□ 0.58
CTDSPL-204ENST00000435525 DEFB118Q96PH6 123 aa18.69■□□□□ 0.58
CTDSPL-204ENST00000435525 RAB34Q9BZG1 259 aa18.69■□□□□ 0.58
CTDSPL-204ENST00000435525 JPH1Q9HDC5 661 aaPredicted RBP18.69■□□□□ 0.58
CTDSPL-204ENST00000435525 PAK6Q9NQU5 681 aaPredicted RBP18.69■□□□□ 0.58
CTDSPL-204ENST00000435525 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 MSH4O15457 936 aa18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 SLC37A4O43826 429 aa18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 OR52Z1P0C646 297 aa18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 KRT76Q01546 638 aa18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 CYFIP1Q7L576 1253 aa18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 POTEDQ86YR6 584 aa18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 SLC5A5Q92911 643 aa18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 EMID1Q96A84 441 aaPredicted RBP18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 LENG9Q96B70 501 aa18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 SLC9A2Q9UBY0 812 aa18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 GNEQ9Y223 722 aaKnown RBP18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 PCDHB6Q9Y5E3 794 aa18.68■□□□□ 0.58
CTDSPL-204ENST00000435525 KPNA6O60684 536 aa18.67■□□□□ 0.58
CTDSPL-204ENST00000435525 ARIH2O95376 493 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms