RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 C17orf80Q9BSJ5 609 aa13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 JMJD4Q9H9V9 463 aa13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 C11orf16Q9NQ32 467 aa13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 TRANK1O15050 2925 aa13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.52□□□□□ -0.25
CHRNA1-207ENST00000435083 B4E1Z4 1266 aa13.52□□□□□ -0.25
CHRNA1-207ENST00000435083 PI4K2BG5E9Z4 385 aa13.52□□□□□ -0.25
CHRNA1-207ENST00000435083 PARP1P09874 1014 aaKnown RBP13.52□□□□□ -0.25
CHRNA1-207ENST00000435083 MBTPS1Q14703 1052 aa13.52□□□□□ -0.25
CHRNA1-207ENST00000435083 MYOCDQ8IZQ8 938 aa13.52□□□□□ -0.25
CHRNA1-207ENST00000435083 DBF4BQ8NFT6 615 aa13.52□□□□□ -0.25
CHRNA1-207ENST00000435083 ZSCAN10Q96SZ4 725 aaPredicted RBP13.52□□□□□ -0.25
CHRNA1-207ENST00000435083 INSL6Q9Y581 213 aa13.52□□□□□ -0.25
CHRNA1-207ENST00000435083 AMHP03971 560 aa13.51□□□□□ -0.25
CHRNA1-207ENST00000435083 SDSP20132 328 aa13.51□□□□□ -0.25
CHRNA1-207ENST00000435083 THPOP40225 353 aa13.51□□□□□ -0.25
CHRNA1-207ENST00000435083 HIC1Q14526 733 aa13.51□□□□□ -0.25
CHRNA1-207ENST00000435083 LEXMQ3ZCV2 418 aa13.51□□□□□ -0.25
CHRNA1-207ENST00000435083 FAM178BQ8IXR5 827 aa13.51□□□□□ -0.25
CHRNA1-207ENST00000435083 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.51□□□□□ -0.25
CHRNA1-207ENST00000435083 ANKS1AQ92625 1134 aa13.51□□□□□ -0.25
CHRNA1-207ENST00000435083 SPATA33Q96N06 139 aa13.51□□□□□ -0.25
CHRNA1-207ENST00000435083 RSPH10B2B2RC85 870 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 PPFIA4O75335 1185 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 GGPS1O95749 300 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 RSPH10BP0C881 870 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 IL9P15248 144 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 SSTR3P32745 418 aaPredicted RBP13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 HSD17B4P51659 736 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 HSDL1Q3SXM5 330 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 CELF3Q5SZQ8 465 aaKnown RBP13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 GJD3Q8N144 294 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 ENAHQ8N8S7 591 aaPredicted RBP13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 PDCD2LQ9BRP1 358 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 AMNQ9BXJ7 453 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 LNPKQ9C0E8 428 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 ZSWIM5Q9P217 1185 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 XIRP2A4UGR9 3374 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 EMSYQ7Z589 1322 aa13.5□□□□□ -0.25
CHRNA1-207ENST00000435083 RGS20O76081 388 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 HOXD8P13378 290 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 NT5C2P49902 561 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 PTCRAQ6ISU1 281 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 KCNV1Q6PIU1 500 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 CWC27Q6UX04 472 aaKnown RBP13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 SERINC5Q86VE9 423 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 MRPL38Q96DV4 380 aaKnown RBP13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 ZFP91Q96JP5 570 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 CTNNA3Q9UI47 895 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 LAMA4Q16363 1823 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 C17orf102A2RUQ5 167 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 OPLAHO14841 1288 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 UPP2O95045 317 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 HOXA13P31271 388 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 HTRA4P83105 476 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 HDAC1Q13547 482 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 PTPROQ16827 1216 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 EP400NLQ6ZTU2 488 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 STAG2Q8N3U4 1231 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 ATP6V0A1Q93050 837 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 UBAC1Q9BSL1 405 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 MLXIPQ9HAP2 919 aa13.49□□□□□ -0.25
CHRNA1-207ENST00000435083 MICAL3Q7RTP6 2002 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 KLRF2D3W0D1 207 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 SP2Q02086 613 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 PGM5Q15124 567 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 IMMTQ16891 758 aaKnown RBP13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 EPC2Q52LR7 807 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 PLEKHG4Q58EX7 1191 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 STOX1Q6ZVD7 989 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 VSIG10LQ86VR7 867 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 IL31RAQ8NI17 732 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 SEPT8Q92599 483 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 SAMD11Q96NU1 681 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 UIMC1Q96RL1 719 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 YME1L1Q96TA2 773 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 C16orf70Q9BSU1 422 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 DIAPH3Q9NSV4 1193 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 MAP3K20Q9NYL2 800 aaKnown RBP13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 PCDHA1Q9Y5I3 950 aa13.48□□□□□ -0.25
CHRNA1-207ENST00000435083 BRWD1Q9NSI6 2320 aa13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 GRXCR2A6NFK2 248 aa13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 PRR33A8MZF0 331 aa13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 H3BQ06 376 aaPredicted RBP13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 H3BRB1 525 aa13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 PPP1R11O60927 126 aaPredicted RBP13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 CTSHP09668 335 aa13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 UBA1P22314 1058 aaKnown RBP13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 CCND2P30279 289 aa13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 RRP1P56182 461 aaKnown RBP13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 GPM6BQ13491 265 aa13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 IFIT1BQ5T764 474 aaKnown RBP13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 B4GALNT3Q6L9W6 998 aa13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 FCHSD1Q86WN1 690 aa13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 GPKOWQ92917 476 aaPredicted RBP eCLIP13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 KRT23Q9C075 422 aa13.47□□□□□ -0.25
CHRNA1-207ENST00000435083 TUT1Q9H6E5 874 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms