RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 MICU3Q86XE3 530 aa18.19■□□□□ 0.5
NUP50-210ENST00000434760 ZFP91Q96JP5 570 aaPredicted RBP18.19■□□□□ 0.5
NUP50-210ENST00000434760 COL4A4P53420 1690 aaPredicted RBP18.18■□□□□ 0.5
NUP50-210ENST00000434760 GGPS1O95749 300 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 CALM1P0DP23 149 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 CALM2P0DP24 149 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 CALM3P0DP25 149 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 CASTP20810 708 aaKnown RBP18.18■□□□□ 0.5
NUP50-210ENST00000434760 RBL2Q08999 1139 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 RNF20Q5VTR2 975 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 KCNV1Q6PIU1 500 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 USP17L6PQ6QN14 398 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 OTOP2Q7RTS6 562 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 DHX37Q8IY37 1157 aaKnown RBP18.18■□□□□ 0.5
NUP50-210ENST00000434760 MYLIPQ8WY64 445 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 TIFAQ96CG3 184 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 TCEANC2Q96MN5 208 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 SEC63Q9UGP8 760 aaKnown RBP18.18■□□□□ 0.5
NUP50-210ENST00000434760 GTF2IRD1Q9UHL9 959 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 SLC12A7Q9Y666 1083 aa18.18■□□□□ 0.5
NUP50-210ENST00000434760 FGBP02675 491 aa18.17■□□□□ 0.5
NUP50-210ENST00000434760 PFKMP08237 780 aa18.17■□□□□ 0.5
NUP50-210ENST00000434760 TGFB3P10600 412 aa18.17■□□□□ 0.5
NUP50-210ENST00000434760 ICAM3P32942 547 aa18.17■□□□□ 0.5
NUP50-210ENST00000434760 PSEN2P49810 448 aa18.17■□□□□ 0.5
NUP50-210ENST00000434760 FUT2Q10981 343 aa18.17■□□□□ 0.5
NUP50-210ENST00000434760 MFSD10Q14728 455 aa18.17■□□□□ 0.5
NUP50-210ENST00000434760 NEK1Q96PY6 1258 aa18.17■□□□□ 0.5
NUP50-210ENST00000434760 BCAS3Q9H6U6 928 aa18.17■□□□□ 0.5
NUP50-210ENST00000434760 MUC3AQ02505 3323 aa18.17■□□□□ 0.5
NUP50-210ENST00000434760 hCG_1642624A0A1W2PR95 340 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 SORBS3O60504 671 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 STAM2O75886 525 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 IQCF3P0C7M6 154 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 HOXC8P31273 242 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 RFC2P35250 354 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 HIC1Q14526 733 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 GRIN2CQ14957 1233 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 PTGISQ16647 500 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 KIAA0753Q2KHM9 967 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 PCNX4Q63HM2 1172 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 FANCBQ8NB91 859 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 KCNB2Q92953 911 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 SPATA33Q96N06 139 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 C16orf70Q9BSU1 422 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 KATNAL1Q9BW62 490 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 MTIF3Q9H2K0 278 aaKnown RBP18.16■□□□□ 0.5
NUP50-210ENST00000434760 HDAC6Q9UBN7 1215 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 BRPF3Q9ULD4 1205 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 XIRP2A4UGR9 3374 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 NID2Q14112 1375 aa18.16■□□□□ 0.5
NUP50-210ENST00000434760 CHMP4BP1P59074 171 aa18.15■□□□□ 0.5
NUP50-210ENST00000434760 GPNMBQ14956 572 aa18.15■□□□□ 0.5
NUP50-210ENST00000434760 TRIM71Q2Q1W2 868 aaKnown RBP18.15■□□□□ 0.5
NUP50-210ENST00000434760 DHX32Q7L7V1 743 aaKnown RBP18.15■□□□□ 0.5
NUP50-210ENST00000434760 SLC17A8Q8NDX2 589 aa18.15■□□□□ 0.5
NUP50-210ENST00000434760 CAGE1Q8TC20 777 aa18.15■□□□□ 0.5
NUP50-210ENST00000434760 WNT8BQ93098 351 aa18.15■□□□□ 0.5
NUP50-210ENST00000434760 CCDC136Q96JN2 1154 aa18.15■□□□□ 0.5
NUP50-210ENST00000434760 ZNF576Q9H609 170 aa18.15■□□□□ 0.5
NUP50-210ENST00000434760 YBX2Q9Y2T7 364 aaKnown RBP18.15■□□□□ 0.5
NUP50-210ENST00000434760 SPATA31C2B4DYI2 1134 aa18.14■□□□□ 0.49
NUP50-210ENST00000434760 FIBPO43427 364 aa18.14■□□□□ 0.49
NUP50-210ENST00000434760 BFSP2Q13515 415 aa18.14■□□□□ 0.49
NUP50-210ENST00000434760 UBE2SQ16763 222 aa18.14■□□□□ 0.49
NUP50-210ENST00000434760 GNPTABQ3T906 1256 aa18.14■□□□□ 0.49
NUP50-210ENST00000434760 TYW1BQ6NUM6 668 aa18.14■□□□□ 0.49
NUP50-210ENST00000434760 TRAF7Q6Q0C0 670 aa18.14■□□□□ 0.49
NUP50-210ENST00000434760 DEFB128Q7Z7B8 93 aa18.14■□□□□ 0.49
NUP50-210ENST00000434760 RPUSD2Q8IZ73 545 aaKnown RBP18.14■□□□□ 0.49
NUP50-210ENST00000434760 SMARCC2Q8TAQ2 1214 aa18.14■□□□□ 0.49
NUP50-210ENST00000434760 AFAP1L1Q8TED9 768 aa18.14■□□□□ 0.49
NUP50-210ENST00000434760 NOD1Q9Y239 953 aa18.14■□□□□ 0.49
NUP50-210ENST00000434760 TELO2Q9Y4R8 837 aa18.14■□□□□ 0.49
NUP50-210ENST00000434760 KAT6AQ92794 2004 aa18.14■□□□□ 0.49
NUP50-210ENST00000434760 RBAK-RBAKDNI3L0D1 243 aa18.13■□□□□ 0.49
NUP50-210ENST00000434760 PPFIA4O75335 1185 aa18.13■□□□□ 0.49
NUP50-210ENST00000434760 LGALS2P05162 132 aa18.13■□□□□ 0.49
NUP50-210ENST00000434760 FOSL2P15408 326 aa18.13■□□□□ 0.49
NUP50-210ENST00000434760 KRT32Q14532 448 aa18.13■□□□□ 0.49
NUP50-210ENST00000434760 RAB30Q15771 203 aa18.13■□□□□ 0.49
NUP50-210ENST00000434760 WWC2Q6AWC2 1192 aa18.13■□□□□ 0.49
NUP50-210ENST00000434760 XRRA1Q6P2D8 792 aa18.13■□□□□ 0.49
NUP50-210ENST00000434760 METTL7BQ6UX53 244 aa18.13■□□□□ 0.49
NUP50-210ENST00000434760 CCDC82Q8N4S0 544 aa18.13■□□□□ 0.49
NUP50-210ENST00000434760 MAFAQ8NHW3 353 aaPredicted RBP18.13■□□□□ 0.49
NUP50-210ENST00000434760 CUL5Q93034 780 aa18.13■□□□□ 0.49
NUP50-210ENST00000434760 ALG1Q9BT22 464 aa18.13■□□□□ 0.49
NUP50-210ENST00000434760 FAM217BQ9NTX9 383 aaPredicted RBP18.13■□□□□ 0.49
NUP50-210ENST00000434760 HSPA4P34932 840 aa18.12■□□□□ 0.49
NUP50-210ENST00000434760 RCAN1P53805 252 aa18.12■□□□□ 0.49
NUP50-210ENST00000434760 RTN1Q16799 776 aa18.12■□□□□ 0.49
NUP50-210ENST00000434760 LRRC8DQ7L1W4 858 aa18.12■□□□□ 0.49
NUP50-210ENST00000434760 HEATR3Q7Z4Q2 680 aa18.12■□□□□ 0.49
NUP50-210ENST00000434760 CCDC155Q8N6L0 562 aa18.12■□□□□ 0.49
NUP50-210ENST00000434760 C7orf31Q8N865 590 aa18.12■□□□□ 0.49
NUP50-210ENST00000434760 GPR20Q99678 358 aa18.12■□□□□ 0.49
NUP50-210ENST00000434760 PSTPIP2Q9H939 334 aa18.12■□□□□ 0.49
NUP50-210ENST00000434760 RBM28Q9NW13 759 aaKnown RBP18.12■□□□□ 0.49
NUP50-210ENST00000434760 RTEL1Q9NZ71 1219 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms