RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 DLX3O60479 287 aa8.11□□□□□ -1.11
HDAC9-213ENST00000433709 PPP1R11O60927 126 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-213ENST00000433709 PNLIPP16233 465 aa8.11□□□□□ -1.11
HDAC9-213ENST00000433709 CYP4F8P98187 520 aa8.11□□□□□ -1.11
HDAC9-213ENST00000433709 MLANAQ16655 118 aa8.11□□□□□ -1.11
HDAC9-213ENST00000433709 INF2Q27J81 1249 aa8.11□□□□□ -1.11
HDAC9-213ENST00000433709 CCDC103Q8IW40 242 aa8.11□□□□□ -1.11
HDAC9-213ENST00000433709 C1orf159Q96HA4 380 aa8.11□□□□□ -1.11
HDAC9-213ENST00000433709 INTS4Q96HW7 963 aaKnown RBP8.11□□□□□ -1.11
HDAC9-213ENST00000433709 KCNK12Q9HB15 430 aa8.11□□□□□ -1.11
HDAC9-213ENST00000433709 CRTAC1Q9NQ79 661 aa8.11□□□□□ -1.11
HDAC9-213ENST00000433709 RNF114Q9Y508 228 aa8.11□□□□□ -1.11
HDAC9-213ENST00000433709 TRAV20A0A0B4J274 112 aa8.1□□□□□ -1.11
HDAC9-213ENST00000433709 C7orf72A4D263 438 aa8.1□□□□□ -1.11
HDAC9-213ENST00000433709 LRRC10BA6NIK2 292 aa8.1□□□□□ -1.11
HDAC9-213ENST00000433709 CPP00450 1065 aa8.1□□□□□ -1.11
HDAC9-213ENST00000433709 FAM153BP0C7A2 387 aa8.1□□□□□ -1.11
HDAC9-213ENST00000433709 PABPC1P11940 636 aaKnown RBP8.1□□□□□ -1.11
HDAC9-213ENST00000433709 SLC35F1Q5T1Q4 408 aa8.1□□□□□ -1.11
HDAC9-213ENST00000433709 NSMFQ6X4W1 530 aa8.1□□□□□ -1.11
HDAC9-213ENST00000433709 DPH6Q7L8W6 267 aa8.1□□□□□ -1.11
HDAC9-213ENST00000433709 OSBP2Q969R2 916 aa8.1□□□□□ -1.11
HDAC9-213ENST00000433709 DIRC2Q96SL1 478 aa8.1□□□□□ -1.11
HDAC9-213ENST00000433709 MMP19Q99542 508 aa8.1□□□□□ -1.11
HDAC9-213ENST00000433709 SLC6A17Q9H1V8 727 aa8.1□□□□□ -1.11
HDAC9-213ENST00000433709 POLR1AO95602 1720 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-213ENST00000433709 SCAF11Q99590 1463 aaKnown RBP8.09□□□□□ -1.11
HDAC9-213ENST00000433709 TRBV23OR9-2A0A075B6M9 112 aa8.09□□□□□ -1.11
HDAC9-213ENST00000433709 PAX4O43316 350 aa8.09□□□□□ -1.11
HDAC9-213ENST00000433709 FGFR1P11362 822 aa8.09□□□□□ -1.11
HDAC9-213ENST00000433709 TACR1P25103 407 aa8.09□□□□□ -1.11
HDAC9-213ENST00000433709 PDE6BP35913 854 aa8.09□□□□□ -1.11
HDAC9-213ENST00000433709 ADGRF1Q5T601 910 aa8.09□□□□□ -1.11
HDAC9-213ENST00000433709 FOXB2Q5VYV0 432 aa8.09□□□□□ -1.11
HDAC9-213ENST00000433709 PPIL6Q8IXY8 311 aa8.09□□□□□ -1.11
HDAC9-213ENST00000433709 ZBTB38Q8NAP3 1195 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-213ENST00000433709 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.09□□□□□ -1.11
HDAC9-213ENST00000433709 NLGN2Q8NFZ4 835 aa8.09□□□□□ -1.11
HDAC9-213ENST00000433709 KCTD13Q8WZ19 329 aa8.09□□□□□ -1.11
HDAC9-213ENST00000433709 NSUN3Q9H649 340 aaKnown RBP8.09□□□□□ -1.11
HDAC9-213ENST00000433709 FAM53CQ9NYF3 392 aa8.09□□□□□ -1.11
HDAC9-213ENST00000433709 GULP1Q9UBP9 304 aa8.09□□□□□ -1.11
HDAC9-213ENST00000433709 MROH1Q8NDA8 1641 aa8.09□□□□□ -1.11
HDAC9-213ENST00000433709 KDM5AP29375 1690 aaKnown RBP8.08□□□□□ -1.12
HDAC9-213ENST00000433709 MEFVO15553 781 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-213ENST00000433709 MAP4K2Q12851 820 aa8.08□□□□□ -1.12
HDAC9-213ENST00000433709 NFE2L2Q16236 605 aa8.08□□□□□ -1.12
HDAC9-213ENST00000433709 LILRB2Q8N423 598 aa8.08□□□□□ -1.12
HDAC9-213ENST00000433709 DPF3Q92784 378 aa8.08□□□□□ -1.12
HDAC9-213ENST00000433709 PIF1Q9H611 641 aa8.08□□□□□ -1.12
HDAC9-213ENST00000433709 PDLIM7Q9NR12 457 aa8.08□□□□□ -1.12
HDAC9-213ENST00000433709 RWDD3Q9Y3V2 267 aa8.08□□□□□ -1.12
HDAC9-213ENST00000433709 TMEM2Q9UHN6 1383 aa8.08□□□□□ -1.12
HDAC9-213ENST00000433709 SLIT1O75093 1534 aa8.08□□□□□ -1.12
HDAC9-213ENST00000433709 VWDEQ8N2E2 1590 aa8.07□□□□□ -1.12
HDAC9-213ENST00000433709 BLACEA4D250 179 aa8.07□□□□□ -1.12
HDAC9-213ENST00000433709 NPHS1O60500 1241 aa8.07□□□□□ -1.12
HDAC9-213ENST00000433709 LCP1P13796 627 aa8.07□□□□□ -1.12
HDAC9-213ENST00000433709 ARL4AP40617 200 aa8.07□□□□□ -1.12
HDAC9-213ENST00000433709 IDI1Q13907 227 aa8.07□□□□□ -1.12
HDAC9-213ENST00000433709 FAM209AQ5JX71 171 aa8.07□□□□□ -1.12
HDAC9-213ENST00000433709 ACBD5Q5T8D3 534 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-213ENST00000433709 E4F1Q66K89 784 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-213ENST00000433709 IQCEQ6IPM2 695 aa8.07□□□□□ -1.12
HDAC9-213ENST00000433709 IRF2BP1Q8IU81 584 aa8.07□□□□□ -1.12
HDAC9-213ENST00000433709 DIO2Q92813 273 aa8.07□□□□□ -1.12
HDAC9-213ENST00000433709 FBLN5Q9UBX5 448 aa8.07□□□□□ -1.12
HDAC9-213ENST00000433709 ARHGAP23Q9P227 1491 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 CEP152O94986 1710 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 NOS1P29475 1434 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 A0A1W2PQJ5 194 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 CORO7P57737 925 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 ERVFRD-1P60508 538 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 NTRK3Q16288 839 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 BICRALQ6AI39 1079 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 USP53Q70EK8 1073 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 RCBTB1Q8NDN9 531 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 MRFAP1L1Q96HT8 127 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 CDC6Q99741 560 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 MTA3Q9BTC8 594 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 DCP1AQ9NPI6 582 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-213ENST00000433709 BTG4Q9NY30 223 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 EFCAB6Q5THR3 1501 aa8.06□□□□□ -1.12
HDAC9-213ENST00000433709 IQGAP1P46940 1657 aa8.05□□□□□ -1.12
HDAC9-213ENST00000433709 OR14I1A6ND48 311 aa8.05□□□□□ -1.12
HDAC9-213ENST00000433709 LTBRP36941 435 aa8.05□□□□□ -1.12
HDAC9-213ENST00000433709 KCNAB2Q13303 367 aa8.05□□□□□ -1.12
HDAC9-213ENST00000433709 TESK1Q15569 626 aa8.05□□□□□ -1.12
HDAC9-213ENST00000433709 OGFOD2Q6N063 350 aa8.05□□□□□ -1.12
HDAC9-213ENST00000433709 ZNF605Q86T29 641 aa8.05□□□□□ -1.12
HDAC9-213ENST00000433709 LZTR1Q8N653 840 aa8.05□□□□□ -1.12
HDAC9-213ENST00000433709 EXOC2Q96KP1 924 aa8.05□□□□□ -1.12
HDAC9-213ENST00000433709 FMNL2Q96PY5 1086 aa8.05□□□□□ -1.12
HDAC9-213ENST00000433709 TNFRSF12AQ9NP84 129 aa8.05□□□□□ -1.12
HDAC9-213ENST00000433709 NEURL4Q96JN8 1562 aa8.05□□□□□ -1.12
HDAC9-213ENST00000433709 UBR1Q8IWV7 1749 aa8.04□□□□□ -1.12
HDAC9-213ENST00000433709 NUDT19A8MXV4 375 aa8.04□□□□□ -1.12
HDAC9-213ENST00000433709 FUCA1P04066 466 aa8.04□□□□□ -1.12
HDAC9-213ENST00000433709 MPOP05164 745 aa8.04□□□□□ -1.12
HDAC9-213ENST00000433709 SCUBE1Q8IWY4 988 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms