RNA–Protein interactions for RNA: ENST00000433419.2

CCDC144CP-202, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

BASIC

Gene CCDC144CP, Length 5,227 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-202ENST00000433419 PNMA8AQ86V59 439 aaPredicted RBP11.86□□□□□ -0.51
CCDC144CP-202ENST00000433419 RAET1EQ8TD07 263 aa11.86□□□□□ -0.51
CCDC144CP-202ENST00000433419 FAM84BQ96KN1 310 aaPredicted RBP11.86□□□□□ -0.51
CCDC144CP-202ENST00000433419 SNAP23O00161 211 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 CUL4BQ13620 913 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 TAF1CQ15572 869 aaPredicted RBP11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 TRIM11Q96F44 468 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 MTIF3Q9H2K0 278 aaKnown RBP11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 A6NJR5 290 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 WDR64B1ANS9 1081 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 NBPF26B4DH59 902 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 F5H6K3 240 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 IRX5P78411 483 aaPredicted RBP11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 KLRC3Q07444 240 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 UBE2SQ16763 222 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 MUM1L1Q5H9M0 696 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 NBPF10Q6P3W6 841 aaKnown RBP11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 NBPF15Q8N660 670 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 NLRP4Q96MN2 994 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 RPF1Q9H9Y2 349 aaKnown RBP11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 LRRC4Q9HBW1 653 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 PCDHB4Q9Y5E5 795 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 POLR2FP61218 127 aaKnown RBP11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 ARL6IP4Q66PJ3 421 aaKnown RBP11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 STYK1Q6J9G0 422 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 PPP1R18Q6NYC8 613 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 SPDYE16A6NNV3 312 aaPredicted RBP11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 IFNB1P01574 187 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 SRGAP2CP0DJJ0 459 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 ANXA13P27216 316 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 PLCB4Q15147 1175 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 DNAJC21Q5F1R6 531 aaKnown RBP11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 MMP19Q99542 508 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 CARD6Q9BX69 1037 aa11.85□□□□□ -0.51
CCDC144CP-202ENST00000433419 KRT10P13645 584 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 RPS12P25398 132 aaKnown RBP11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 TIGD1Q96MW7 591 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 ANAPC4Q9UJX5 808 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 AFG3L2Q9Y4W6 797 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 CLIC4Q9Y696 253 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 GLI2P10070 1586 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 LDHAP00338 332 aaKnown RBP11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 RCAN1P53805 252 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 KIF23Q02241 960 aaPredicted RBP11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 ITKQ08881 620 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 PSMD2Q13200 908 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 TMTC3Q6ZXV5 915 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 CPLX4Q7Z7G2 160 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 C7orf31Q8N865 590 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 TRIM58Q8NG06 486 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 CCDC110Q8TBZ0 833 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 PI4K2BQ8TCG2 481 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 ATP2A3Q93084 1043 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 PLA2G12BQ9BX93 195 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 PFDN4Q9NQP4 134 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 CDC42BPAQ5VT25 1732 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 CLTCL1P53675 1640 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 GOLGA8CPA6NN73 597 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 MED7O43513 233 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 MARK3P27448 753 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 SETDB1Q15047 1291 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 LONRF3Q496Y0 759 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 PCDHA6Q9UN73 950 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 PCDHA8Q9Y5H6 950 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 C19orf81C9J6K1 198 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 ARPP19P56211 112 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 BSPRYQ5W0U4 402 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 DSTYKQ6XUX3 929 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 AGLP35573 1532 aa11.84□□□□□ -0.51
CCDC144CP-202ENST00000433419 MYO1FO00160 1098 aa11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 SLFN14P0C7P3 912 aa11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 CYP2D6P10635 497 aa11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 U2AF2P26368 475 aaKnown RBP eCLIP11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 PHKA2P46019 1235 aa11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 ALX1Q15699 326 aa11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 ERCC6LQ2NKX8 1250 aa11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 KCNV1Q6PIU1 500 aa11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 NBPF11Q86T75 865 aa11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 GPT2Q8TD30 523 aa11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 GTF3C2Q8WUA4 911 aaPredicted RBP11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 TRIM31Q9BZY9 425 aa11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 RAB17Q9H0T7 212 aa11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 CPSF3Q9UKF6 684 aaKnown RBP11.83□□□□□ -0.51
CCDC144CP-202ENST00000433419 FAM196BA6NMK8 535 aa11.83□□□□□ -0.52
CCDC144CP-202ENST00000433419 ENTPD3O75355 529 aa11.83□□□□□ -0.52
CCDC144CP-202ENST00000433419 PLA2G4BP0C869 781 aa11.83□□□□□ -0.52
CCDC144CP-202ENST00000433419 SFNP31947 248 aa11.83□□□□□ -0.52
CCDC144CP-202ENST00000433419 ZNF157P51786 506 aaPredicted RBP11.83□□□□□ -0.52
CCDC144CP-202ENST00000433419 GPIHBP1Q8IV16 184 aa11.83□□□□□ -0.52
CCDC144CP-202ENST00000433419 NME8Q8N427 588 aa11.83□□□□□ -0.52
CCDC144CP-202ENST00000433419 NEK9Q8TD19 979 aa11.83□□□□□ -0.52
CCDC144CP-202ENST00000433419 GRK7Q8WTQ7 553 aa11.83□□□□□ -0.52
CCDC144CP-202ENST00000433419 FAM20AQ96MK3 541 aa11.83□□□□□ -0.52
CCDC144CP-202ENST00000433419 CCDC68Q9H2F9 335 aa11.83□□□□□ -0.52
CCDC144CP-202ENST00000433419 OGFRQ9NZT2 677 aa11.83□□□□□ -0.52
CCDC144CP-202ENST00000433419 SLC8A2Q9UPR5 921 aa11.83□□□□□ -0.52
CCDC144CP-202ENST00000433419 MEIS1O00470 390 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms