RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 SKOR1P84550 965 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 MAP2K1Q02750 393 aaPredicted RBP9.76□□□□□ -0.85
CDH13-202ENST00000428848 EHHADHQ08426 723 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 GRB10Q13322 594 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 NONOQ15233 471 aaKnown RBP eCLIP9.76□□□□□ -0.85
CDH13-202ENST00000428848 CCDC96Q2M329 555 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 GBP6Q6ZN66 633 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 ARHGAP27Q6ZUM4 889 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 C15orf52Q6ZUT6 534 aaKnown RBP9.76□□□□□ -0.85
CDH13-202ENST00000428848 UNC13DQ70J99 1090 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 USP17L1Q7RTZ2 530 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 C2CD5Q86YS7 1000 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 SLF2Q8IX21 1173 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 CCDC155Q8N6L0 562 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 RRP36Q96EU6 259 aaKnown RBP9.76□□□□□ -0.85
CDH13-202ENST00000428848 PCMTD1Q96MG8 357 aaPredicted RBP9.76□□□□□ -0.85
CDH13-202ENST00000428848 TMEM47Q9BQJ4 181 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 TLR10Q9BXR5 811 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 PLEKHA4Q9H4M7 779 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 SSU72P8A0A1W2PR75 194 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 LDHBP07195 334 aaKnown RBP9.75□□□□□ -0.85
CDH13-202ENST00000428848 LIG3P49916 1009 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 NNTQ13423 1086 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 KLHDC7AQ5VTJ3 777 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 ALS2CLQ60I27 953 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 HGSNATQ68CP4 663 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 NFRKBQ6P4R8 1299 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 LRRC55Q6ZSA7 311 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 TMC4Q7Z404 712 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 NEK8Q86SG6 692 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 CCDC84Q86UT8 332 aaPredicted RBP9.75□□□□□ -0.85
CDH13-202ENST00000428848 SPATS2Q86XZ4 545 aaKnown RBP9.75□□□□□ -0.85
CDH13-202ENST00000428848 GUF1Q8N442 669 aaKnown RBP9.75□□□□□ -0.85
CDH13-202ENST00000428848 TSEN2Q8NCE0 465 aaKnown RBP9.75□□□□□ -0.85
CDH13-202ENST00000428848 HPS3Q969F9 1004 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 RBM17Q96I25 401 aaKnown RBP9.75□□□□□ -0.85
CDH13-202ENST00000428848 PNMA5Q96PV4 448 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 MTMR9Q96QG7 549 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 CAMKK2Q96RR4 588 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 STIM2Q9P246 746 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 DDX60LQ5H9U9 1706 aaKnown RBP9.75□□□□□ -0.85
CDH13-202ENST00000428848 SHTN1A0MZ66 631 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 MYMKA6NI61 221 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 LRRC53A6NM62 1247 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 A6NNZ2 444 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 EIF3HO15372 352 aaKnown RBP eCLIP9.75□□□□□ -0.85
CDH13-202ENST00000428848 CCNT1O60563 726 aaKnown RBP9.75□□□□□ -0.85
CDH13-202ENST00000428848 SMARCA1P28370 1054 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 INPP5BP32019 993 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 TECP42680 631 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 PPP4CP60510 307 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 LETM2Q2VYF4 491 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 TUBB8Q3ZCM7 444 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 GLE1Q53GS7 698 aaKnown RBP9.75□□□□□ -0.85
CDH13-202ENST00000428848 PDXDC1Q6P996 788 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 RNF10Q8N5U6 811 aaKnown RBP9.75□□□□□ -0.85
CDH13-202ENST00000428848 CABS1Q96KC9 395 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 ALS2CR12Q96Q35 445 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 CAPS2Q9BXY5 557 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 SLC39A2Q9NP94 309 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 TFCP2L1Q9NZI6 479 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 STK17AQ9UEE5 414 aa9.75□□□□□ -0.85
CDH13-202ENST00000428848 ESYT2A0FGR8 921 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 CCDC189A1A4V9 331 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 TMCO5BA8MYB1 307 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 KLRF2D3W0D1 207 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 EDIL3O43854 480 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 OPA1O60313 960 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 PLCG2P16885 1265 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 RASA1P20936 1047 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 ATP2B4P23634 1241 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 MAGEA1P43355 309 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 FXR2P51116 673 aaKnown RBP eCLIP9.74□□□□□ -0.85
CDH13-202ENST00000428848 KCNQ4P56696 695 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 LRRC63Q05C16 580 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 KCNMA1Q12791 1236 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 NEDD9Q14511 834 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 R3HDM1Q15032 1099 aaKnown RBP9.74□□□□□ -0.85
CDH13-202ENST00000428848 TTMPQ5BVD1 217 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 EMC10Q5UCC4 262 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 SV2BQ7L1I2 683 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 TXNRD3Q86VQ6 643 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 GIMAP7Q8NHV1 300 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 MTMR8Q96EF0 704 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 GDF3Q9NR23 364 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 FAM207AQ9NSI2 230 aaPredicted RBP9.74□□□□□ -0.85
CDH13-202ENST00000428848 RNF14Q9UBS8 474 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 SNED1Q8TER0 1413 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 SMCO2A6NFE2 343 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 AKR1B10O60218 316 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 BBOX1O75936 387 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 FGFR1OPO95684 399 aaKnown RBP9.74□□□□□ -0.85
CDH13-202ENST00000428848 TSPY3P0CV98 308 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 TSPY8P0CW00 308 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 GNA11P29992 359 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 TM4SF1P30408 202 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 CCT5P48643 541 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 NOVP48745 357 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 NAPAP54920 295 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 SLC7A5Q01650 507 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms