RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 LRRC41Q15345 812 aa25.43■■□□□ 1.66
PTPN18-205ENST00000428843 EARS2Q5JPH6 523 aaKnown RBP25.43■■□□□ 1.66
PTPN18-205ENST00000428843 PIK3AP1Q6ZUJ8 805 aa25.43■■□□□ 1.66
PTPN18-205ENST00000428843 ARRDC4Q8NCT1 418 aa25.43■■□□□ 1.66
PTPN18-205ENST00000428843 CYP2W1Q8TAV3 490 aa25.43■■□□□ 1.66
PTPN18-205ENST00000428843 AP5M1Q9H0R1 490 aa25.43■■□□□ 1.66
PTPN18-205ENST00000428843 MYADML2A6NDP7 307 aa25.42■■□□□ 1.66
PTPN18-205ENST00000428843 CAPN15O75808 1086 aa25.42■■□□□ 1.66
PTPN18-205ENST00000428843 SP2Q02086 613 aa25.42■■□□□ 1.66
PTPN18-205ENST00000428843 INF2Q27J81 1249 aa25.42■■□□□ 1.66
PTPN18-205ENST00000428843 CEP55Q53EZ4 464 aa25.42■■□□□ 1.66
PTPN18-205ENST00000428843 ANKLE1Q8NAG6 615 aa25.42■■□□□ 1.66
PTPN18-205ENST00000428843 OR6J1Q8NGC5 347 aa25.42■■□□□ 1.66
PTPN18-205ENST00000428843 SPC25Q9HBM1 224 aa25.42■■□□□ 1.66
PTPN18-205ENST00000428843 DOCK5Q9H7D0 1870 aa25.41■■□□□ 1.66
PTPN18-205ENST00000428843 FAM205CA6NFA0 338 aa25.41■■□□□ 1.66
PTPN18-205ENST00000428843 FAM86B1E9PN63 330 aa25.41■■□□□ 1.66
PTPN18-205ENST00000428843 GH1P01241 217 aa25.41■■□□□ 1.66
PTPN18-205ENST00000428843 FAM86B2P0C5J1 330 aa25.41■■□□□ 1.66
PTPN18-205ENST00000428843 C6orf222P0C671 652 aaPredicted RBP25.41■■□□□ 1.66
PTPN18-205ENST00000428843 UBA1P22314 1058 aaKnown RBP25.41■■□□□ 1.66
PTPN18-205ENST00000428843 CIITAP33076 1130 aa25.41■■□□□ 1.66
PTPN18-205ENST00000428843 MNX1P50219 401 aaPredicted RBP25.41■■□□□ 1.66
PTPN18-205ENST00000428843 USP11P51784 963 aa25.41■■□□□ 1.66
PTPN18-205ENST00000428843 MTMR1Q13613 665 aa25.41■■□□□ 1.66
PTPN18-205ENST00000428843 RNF180Q86T96 592 aa25.41■■□□□ 1.66
PTPN18-205ENST00000428843 KLHDC9Q8NEP7 349 aa25.41■■□□□ 1.66
PTPN18-205ENST00000428843 CDHR1Q96JP9 859 aa25.41■■□□□ 1.66
PTPN18-205ENST00000428843 MEIS1O00470 390 aa25.4■■□□□ 1.66
PTPN18-205ENST00000428843 CTAGE5O15320 804 aa25.4■■□□□ 1.66
PTPN18-205ENST00000428843 NKX3-2P78367 333 aa25.4■■□□□ 1.66
PTPN18-205ENST00000428843 NIPA1Q7RTP0 329 aa25.4■■□□□ 1.66
PTPN18-205ENST00000428843 IGLV3-22A0A075B6J6 115 aa25.39■■□□□ 1.66
PTPN18-205ENST00000428843 DNM1LO00429 736 aa25.39■■□□□ 1.66
PTPN18-205ENST00000428843 MAFGO15525 162 aa25.39■■□□□ 1.66
PTPN18-205ENST00000428843 FARP2O94887 1054 aaPredicted RBP25.39■■□□□ 1.66
PTPN18-205ENST00000428843 GGPS1O95749 300 aa25.39■■□□□ 1.66
PTPN18-205ENST00000428843 ARP10275 920 aa25.39■■□□□ 1.66
PTPN18-205ENST00000428843 CST5P28325 142 aaPredicted RBP25.39■■□□□ 1.66
PTPN18-205ENST00000428843 BEX3Q00994 111 aa25.39■■□□□ 1.66
PTPN18-205ENST00000428843 ARHGAP1Q07960 439 aa25.39■■□□□ 1.66
PTPN18-205ENST00000428843 LARP1BQ659C4 914 aaKnown RBP25.39■■□□□ 1.66
PTPN18-205ENST00000428843 PLA2G4DQ86XP0 818 aa25.39■■□□□ 1.66
PTPN18-205ENST00000428843 DHX37Q8IY37 1157 aaKnown RBP25.39■■□□□ 1.66
PTPN18-205ENST00000428843 DIS3LQ8TF46 1054 aaKnown RBP25.39■■□□□ 1.66
PTPN18-205ENST00000428843 FOXP1Q9H334 677 aaPredicted RBP25.39■■□□□ 1.66
PTPN18-205ENST00000428843 KCNH7Q9NS40 1196 aa25.39■■□□□ 1.66
PTPN18-205ENST00000428843 KBTBD13C9JR72 458 aa25.38■■□□□ 1.65
PTPN18-205ENST00000428843 H3BQV1 296 aa25.38■■□□□ 1.65
PTPN18-205ENST00000428843 SORBS3O60504 671 aa25.38■■□□□ 1.65
PTPN18-205ENST00000428843 ATP9AO75110 1047 aa25.38■■□□□ 1.65
PTPN18-205ENST00000428843 FSCN1Q16658 493 aaKnown RBP25.38■■□□□ 1.65
PTPN18-205ENST00000428843 GNASQ5JWF2 1037 aa25.38■■□□□ 1.65
PTPN18-205ENST00000428843 CELF3Q5SZQ8 465 aaKnown RBP25.38■■□□□ 1.65
PTPN18-205ENST00000428843 IFFO2Q5TF58 517 aa25.38■■□□□ 1.65
PTPN18-205ENST00000428843 NEK8Q86SG6 692 aa25.38■■□□□ 1.65
PTPN18-205ENST00000428843 BCAS3Q9H6U6 928 aa25.38■■□□□ 1.65
PTPN18-205ENST00000428843 KIF28PB7ZC32 967 aa25.37■■□□□ 1.65
PTPN18-205ENST00000428843 HSP90AA1P07900 732 aaKnown RBP25.37■■□□□ 1.65
PTPN18-205ENST00000428843 KCNA2P16389 499 aa25.37■■□□□ 1.65
PTPN18-205ENST00000428843 GNL2Q13823 731 aaKnown RBP25.37■■□□□ 1.65
PTPN18-205ENST00000428843 NEDD9Q14511 834 aa25.37■■□□□ 1.65
PTPN18-205ENST00000428843 KCNA10Q16322 511 aa25.37■■□□□ 1.65
PTPN18-205ENST00000428843 LETM2Q2VYF4 491 aa25.37■■□□□ 1.65
PTPN18-205ENST00000428843 PRR16Q569H4 304 aa25.37■■□□□ 1.65
PTPN18-205ENST00000428843 MYSM1Q5VVJ2 828 aa25.37■■□□□ 1.65
PTPN18-205ENST00000428843 CCSAPQ6IQ19 270 aaPredicted RBP25.37■■□□□ 1.65
PTPN18-205ENST00000428843 EMID1Q96A84 441 aaPredicted RBP25.37■■□□□ 1.65
PTPN18-205ENST00000428843 SENP7Q9BQF6 1050 aa25.37■■□□□ 1.65
PTPN18-205ENST00000428843 PKD2L1Q9P0L9 805 aa25.37■■□□□ 1.65
PTPN18-205ENST00000428843 CYP3A7-CYP3A51PA0A087WV96 503 aa25.36■■□□□ 1.65
PTPN18-205ENST00000428843 TDP2O95551 362 aa25.36■■□□□ 1.65
PTPN18-205ENST00000428843 CYP3A7P24462 503 aa25.36■■□□□ 1.65
PTPN18-205ENST00000428843 SETQ01105 290 aaPredicted RBP25.36■■□□□ 1.65
PTPN18-205ENST00000428843 LAMC2Q13753 1193 aa25.36■■□□□ 1.65
PTPN18-205ENST00000428843 MOXD1Q6UVY6 613 aa25.36■■□□□ 1.65
PTPN18-205ENST00000428843 UBE2Q1Q7Z7E8 422 aa25.36■■□□□ 1.65
PTPN18-205ENST00000428843 AFG1LQ8WV93 481 aa25.36■■□□□ 1.65
PTPN18-205ENST00000428843 LENG9Q96B70 501 aa25.36■■□□□ 1.65
PTPN18-205ENST00000428843 PAWRQ96IZ0 340 aaKnown RBP25.36■■□□□ 1.65
PTPN18-205ENST00000428843 TSEN34Q9BSV6 310 aaKnown RBP25.36■■□□□ 1.65
PTPN18-205ENST00000428843 MLXIPQ9HAP2 919 aa25.36■■□□□ 1.65
PTPN18-205ENST00000428843 AGO4Q9HCK5 861 aaKnown RBP25.36■■□□□ 1.65
PTPN18-205ENST00000428843 PDCP20941 246 aa25.35■■□□□ 1.65
PTPN18-205ENST00000428843 U2AF2P26368 475 aaKnown RBP eCLIP25.35■■□□□ 1.654e-7■■■■□ 26
PTPN18-205ENST00000428843 CPT1AP50416 773 aa25.35■■□□□ 1.65
PTPN18-205ENST00000428843 CYFIP1Q7L576 1253 aa25.35■■□□□ 1.65
PTPN18-205ENST00000428843 NOSTRINQ8IVI9 506 aa25.35■■□□□ 1.65
PTPN18-205ENST00000428843 PCSK9Q8NBP7 692 aaKnown RBP25.35■■□□□ 1.65
PTPN18-205ENST00000428843 GIMAP8Q8ND71 665 aaPredicted RBP25.35■■□□□ 1.65
PTPN18-205ENST00000428843 A6NJR5 290 aa25.34■■□□□ 1.65
PTPN18-205ENST00000428843 Q4G0T1 1027 aa25.34■■□□□ 1.65
PTPN18-205ENST00000428843 MCTP1Q6DN14 999 aa25.34■■□□□ 1.65
PTPN18-205ENST00000428843 METTL7BQ6UX53 244 aa25.34■■□□□ 1.65
PTPN18-205ENST00000428843 SPRYD3Q8NCJ5 442 aa25.34■■□□□ 1.65
PTPN18-205ENST00000428843 PPTC7Q8NI37 304 aa25.34■■□□□ 1.65
PTPN18-205ENST00000428843 SPATA33Q96N06 139 aa25.34■■□□□ 1.65
PTPN18-205ENST00000428843 MBOAT7Q96N66 472 aa25.34■■□□□ 1.65
PTPN18-205ENST00000428843 UIMC1Q96RL1 719 aa25.34■■□□□ 1.65
PTPN18-205ENST00000428843 C11orf49Q9H6J7 331 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms