RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 TRIM32Q13049 653 aa27.33■■□□□ 1.97
APOE-202ENST00000425718 DDX20Q9UHI6 824 aaKnown RBP27.33■■□□□ 1.97
APOE-202ENST00000425718 TCEAL9Q9UHQ7 104 aa27.33■■□□□ 1.97
APOE-202ENST00000425718 TBX3O15119 743 aa27.32■■□□□ 1.96
APOE-202ENST00000425718 BAG4O95429 457 aaKnown RBP27.32■■□□□ 1.96
APOE-202ENST00000425718 BMP15O95972 392 aa27.32■■□□□ 1.96
APOE-202ENST00000425718 PRR16Q569H4 304 aa27.32■■□□□ 1.96
APOE-202ENST00000425718 EARS2Q5JPH6 523 aaKnown RBP27.32■■□□□ 1.96
APOE-202ENST00000425718 TTC38Q5R3I4 469 aa27.32■■□□□ 1.96
APOE-202ENST00000425718 TRPV1Q8NER1 839 aa27.32■■□□□ 1.96
APOE-202ENST00000425718 KCNH7Q9NS40 1196 aa27.32■■□□□ 1.96
APOE-202ENST00000425718 IGLV3-22A0A075B6J6 115 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 FAM86B1E9PN63 330 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 RGS20O76081 388 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 FAM86B2P0C5J1 330 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 CCL5P13501 91 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 CCND3P30281 292 aaPredicted RBP27.31■■□□□ 1.96
APOE-202ENST00000425718 ADCYAP1R1P41586 468 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 RESTQ13127 1097 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 BRDTQ58F21 947 aaPredicted RBP27.31■■□□□ 1.96
APOE-202ENST00000425718 MYSM1Q5VVJ2 828 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 CCDC62Q6P9F0 684 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 FERMT3Q86UX7 667 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 SDF4Q9BRK5 362 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 TMEM106CQ9BVX2 250 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 RNF208Q9H0X6 261 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 PAK6Q9NQU5 681 aaPredicted RBP27.31■■□□□ 1.96
APOE-202ENST00000425718 DDX41Q9UJV9 622 aaKnown RBP27.31■■□□□ 1.96
APOE-202ENST00000425718 CEP131Q9UPN4 1083 aa27.31■■□□□ 1.96
APOE-202ENST00000425718 HTTP42858 3142 aa27.3■■□□□ 1.96
APOE-202ENST00000425718 MARCH6O60337 910 aa27.3■■□□□ 1.96
APOE-202ENST00000425718 F13A1P00488 732 aa27.3■■□□□ 1.96
APOE-202ENST00000425718 GH1P01241 217 aa27.3■■□□□ 1.96
APOE-202ENST00000425718 SLFN12Q8IYM2 578 aa27.3■■□□□ 1.96
APOE-202ENST00000425718 FAM20AQ96MK3 541 aa27.3■■□□□ 1.96
APOE-202ENST00000425718 AP5M1Q9H0R1 490 aa27.3■■□□□ 1.96
APOE-202ENST00000425718 PDGFCQ9NRA1 345 aa27.3■■□□□ 1.96
APOE-202ENST00000425718 TBC1D22BQ9NU19 505 aa27.3■■□□□ 1.96
APOE-202ENST00000425718 DDX49Q9Y6V7 483 aaKnown RBP27.3■■□□□ 1.96
APOE-202ENST00000425718 NFASCO94856 1347 aa27.3■■□□□ 1.96
APOE-202ENST00000425718 FAM205CA6NFA0 338 aa27.29■■□□□ 1.96
APOE-202ENST00000425718 LAD1O00515 517 aa27.29■■□□□ 1.96
APOE-202ENST00000425718 NEMFO60524 1076 aa27.29■■□□□ 1.96
APOE-202ENST00000425718 BRD1O95696 1058 aa27.29■■□□□ 1.96
APOE-202ENST00000425718 LAMC2Q13753 1193 aa27.29■■□□□ 1.96
APOE-202ENST00000425718 ATL3Q6DD88 541 aa27.29■■□□□ 1.96
APOE-202ENST00000425718 EMID1Q96A84 441 aaPredicted RBP27.29■■□□□ 1.96
APOE-202ENST00000425718 ZNF577Q9BSK1 485 aa27.29■■□□□ 1.96
APOE-202ENST00000425718 UNC93B1Q9H1C4 597 aa27.29■■□□□ 1.96
APOE-202ENST00000425718 DOCK5Q9H7D0 1870 aa27.29■■□□□ 1.96
APOE-202ENST00000425718 KIAA0100Q14667 2235 aaKnown RBP27.29■■□□□ 1.96
APOE-202ENST00000425718 TDP2O95551 362 aa27.28■■□□□ 1.96
APOE-202ENST00000425718 DHX37Q8IY37 1157 aaKnown RBP27.28■■□□□ 1.96
APOE-202ENST00000425718 ZNF396Q96N95 335 aaPredicted RBP27.28■■□□□ 1.96
APOE-202ENST00000425718 AGO4Q9HCK5 861 aaKnown RBP27.28■■□□□ 1.96
APOE-202ENST00000425718 GNEQ9Y223 722 aaKnown RBP27.28■■□□□ 1.96
APOE-202ENST00000425718 IPO5O00410 1097 aaKnown RBP27.27■■□□□ 1.96
APOE-202ENST00000425718 GJB1P08034 283 aa27.27■■□□□ 1.96
APOE-202ENST00000425718 SMPD1P17405 629 aa27.27■■□□□ 1.96
APOE-202ENST00000425718 ATP2B1P20020 1258 aa27.27■■□□□ 1.96
APOE-202ENST00000425718 METTL7BQ6UX53 244 aa27.27■■□□□ 1.96
APOE-202ENST00000425718 TLK2Q86UE8 772 aa27.27■■□□□ 1.96
APOE-202ENST00000425718 CYP2W1Q8TAV3 490 aa27.27■■□□□ 1.96
APOE-202ENST00000425718 LENG9Q96B70 501 aa27.27■■□□□ 1.96
APOE-202ENST00000425718 RIT2Q99578 217 aa27.27■■□□□ 1.96
APOE-202ENST00000425718 MLXIPQ9HAP2 919 aa27.27■■□□□ 1.96
APOE-202ENST00000425718 EDIL3O43854 480 aa27.26■■□□□ 1.95
APOE-202ENST00000425718 ZEB2O60315 1214 aa27.26■■□□□ 1.95
APOE-202ENST00000425718 UBA1P22314 1058 aaKnown RBP27.26■■□□□ 1.95
APOE-202ENST00000425718 DDIT3P35638 169 aa27.26■■□□□ 1.95
APOE-202ENST00000425718 SEMA3FQ13275 785 aa27.26■■□□□ 1.95
APOE-202ENST00000425718 MTFR1Q15390 333 aa27.26■■□□□ 1.95
APOE-202ENST00000425718 CALCRLQ16602 461 aa27.26■■□□□ 1.95
APOE-202ENST00000425718 LY6KQ17RY6 165 aa27.26■■□□□ 1.95
APOE-202ENST00000425718 CELF3Q5SZQ8 465 aaKnown RBP27.26■■□□□ 1.95
APOE-202ENST00000425718 ARRDC4Q8NCT1 418 aa27.26■■□□□ 1.95
APOE-202ENST00000425718 OR6J1Q8NGC5 347 aa27.26■■□□□ 1.95
APOE-202ENST00000425718 ZFP91Q96JP5 570 aaPredicted RBP27.26■■□□□ 1.95
APOE-202ENST00000425718 GGPS1O95749 300 aa27.25■■□□□ 1.95
APOE-202ENST00000425718 ARP10275 920 aa27.25■■□□□ 1.95
APOE-202ENST00000425718 KCNA2P16389 499 aa27.25■■□□□ 1.95
APOE-202ENST00000425718 MCM7P33993 719 aa27.25■■□□□ 1.95
APOE-202ENST00000425718 CPT1AP50416 773 aa27.25■■□□□ 1.95
APOE-202ENST00000425718 GJA9P57773 515 aa27.25■■□□□ 1.95
APOE-202ENST00000425718 RNF180Q86T96 592 aa27.25■■□□□ 1.95
APOE-202ENST00000425718 UPF3AQ9H1J1 476 aaKnown RBP27.25■■□□□ 1.95
APOE-202ENST00000425718 KCNMB3Q9NPA1 279 aa27.25■■□□□ 1.95
APOE-202ENST00000425718 XPNPEP3Q9NQH7 507 aa27.25■■□□□ 1.95
APOE-202ENST00000425718 MYH9P35579 1960 aaKnown RBP27.25■■□□□ 1.95
APOE-202ENST00000425718 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.24■■□□□ 1.95
APOE-202ENST00000425718 MSH4O15457 936 aa27.24■■□□□ 1.95
APOE-202ENST00000425718 ARIH2O95376 493 aa27.24■■□□□ 1.95
APOE-202ENST00000425718 TOB1P50616 345 aaPredicted RBP27.24■■□□□ 1.95
APOE-202ENST00000425718 NKX3-2P78367 333 aa27.24■■□□□ 1.95
APOE-202ENST00000425718 SLC5A5Q92911 643 aa27.24■■□□□ 1.95
APOE-202ENST00000425718 TEKT3Q9BXF9 490 aa27.24■■□□□ 1.95
APOE-202ENST00000425718 JPH1Q9HDC5 661 aaPredicted RBP27.24■■□□□ 1.95
APOE-202ENST00000425718 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.24■■□□□ 1.95
APOE-202ENST00000425718 NOP56O00567 594 aaKnown RBP27.23■■□□□ 1.95
APOE-202ENST00000425718 SLC37A4O43826 429 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms