RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 PHOSPHO2Q8TCD6 241 aa18.69■□□□□ 0.58
DDR1-234ENST00000424544 GPKOWQ92917 476 aaPredicted RBP eCLIP18.69■□□□□ 0.58
DDR1-234ENST00000424544 TMEM87BQ96K49 555 aa18.69■□□□□ 0.58
DDR1-234ENST00000424544 LZTS2Q9BRK4 669 aa18.69■□□□□ 0.58
DDR1-234ENST00000424544 C16orf70Q9BSU1 422 aa18.69■□□□□ 0.58
DDR1-234ENST00000424544 NKX2-4Q9H2Z4 354 aa18.69■□□□□ 0.58
DDR1-234ENST00000424544 BCAS3Q9H6U6 928 aa18.69■□□□□ 0.58
DDR1-234ENST00000424544 PCDHA11Q9Y5I1 949 aa18.69■□□□□ 0.58
DDR1-234ENST00000424544 PIK3CDO00329 1044 aa18.68■□□□□ 0.58
DDR1-234ENST00000424544 SH2B2O14492 632 aaPredicted RBP18.68■□□□□ 0.58
DDR1-234ENST00000424544 MEIS2O14770 477 aa18.68■□□□□ 0.58
DDR1-234ENST00000424544 PRC1O43663 620 aa18.68■□□□□ 0.58
DDR1-234ENST00000424544 MYOGP15173 224 aa18.68■□□□□ 0.58
DDR1-234ENST00000424544 RABGGTBP53611 331 aa18.68■□□□□ 0.58
DDR1-234ENST00000424544 HIC1Q14526 733 aa18.68■□□□□ 0.58
DDR1-234ENST00000424544 TRAF7Q6Q0C0 670 aa18.68■□□□□ 0.58
DDR1-234ENST00000424544 FCHSD1Q86WN1 690 aa18.68■□□□□ 0.58
DDR1-234ENST00000424544 SRBD1Q8N5C6 995 aaKnown RBP18.68■□□□□ 0.58
DDR1-234ENST00000424544 USP38Q8NB14 1042 aa18.68■□□□□ 0.58
DDR1-234ENST00000424544 AFAP1L1Q8TED9 768 aa18.68■□□□□ 0.58
DDR1-234ENST00000424544 INPP4AQ96PE3 977 aaPredicted RBP18.68■□□□□ 0.58
DDR1-234ENST00000424544 MYL10Q9BUA6 226 aa18.68■□□□□ 0.58
DDR1-234ENST00000424544 KATNAL1Q9BW62 490 aa18.68■□□□□ 0.58
DDR1-234ENST00000424544 PRDM12Q9H4Q4 367 aa18.68■□□□□ 0.58
DDR1-234ENST00000424544 GBF1Q92538 1859 aa18.67■□□□□ 0.58
DDR1-234ENST00000424544 SPATA31C2B4DYI2 1134 aa18.67■□□□□ 0.58
DDR1-234ENST00000424544 STAM2O75886 525 aa18.67■□□□□ 0.58
DDR1-234ENST00000424544 GGPS1O95749 300 aa18.67■□□□□ 0.58
DDR1-234ENST00000424544 CXCL10P02778 98 aa18.67■□□□□ 0.58
DDR1-234ENST00000424544 ATP2A2P16615 1042 aaKnown RBP18.67■□□□□ 0.58
DDR1-234ENST00000424544 UBA1P22314 1058 aaKnown RBP18.67■□□□□ 0.58
DDR1-234ENST00000424544 CCND2P30279 289 aa18.67■□□□□ 0.58
DDR1-234ENST00000424544 HOXC8P31273 242 aa18.67■□□□□ 0.58
DDR1-234ENST00000424544 SEMA3FQ13275 785 aa18.67■□□□□ 0.58
DDR1-234ENST00000424544 MFSD10Q14728 455 aa18.67■□□□□ 0.58
DDR1-234ENST00000424544 KIAA0753Q2KHM9 967 aa18.67■□□□□ 0.58
DDR1-234ENST00000424544 TRIM71Q2Q1W2 868 aaKnown RBP18.67■□□□□ 0.58
DDR1-234ENST00000424544 CREB3L3Q68CJ9 461 aa18.67■□□□□ 0.58
DDR1-234ENST00000424544 ZFP91Q96JP5 570 aaPredicted RBP18.67■□□□□ 0.58
DDR1-234ENST00000424544 SLC28A3Q9HAS3 691 aa18.67■□□□□ 0.58
DDR1-234ENST00000424544 TTC28Q96AY4 2481 aa18.67■□□□□ 0.58
DDR1-234ENST00000424544 ACTN1P12814 892 aa18.66■□□□□ 0.58
DDR1-234ENST00000424544 SELPP16109 830 aa18.66■□□□□ 0.58
DDR1-234ENST00000424544 KIF5BP33176 963 aa18.66■□□□□ 0.58
DDR1-234ENST00000424544 GNAQP50148 359 aa18.66■□□□□ 0.58
DDR1-234ENST00000424544 USP17L6PQ6QN14 398 aa18.66■□□□□ 0.58
DDR1-234ENST00000424544 SGMS1Q86VZ5 419 aa18.66■□□□□ 0.58
DDR1-234ENST00000424544 C7orf31Q8N865 590 aa18.66■□□□□ 0.58
DDR1-234ENST00000424544 CTCFLQ8NI51 663 aaPredicted RBP18.66■□□□□ 0.58
DDR1-234ENST00000424544 SPATA33Q96N06 139 aa18.66■□□□□ 0.58
DDR1-234ENST00000424544 NOD1Q9Y239 953 aa18.66■□□□□ 0.58
DDR1-234ENST00000424544 XIRP2A4UGR9 3374 aa18.66■□□□□ 0.58
DDR1-234ENST00000424544 BAIAP3O94812 1187 aa18.65■□□□□ 0.58
DDR1-234ENST00000424544 PLEKHA8P1O95397 391 aa18.65■□□□□ 0.58
DDR1-234ENST00000424544 PARNO95453 639 aaKnown RBP18.65■□□□□ 0.58
DDR1-234ENST00000424544 ZNF286BP0CG31 522 aa18.65■□□□□ 0.58
DDR1-234ENST00000424544 CKBP12277 381 aa18.65■□□□□ 0.58
DDR1-234ENST00000424544 PTK7Q13308 1070 aa18.65■□□□□ 0.58
DDR1-234ENST00000424544 TSGA10IPQ3SY00 556 aa18.65■□□□□ 0.58
DDR1-234ENST00000424544 WNT8BQ93098 351 aa18.65■□□□□ 0.58
DDR1-234ENST00000424544 RRP36Q96EU6 259 aaKnown RBP18.65■□□□□ 0.58
DDR1-234ENST00000424544 SLC9A7Q96T83 725 aa18.65■□□□□ 0.58
DDR1-234ENST00000424544 SENP7Q9BQF6 1050 aa18.65■□□□□ 0.58
DDR1-234ENST00000424544 ALG1Q9BT22 464 aa18.65■□□□□ 0.58
DDR1-234ENST00000424544 TRANK1O15050 2925 aa18.65■□□□□ 0.58
DDR1-234ENST00000424544 REV3LO60673 3130 aa18.64■□□□□ 0.57
DDR1-234ENST00000424544 ZBBXA8MT70 800 aa18.64■□□□□ 0.57
DDR1-234ENST00000424544 NBNO60934 754 aa18.64■□□□□ 0.57
DDR1-234ENST00000424544 POU3F3P20264 500 aaPredicted RBP18.64■□□□□ 0.57
DDR1-234ENST00000424544 CHMP4BP1P59074 171 aa18.64■□□□□ 0.57
DDR1-234ENST00000424544 ZNF200P98182 395 aaPredicted RBP18.64■□□□□ 0.57
DDR1-234ENST00000424544 EXOSC10Q01780 885 aaKnown RBP18.64■□□□□ 0.57
DDR1-234ENST00000424544 C8orf34Q49A92 452 aa18.64■□□□□ 0.57
DDR1-234ENST00000424544 PCNX4Q63HM2 1172 aa18.64■□□□□ 0.57
DDR1-234ENST00000424544 XRRA1Q6P2D8 792 aa18.64■□□□□ 0.57
DDR1-234ENST00000424544 METTL7BQ6UX53 244 aa18.64■□□□□ 0.57
DDR1-234ENST00000424544 LRRC8DQ7L1W4 858 aa18.64■□□□□ 0.57
DDR1-234ENST00000424544 CMTR1Q8N1G2 835 aaKnown RBP18.64■□□□□ 0.57
DDR1-234ENST00000424544 CCDC155Q8N6L0 562 aa18.64■□□□□ 0.57
DDR1-234ENST00000424544 FANCBQ8NB91 859 aa18.64■□□□□ 0.57
DDR1-234ENST00000424544 PIBF1Q8WXW3 757 aa18.64■□□□□ 0.57
DDR1-234ENST00000424544 GAS2L1Q99501 681 aaPredicted RBP18.64■□□□□ 0.57
DDR1-234ENST00000424544 MLXIPQ9HAP2 919 aa18.64■□□□□ 0.57
DDR1-234ENST00000424544 TANC1Q9C0D5 1861 aa18.63■□□□□ 0.57
DDR1-234ENST00000424544 H3BRB1 525 aa18.63■□□□□ 0.57
DDR1-234ENST00000424544 EIF5BO60841 1220 aaKnown RBP18.63■□□□□ 0.57
DDR1-234ENST00000424544 CALM1P0DP23 149 aa18.63■□□□□ 0.57
DDR1-234ENST00000424544 CALM2P0DP24 149 aa18.63■□□□□ 0.57
DDR1-234ENST00000424544 CALM3P0DP25 149 aa18.63■□□□□ 0.57
DDR1-234ENST00000424544 NEDD9Q14511 834 aa18.63■□□□□ 0.57
DDR1-234ENST00000424544 MBTPS1Q14703 1052 aa18.63■□□□□ 0.57
DDR1-234ENST00000424544 GNPTABQ3T906 1256 aa18.63■□□□□ 0.57
DDR1-234ENST00000424544 HERC6Q8IVU3 1022 aa18.63■□□□□ 0.57
DDR1-234ENST00000424544 TUT1Q9H6E5 874 aaKnown RBP18.63■□□□□ 0.57
DDR1-234ENST00000424544 RTEL1Q9NZ71 1219 aa18.63■□□□□ 0.57
DDR1-234ENST00000424544 CCDC69A6NI79 296 aa18.62■□□□□ 0.57
DDR1-234ENST00000424544 RXRAP19793 462 aa18.62■□□□□ 0.57
DDR1-234ENST00000424544 TCTN1Q2MV58 587 aa18.62■□□□□ 0.57
DDR1-234ENST00000424544 PPP2R2DQ66LE6 453 aa18.62■□□□□ 0.57
DDR1-234ENST00000424544 SERINC5Q86VE9 423 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms