RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 SGMS1Q86VZ5 419 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 CCDC82Q8N4S0 544 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 TIFAQ96CG3 184 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 NEK1Q96PY6 1258 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 BCAS3Q9H6U6 928 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 NOD1Q9Y239 953 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 DOCK5Q9H7D0 1870 aa17.52■□□□□ 0.39
USB1-202ENST00000423271 TRIP12Q14669 1992 aaPredicted RBP17.51■□□□□ 0.39
USB1-202ENST00000423271 PRUNE2Q8WUY3 3088 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 CHD9Q3L8U1 2897 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 MEIS2O14770 477 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 F2P00734 622 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 HOXD8P13378 290 aaPredicted RBP17.51■□□□□ 0.39
USB1-202ENST00000423271 EXOSC10Q01780 885 aaKnown RBP17.51■□□□□ 0.39
USB1-202ENST00000423271 MFSD10Q14728 455 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 PTGISQ16647 500 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 KCNV1Q6PIU1 500 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 DEFB128Q7Z7B8 93 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 FANCBQ8NB91 859 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 SMARCC2Q8TAQ2 1214 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 SPATA33Q96N06 139 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 ALG1Q9BT22 464 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 RTEL1Q9NZ71 1219 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 TET1Q8NFU7 2136 aa17.51■□□□□ 0.39
USB1-202ENST00000423271 RBAK-RBAKDNI3L0D1 243 aa17.5■□□□□ 0.39
USB1-202ENST00000423271 HAS3O00219 553 aa17.5■□□□□ 0.39
USB1-202ENST00000423271 PITPNM1O00562 1244 aa17.5■□□□□ 0.39
USB1-202ENST00000423271 SEMA3FQ13275 785 aa17.5■□□□□ 0.39
USB1-202ENST00000423271 GRIN2CQ14957 1233 aa17.5■□□□□ 0.39
USB1-202ENST00000423271 KIAA0753Q2KHM9 967 aa17.5■□□□□ 0.39
USB1-202ENST00000423271 APOA5Q6Q788 366 aa17.5■□□□□ 0.39
USB1-202ENST00000423271 RPUSD2Q8IZ73 545 aaKnown RBP17.5■□□□□ 0.39
USB1-202ENST00000423271 DHX38Q92620 1227 aaKnown RBP17.5■□□□□ 0.39
USB1-202ENST00000423271 CUL5Q93034 780 aa17.5■□□□□ 0.39
USB1-202ENST00000423271 INPP4AQ96PE3 977 aaPredicted RBP17.5■□□□□ 0.39
USB1-202ENST00000423271 MTIF3Q9H2K0 278 aaKnown RBP17.5■□□□□ 0.39
USB1-202ENST00000423271 HDAC6Q9UBN7 1215 aa17.5■□□□□ 0.39
USB1-202ENST00000423271 GTF2IRD1Q9UHL9 959 aa17.5■□□□□ 0.39
USB1-202ENST00000423271 BRPF3Q9ULD4 1205 aa17.5■□□□□ 0.39
USB1-202ENST00000423271 GTF3C3Q9Y5Q9 886 aa17.5■□□□□ 0.39
USB1-202ENST00000423271 MYO9BQ13459 2157 aa17.5■□□□□ 0.39
USB1-202ENST00000423271 CNTNAP5Q8WYK1 1306 aa17.49■□□□□ 0.39
USB1-202ENST00000423271 ZBBXA8MT70 800 aa17.49■□□□□ 0.39
USB1-202ENST00000423271 PIK3CDO00329 1044 aa17.49■□□□□ 0.39
USB1-202ENST00000423271 IQCF3P0C7M6 154 aa17.49■□□□□ 0.39
USB1-202ENST00000423271 TGFB3P10600 412 aa17.49■□□□□ 0.39
USB1-202ENST00000423271 BFSP2Q13515 415 aa17.49■□□□□ 0.39
USB1-202ENST00000423271 UBE2SQ16763 222 aa17.49■□□□□ 0.39
USB1-202ENST00000423271 TSGA10IPQ3SY00 556 aa17.49■□□□□ 0.39
USB1-202ENST00000423271 DHX32Q7L7V1 743 aaKnown RBP17.49■□□□□ 0.39
USB1-202ENST00000423271 C7orf31Q8N865 590 aa17.49■□□□□ 0.39
USB1-202ENST00000423271 RETREG2Q8NC44 543 aa17.49■□□□□ 0.39
USB1-202ENST00000423271 KATNAL1Q9BW62 490 aa17.49■□□□□ 0.39
USB1-202ENST00000423271 ZNF576Q9H609 170 aa17.49■□□□□ 0.39
USB1-202ENST00000423271 MLXIPQ9HAP2 919 aa17.49■□□□□ 0.39
USB1-202ENST00000423271 CHD7Q9P2D1 2997 aa17.48■□□□□ 0.39
USB1-202ENST00000423271 PFKMP08237 780 aa17.48■□□□□ 0.39
USB1-202ENST00000423271 FOSL2P15408 326 aa17.48■□□□□ 0.39
USB1-202ENST00000423271 ICAM3P32942 547 aa17.48■□□□□ 0.39
USB1-202ENST00000423271 HIC1Q14526 733 aa17.48■□□□□ 0.39
USB1-202ENST00000423271 GNPTABQ3T906 1256 aa17.48■□□□□ 0.39
USB1-202ENST00000423271 PCNX4Q63HM2 1172 aa17.48■□□□□ 0.39
USB1-202ENST00000423271 HEATR3Q7Z4Q2 680 aa17.48■□□□□ 0.39
USB1-202ENST00000423271 YBX2Q9Y2T7 364 aaKnown RBP17.48■□□□□ 0.39
USB1-202ENST00000423271 TELO2Q9Y4R8 837 aa17.48■□□□□ 0.39
USB1-202ENST00000423271 SPATA31C2B4DYI2 1134 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 FIBPO43427 364 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 PPFIA4O75335 1185 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 STAM2O75886 525 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 CPA1P15085 419 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 RFC2P35250 354 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 RABGGTBP53611 331 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 ZNF200P98182 395 aaPredicted RBP17.47■□□□□ 0.39
USB1-202ENST00000423271 SYNE3Q6ZMZ3 975 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 MAFAQ8NHW3 353 aaPredicted RBP17.47■□□□□ 0.39
USB1-202ENST00000423271 CAGE1Q8TC20 777 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 WNT8BQ93098 351 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 C16orf70Q9BSU1 422 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 NKX2-4Q9H2Z4 354 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 PSTPIP2Q9H939 334 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 SLC4A7Q9Y6M7 1214 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 CUL9Q8IWT3 2517 aa17.47■□□□□ 0.39
USB1-202ENST00000423271 KLF18A0A0U1RQI7 1052 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 ZBTB43O43298 467 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 LGALS2P05162 132 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 FUT2Q10981 343 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 KRT32Q14532 448 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 GPNMBQ14956 572 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 RAB30Q15771 203 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 RTN1Q16799 776 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 WWC2Q6AWC2 1192 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 TYW1BQ6NUM6 668 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 CYFIP1Q7L576 1253 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 CCDC155Q8N6L0 562 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 AFAP1L1Q8TED9 768 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 RBM28Q9NW13 759 aaKnown RBP17.46■□□□□ 0.39
USB1-202ENST00000423271 MSRAQ9UJ68 235 aa17.46■□□□□ 0.39
USB1-202ENST00000423271 GOLGA8AA7E2F4 631 aa17.45■□□□□ 0.38
USB1-202ENST00000423271 GOLGA8BA8MQT2 603 aa17.45■□□□□ 0.38
USB1-202ENST00000423271 MYOGP15173 224 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms