RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 FBXO40Q9UH90 709 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 LRRC37A2A6NM11 1700 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 PFASO15067 1338 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 POTEB2H3BUK9 544 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 ATP9AO75110 1047 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 BMP15O95972 392 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 NR3C2P08235 984 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 MYCLP12524 364 aaPredicted RBP10.13□□□□□ -0.79
HPS4-204ENST00000422379 EDNRBP24530 442 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 ADORA2AP29274 412 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 PRPHP41219 470 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 ALDH5A1P51649 535 aaPredicted RBP10.13□□□□□ -0.79
HPS4-204ENST00000422379 SREBF2Q12772 1141 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 ITGB3BPQ13352 177 aaPredicted RBP10.13□□□□□ -0.79
HPS4-204ENST00000422379 ORC2Q13416 577 aaPredicted RBP10.13□□□□□ -0.79
HPS4-204ENST00000422379 GPR142Q7Z601 462 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 IGSF22Q8N9C0 903 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 ZNF579Q8NAF0 562 aaKnown RBP10.13□□□□□ -0.79
HPS4-204ENST00000422379 GTF3C2Q8WUA4 911 aaPredicted RBP10.13□□□□□ -0.79
HPS4-204ENST00000422379 FERMT2Q96AC1 680 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 MMP19Q99542 508 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 MXRA8Q9BRK3 442 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 TNMDQ9H2S6 317 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 VAV3Q9UKW4 847 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 CA12O43570 354 aa10.12□□□□□ -0.79
HPS4-204ENST00000422379 FCER1AP12319 257 aa10.12□□□□□ -0.79
HPS4-204ENST00000422379 PTGS1P23219 599 aa10.12□□□□□ -0.79
HPS4-204ENST00000422379 ECM1Q16610 540 aa10.12□□□□□ -0.79
HPS4-204ENST00000422379 TMEM63BQ5T3F8 832 aa10.12□□□□□ -0.79
HPS4-204ENST00000422379 DTHD1Q6ZMT9 781 aa10.12□□□□□ -0.79
HPS4-204ENST00000422379 RBM43Q6ZSC3 357 aaKnown RBP10.12□□□□□ -0.79
HPS4-204ENST00000422379 PLA2G4DQ86XP0 818 aa10.12□□□□□ -0.79
HPS4-204ENST00000422379 JMYQ8N9B5 988 aa10.12□□□□□ -0.79
HPS4-204ENST00000422379 NSUN6Q8TEA1 469 aaKnown RBP10.12□□□□□ -0.79
HPS4-204ENST00000422379 PDLIM2Q96JY6 352 aa10.12□□□□□ -0.79
HPS4-204ENST00000422379 ARHGAP39Q9C0H5 1083 aa10.12□□□□□ -0.79
HPS4-204ENST00000422379 TTC12Q9H892 705 aaPredicted RBP10.12□□□□□ -0.79
HPS4-204ENST00000422379 KCNH7Q9NS40 1196 aa10.12□□□□□ -0.79
HPS4-204ENST00000422379 PKD2L1Q9P0L9 805 aa10.12□□□□□ -0.79
HPS4-204ENST00000422379 PLXNB2O15031 1838 aa10.12□□□□□ -0.79
HPS4-204ENST00000422379 EML1O00423 815 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 LAD1O00515 517 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 DHX15O43143 795 aaKnown RBP10.11□□□□□ -0.79
HPS4-204ENST00000422379 FXR2P51116 673 aaKnown RBP eCLIP10.11□□□□□ -0.79
HPS4-204ENST00000422379 FAM160A1Q05DH4 1040 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 GRB14Q14449 540 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 KCTD2Q14681 263 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 ZNF792Q3KQV3 632 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 LONRF3Q496Y0 759 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 CKAP2LQ8IYA6 745 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 ERCC4Q92889 916 aaPredicted RBP10.11□□□□□ -0.79
HPS4-204ENST00000422379 SLC5A5Q92911 643 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 INPP4AQ96PE3 977 aaPredicted RBP10.11□□□□□ -0.79
HPS4-204ENST00000422379 AGO4Q9HCK5 861 aaKnown RBP10.11□□□□□ -0.79
HPS4-204ENST00000422379 JADE2Q9NQC1 790 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 FOXN1O15353 648 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 PSMD10O75832 226 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 TBC1D8O95759 1140 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 CCDC192P0DO97 292 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 COPB2P35606 906 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 ZNF76P36508 570 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 CCNA1P78396 465 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 SP2Q02086 613 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 TYRO3Q06418 890 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 KARSQ15046 597 aaKnown RBP10.11□□□□□ -0.79
HPS4-204ENST00000422379 E2F4Q16254 413 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 NAALADL2Q58DX5 795 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 B3GNT9Q6UX72 402 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 CCDC73Q6ZRK6 1079 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 PDILTQ8N807 584 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 DNERQ8NFT8 737 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 TRIM44Q96DX7 344 aaPredicted RBP10.11□□□□□ -0.79
HPS4-204ENST00000422379 MTRQ99707 1265 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 ZFYVE28Q9HCC9 887 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 KCNH3Q9ULD8 1083 aa10.11□□□□□ -0.79
HPS4-204ENST00000422379 DOCK3Q8IZD9 2030 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 THSD7BQ9C0I4 1608 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.1□□□□□ -0.79
HPS4-204ENST00000422379 POLR2DO15514 142 aaKnown RBP10.1□□□□□ -0.79
HPS4-204ENST00000422379 CCND2P30279 289 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 LONP1P36776 959 aaKnown RBP10.1□□□□□ -0.79
HPS4-204ENST00000422379 MTMR1Q13613 665 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 MORN1Q5T089 497 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 EEPD1Q7L9B9 569 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 NIPA1Q7RTP0 329 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 KCNK18Q7Z418 384 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 PLEKHH3Q7Z736 793 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 GRAMD1CQ8IYS0 662 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 NPLOC4Q8TAT6 608 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 PNMA5Q96PV4 448 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 PLIN2Q99541 437 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 MAF1Q9H063 256 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 EHMT1Q9H9B1 1298 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 PCDHA12Q9UN75 941 aa10.1□□□□□ -0.79
HPS4-204ENST00000422379 ZNFX1Q9P2E3 1918 aaKnown RBP10.09□□□□□ -0.79
HPS4-204ENST00000422379 A0A087WWV3 80 aa10.09□□□□□ -0.79
HPS4-204ENST00000422379 IPO5O00410 1097 aaKnown RBP10.09□□□□□ -0.79
HPS4-204ENST00000422379 TBX3O15119 743 aa10.09□□□□□ -0.79
HPS4-204ENST00000422379 ACTN4O43707 911 aaKnown RBP10.09□□□□□ -0.79
HPS4-204ENST00000422379 ZNF202O95125 648 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms