RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PDCL2Q8N4E4 241 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 SLC44A5Q8NCS7 719 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 OR6J1Q8NGC5 347 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 TEX13BQ9BXU2 312 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 PPP2R3BQ9Y5P8 575 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 PNPLA7Q6ZV29 1317 aa11.77□□□□□ -0.52
PTCH1-206ENST00000421141 PPP6R2O75170 966 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 ADAM9Q13443 819 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 MORC3Q14149 939 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 ALX1Q15699 326 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 FAM173BQ6P4H8 233 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 RRAGCQ9HB90 399 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 TRIM50Q86XT4 487 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 USTQ9Y2C2 406 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 NFE2L3Q9Y4A8 694 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 CTNND1O60716 968 aaKnown RBP11.77□□□□□ -0.53
PTCH1-206ENST00000421141 CMA1P23946 247 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 CCDC63Q8NA47 563 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 CSF1RP07333 972 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 CALCOCO2Q13137 446 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 GPRC5AQ8NFJ5 357 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 ZNF512BQ96KM6 892 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-206ENST00000421141 SLC39A2Q9NP94 309 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 LZTFL1Q9NQ48 299 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 ZNF302Q9NR11 478 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 SLC12A6Q9UHW9 1150 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 DAGLAQ9Y4D2 1042 aa11.77□□□□□ -0.53
PTCH1-206ENST00000421141 RARBP10826 455 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 TFAMQ00059 246 aaKnown RBP11.76□□□□□ -0.53
PTCH1-206ENST00000421141 KRT76Q01546 638 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 TWF2Q6IBS0 349 aaKnown RBP11.76□□□□□ -0.53
PTCH1-206ENST00000421141 MCPH1Q8NEM0 835 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 CCDC94Q9BW85 323 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-206ENST00000421141 RCAN1P53805 252 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 PGBD1Q96JS3 809 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 BCL9O00512 1426 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 PSMC2P35998 433 aaKnown RBP11.76□□□□□ -0.53
PTCH1-206ENST00000421141 TERF1P54274 439 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 PDZD4Q76G19 769 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-206ENST00000421141 CATSPER4Q7RTX7 472 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 HAUS1Q96CS2 278 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 PPP1R9BQ96SB3 815 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTCH1-206ENST00000421141 CTTNBP2NLQ9P2B4 639 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 MYH6P13533 1939 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 KCNJ6P48051 423 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 BPIFB4P59827 614 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 MYL7Q01449 175 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 NFX1Q12986 1120 aaKnown RBP11.76□□□□□ -0.53
PTCH1-206ENST00000421141 RSRC2Q7L4I2 434 aaKnown RBP11.76□□□□□ -0.53
PTCH1-206ENST00000421141 ENAHQ8N8S7 591 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-206ENST00000421141 ATP6V0A4Q9HBG4 840 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 NEDD4P46934 1319 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 ZBBXA8MT70 800 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 KCNJ18B7U540 433 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 KCNJ12Q14500 433 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 SAMD7Q7Z3H4 446 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 THEM5Q8N1Q8 247 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 GJA10Q969M2 543 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 PCDHB4Q9Y5E5 795 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 MYOM1P52179 1685 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 TKFCQ3LXA3 575 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 CDC42EP5Q6NZY7 148 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 TMTC3Q6ZXV5 915 aa11.76□□□□□ -0.53
PTCH1-206ENST00000421141 RASSF7Q02833 373 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 KIAA1468Q9P260 1216 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 SLC25A27O95847 323 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 KARSQ15046 597 aaKnown RBP11.75□□□□□ -0.53
PTCH1-206ENST00000421141 PPM1KQ8N3J5 372 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 CCDC89Q8N998 374 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 PPP1R16BQ96T49 567 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 TMEM39BQ9GZU3 492 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 MYH3P11055 1940 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 MYH13Q9UKX3 1938 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 GRM4Q14833 912 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 CCDC186Q7Z3E2 898 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 MTRQ99707 1265 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 ZNF142P52746 1687 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-206ENST00000421141 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-206ENST00000421141 ORC4O43929 436 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 TNFAIP2Q03169 654 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 PPANQ9NQ55 473 aaKnown RBP11.75□□□□□ -0.53
PTCH1-206ENST00000421141 TOPORSQ9NS56 1045 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-206ENST00000421141 NOC2LQ9Y3T9 749 aaKnown RBP11.75□□□□□ -0.53
PTCH1-206ENST00000421141 MEIS1O00470 390 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 SRGNP10124 158 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 FANCCQ00597 558 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 TAB2Q9NYJ8 693 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 IMPACTQ9P2X3 320 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 SHTN1A0MZ66 631 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 MED7O43513 233 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 PRELPP51888 382 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 PFKFB3Q16875 520 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-206ENST00000421141 PPP2R3CQ969Q6 453 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 NUDT12Q9BQG2 462 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 BRPF3Q9ULD4 1205 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 UTP11Q9Y3A2 253 aaKnown RBP11.75□□□□□ -0.53
PTCH1-206ENST00000421141 CLIC4Q9Y696 253 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 ADAMTSL3P82987 1691 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 KIF28PB7ZC32 967 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms