RNA–Protein interactions for RNA: ENST00000417996.2

KRT3-201, Transcript of keratin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT3, Length 2,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3-201ENST00000417996 USP40Q9NVE5 1235 aa22.58■■□□□ 1.21
KRT3-201ENST00000417996 TRAF5O00463 557 aa22.58■■□□□ 1.2
KRT3-201ENST00000417996 ADRA2BP18089 450 aa22.58■■□□□ 1.2
KRT3-201ENST00000417996 GFPT1Q06210 699 aaPredicted RBP22.58■■□□□ 1.2
KRT3-201ENST00000417996 CCDC40Q4G0X9 1142 aa22.58■■□□□ 1.2
KRT3-201ENST00000417996 PSTPIP2Q9H939 334 aa22.58■■□□□ 1.2
KRT3-201ENST00000417996 NLRC4Q9NPP4 1024 aa22.58■■□□□ 1.2
KRT3-201ENST00000417996 HPCAL4Q9UM19 191 aa22.58■■□□□ 1.2
KRT3-201ENST00000417996 PCDHA12Q9UN75 941 aa22.58■■□□□ 1.2
KRT3-201ENST00000417996 CAPN2P17655 700 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 SHMT1P34896 483 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 MAGEA1P43355 309 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 MRPL12P52815 198 aaKnown RBP22.57■■□□□ 1.2
KRT3-201ENST00000417996 CACNB1Q02641 598 aaPredicted RBP22.57■■□□□ 1.2
KRT3-201ENST00000417996 KCNMA1Q12791 1236 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 IQCEQ6IPM2 695 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 PDXDC1Q6P996 788 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 E9PMD0 336 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 LCA5LO95447 670 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 CXCR5P32302 372 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 NFRKBQ6P4R8 1299 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 NELFCDQ8IXH7 590 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 VIPAS39Q9H9C1 493 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 MED4Q9NPJ6 270 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 COL4A3BPQ9Y5P4 624 aa22.57■■□□□ 1.2
KRT3-201ENST00000417996 THSD7AQ9UPZ6 1657 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 NPHP3-ACAD11A0A0J9YXS1 232 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 ZBTB5O15062 677 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 DDR1Q08345 913 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 RAD51AP2Q09MP3 1159 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 FAM26FQ5R3K3 315 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 SMARCAL1Q9NZC9 954 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 SALL4Q9UJQ4 1053 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 NCK2O43639 380 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 HOXA10P31260 410 aaPredicted RBP22.56■■□□□ 1.2
KRT3-201ENST00000417996 MATR3P43243 847 aaKnown RBP eCLIP22.56■■□□□ 1.2
KRT3-201ENST00000417996 MRPS25P82663 173 aaKnown RBP22.56■■□□□ 1.2
KRT3-201ENST00000417996 FKBP3Q00688 224 aaKnown RBP22.56■■□□□ 1.2
KRT3-201ENST00000417996 RASSF7Q02833 373 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 EZH2Q15910 746 aaKnown RBP22.56■■□□□ 1.2
KRT3-201ENST00000417996 TDRD12Q587J7 1177 aaKnown RBP22.56■■□□□ 1.2
KRT3-201ENST00000417996 MUM1L1Q5H9M0 696 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 CCNI2Q6ZMN8 369 aaPredicted RBP22.56■■□□□ 1.2
KRT3-201ENST00000417996 GOLGA5Q8TBA6 731 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 ALS2CR12Q96Q35 445 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 KIAA1024Q9UPX6 916 aa22.56■■□□□ 1.2
KRT3-201ENST00000417996 USP17L15C9J2P7 530 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 USP17L13C9JLJ4 530 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 USP17L11C9JVI0 530 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 USP17L18D6R9N7 530 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 USP17L22D6RA61 530 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 USP17L17D6RBQ6 530 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 USP17L19D6RCP7 530 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 USP17L20D6RJB6 530 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 PPEF1O14829 653 aaPredicted RBP22.55■■□□□ 1.2
KRT3-201ENST00000417996 RNF40O75150 1001 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 SYF2O95926 243 aaKnown RBP22.55■■□□□ 1.2
KRT3-201ENST00000417996 ACTN2P35609 894 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 USP17L24Q0WX57 530 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 ZCWPW2Q504Y3 356 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 USP17L6PQ6QN14 398 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 PROM2Q8N271 834 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 OSBPL9Q96SU4 736 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 FAM204AQ9H8W3 233 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 KANSL2Q9H9L4 492 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 EHD2Q9NZN4 543 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 SWAP70Q9UH65 585 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 MYH7BA7E2Y1 1941 aa22.55■■□□□ 1.2
KRT3-201ENST00000417996 SLC1A4P43007 532 aa22.54■■□□□ 1.2
KRT3-201ENST00000417996 DOK7Q18PE1 504 aa22.54■■□□□ 1.2
KRT3-201ENST00000417996 CRAMP1Q96RY5 1269 aa22.54■■□□□ 1.2
KRT3-201ENST00000417996 SELENOOQ9BVL4 669 aa22.54■■□□□ 1.2
KRT3-201ENST00000417996 BMP2KQ9NSY1 1161 aaPredicted RBP22.54■■□□□ 1.2
KRT3-201ENST00000417996 A0A0U1RQG5 324 aaPredicted RBP22.54■■□□□ 1.2
KRT3-201ENST00000417996 BUB1O43683 1085 aa22.54■■□□□ 1.2
KRT3-201ENST00000417996 APBA1Q02410 837 aa22.54■■□□□ 1.2
KRT3-201ENST00000417996 GPATCH4Q5T3I0 446 aaKnown RBP22.54■■□□□ 1.2
KRT3-201ENST00000417996 CCDC70Q6NSX1 233 aa22.54■■□□□ 1.2
KRT3-201ENST00000417996 LEKR1Q6ZMV7 388 aa22.54■■□□□ 1.2
KRT3-201ENST00000417996 HDAC7Q8WUI4 952 aa22.54■■□□□ 1.2
KRT3-201ENST00000417996 RIN2Q8WYP3 895 aaPredicted RBP22.54■■□□□ 1.2
KRT3-201ENST00000417996 COA1Q9GZY4 146 aa22.54■■□□□ 1.2
KRT3-201ENST00000417996 POTEB3A0JP26 581 aa22.53■■□□□ 1.2
KRT3-201ENST00000417996 POTECB2RU33 542 aa22.53■■□□□ 1.2
KRT3-201ENST00000417996 AARSP49588 968 aaKnown RBP eCLIP22.53■■□□□ 1.2
KRT3-201ENST00000417996 NAP1L1P55209 391 aaKnown RBP22.53■■□□□ 1.2
KRT3-201ENST00000417996 HGSNATQ68CP4 663 aa22.53■■□□□ 1.2
KRT3-201ENST00000417996 POTEBQ6S5H4 581 aa22.53■■□□□ 1.2
KRT3-201ENST00000417996 TMC4Q7Z404 712 aa22.53■■□□□ 1.2
KRT3-201ENST00000417996 CRACR2AQ9BSW2 395 aa22.53■■□□□ 1.2
KRT3-201ENST00000417996 LRRC1Q9BTT6 524 aa22.53■■□□□ 1.2
KRT3-201ENST00000417996 LSM14BQ9BX40 385 aaKnown RBP22.53■■□□□ 1.2
KRT3-201ENST00000417996 PLA2G4BP0C869 781 aa22.53■■□□□ 1.2
KRT3-201ENST00000417996 ASTE1Q2TB18 679 aaPredicted RBP22.53■■□□□ 1.2
KRT3-201ENST00000417996 CDC42EP5Q6NZY7 148 aa22.53■■□□□ 1.2
KRT3-201ENST00000417996 GPBP1Q86WP2 473 aa22.53■■□□□ 1.2
KRT3-201ENST00000417996 NT5C3AQ9H0P0 336 aa22.53■■□□□ 1.2
KRT3-201ENST00000417996 HYOU1Q9Y4L1 999 aa22.53■■□□□ 1.2
KRT3-201ENST00000417996 GCFC2P16383 781 aaKnown RBP22.52■■□□□ 1.2
KRT3-201ENST00000417996 STAT3P40763 770 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms