RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 KCNV1Q6PIU1 500 aa11.69□□□□□ -0.54
MDC1-202ENST00000416571 MYOCDQ8IZQ8 938 aa11.69□□□□□ -0.54
MDC1-202ENST00000416571 GJD3Q8N144 294 aa11.69□□□□□ -0.54
MDC1-202ENST00000416571 KHSRPQ92945 711 aaKnown RBP eCLIP11.69□□□□□ -0.54
MDC1-202ENST00000416571 VAT1LQ9HCJ6 419 aa11.69□□□□□ -0.54
MDC1-202ENST00000416571 CTNNA3Q9UI47 895 aa11.69□□□□□ -0.54
MDC1-202ENST00000416571 LAMA4Q16363 1823 aa11.69□□□□□ -0.54
MDC1-202ENST00000416571 RSPH10B2B2RC85 870 aa11.68□□□□□ -0.54
MDC1-202ENST00000416571 PI4K2BG5E9Z4 385 aa11.68□□□□□ -0.54
MDC1-202ENST00000416571 HAS3O00219 553 aa11.68□□□□□ -0.54
MDC1-202ENST00000416571 RSPH10BP0C881 870 aa11.68□□□□□ -0.54
MDC1-202ENST00000416571 MYCLP12524 364 aaPredicted RBP11.68□□□□□ -0.54
MDC1-202ENST00000416571 THPOP40225 353 aa11.68□□□□□ -0.54
MDC1-202ENST00000416571 PTPROQ16827 1216 aa11.68□□□□□ -0.54
MDC1-202ENST00000416571 LEXMQ3ZCV2 418 aa11.68□□□□□ -0.54
MDC1-202ENST00000416571 SPATA33Q96N06 139 aa11.68□□□□□ -0.54
MDC1-202ENST00000416571 ZSCAN10Q96SZ4 725 aaPredicted RBP11.68□□□□□ -0.54
MDC1-202ENST00000416571 C17orf80Q9BSJ5 609 aa11.68□□□□□ -0.54
MDC1-202ENST00000416571 AMNQ9BXJ7 453 aa11.68□□□□□ -0.54
MDC1-202ENST00000416571 PXMP2Q9NR77 195 aa11.68□□□□□ -0.54
MDC1-202ENST00000416571 MICAL3Q7RTP6 2002 aa11.68□□□□□ -0.54
MDC1-202ENST00000416571 BRWD1Q9NSI6 2320 aa11.68□□□□□ -0.54
MDC1-202ENST00000416571 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.67□□□□□ -0.54
MDC1-202ENST00000416571 C17orf102A2RUQ5 167 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 PRR33A8MZF0 331 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 SORBS3O60504 671 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 PPFIA4O75335 1185 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 ZNF200P98182 395 aaPredicted RBP11.67□□□□□ -0.54
MDC1-202ENST00000416571 CSPP1Q1MSJ5 1256 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 TCTN1Q2MV58 587 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 PUS10Q3MIT2 529 aaKnown RBP11.67□□□□□ -0.54
MDC1-202ENST00000416571 PTCRAQ6ISU1 281 aaPredicted RBP11.67□□□□□ -0.54
MDC1-202ENST00000416571 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.67□□□□□ -0.54
MDC1-202ENST00000416571 EP400NLQ6ZTU2 488 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 FAM178BQ8IXR5 827 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 DBF4BQ8NFT6 615 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 SAMD11Q96NU1 681 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 YME1L1Q96TA2 773 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 JMJD4Q9H9V9 463 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 CD320Q9NPF0 282 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 C11orf16Q9NQ32 467 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 CACNA1GO43497 2377 aa11.67□□□□□ -0.54
MDC1-202ENST00000416571 B4E1Z4 1266 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 GGPS1O95749 300 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 ALADP13716 330 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 IL9P15248 144 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 MBTPS1Q14703 1052 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 IMMTQ16891 758 aaKnown RBP11.66□□□□□ -0.54
MDC1-202ENST00000416571 TRIM71Q2Q1W2 868 aaKnown RBP11.66□□□□□ -0.54
MDC1-202ENST00000416571 HSDL1Q3SXM5 330 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 TIGD5Q53EQ6 642 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 MYSM1Q5VVJ2 828 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 TRAF7Q6Q0C0 670 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.66□□□□□ -0.54
MDC1-202ENST00000416571 SEPT8Q92599 483 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 ATP6V0A1Q93050 837 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 WNT8BQ93098 351 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 MRPL38Q96DV4 380 aaKnown RBP11.66□□□□□ -0.54
MDC1-202ENST00000416571 UIMC1Q96RL1 719 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 UBAC1Q9BSL1 405 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 MLXIPQ9HAP2 919 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 DIAPH3Q9NSV4 1193 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 MAP3K20Q9NYL2 800 aaKnown RBP11.66□□□□□ -0.54
MDC1-202ENST00000416571 FAM50BQ9Y247 325 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 NLRC5Q86WI3 1866 aa11.66□□□□□ -0.54
MDC1-202ENST00000416571 TGFB3P10600 412 aa11.65□□□□□ -0.54
MDC1-202ENST00000416571 HOXD8P13378 290 aaPredicted RBP11.65□□□□□ -0.54
MDC1-202ENST00000416571 SDSP20132 328 aa11.65□□□□□ -0.54
MDC1-202ENST00000416571 HSD17B4P51659 736 aa11.65□□□□□ -0.54
MDC1-202ENST00000416571 HTRA4P83105 476 aaPredicted RBP11.65□□□□□ -0.54
MDC1-202ENST00000416571 TRAF1Q13077 416 aa11.65□□□□□ -0.54
MDC1-202ENST00000416571 GPM6BQ13491 265 aa11.65□□□□□ -0.54
MDC1-202ENST00000416571 PGM5Q15124 567 aa11.65□□□□□ -0.54
MDC1-202ENST00000416571 EPC2Q52LR7 807 aa11.65□□□□□ -0.54
MDC1-202ENST00000416571 CELF3Q5SZQ8 465 aaKnown RBP11.65□□□□□ -0.54
MDC1-202ENST00000416571 IFIT1BQ5T764 474 aaKnown RBP11.65□□□□□ -0.54
MDC1-202ENST00000416571 SERINC5Q86VE9 423 aa11.65□□□□□ -0.54
MDC1-202ENST00000416571 ENAHQ8N8S7 591 aaPredicted RBP11.65□□□□□ -0.54
MDC1-202ENST00000416571 ANKS1AQ92625 1134 aa11.65□□□□□ -0.54
MDC1-202ENST00000416571 PDCD2LQ9BRP1 358 aa11.65□□□□□ -0.54
MDC1-202ENST00000416571 KRT23Q9C075 422 aa11.65□□□□□ -0.54
MDC1-202ENST00000416571 LNPKQ9C0E8 428 aa11.65□□□□□ -0.54
MDC1-202ENST00000416571 PCDHA1Q9Y5I3 950 aa11.65□□□□□ -0.54
MDC1-202ENST00000416571 GRXCR2A6NFK2 248 aa11.64□□□□□ -0.55
MDC1-202ENST00000416571 H3BQ06 376 aaPredicted RBP11.64□□□□□ -0.55
MDC1-202ENST00000416571 H3BRB1 525 aa11.64□□□□□ -0.55
MDC1-202ENST00000416571 NOP56O00567 594 aaKnown RBP11.64□□□□□ -0.55
MDC1-202ENST00000416571 ZBTB5O15062 677 aa11.64□□□□□ -0.55
MDC1-202ENST00000416571 UPP2O95045 317 aa11.64□□□□□ -0.55
MDC1-202ENST00000416571 UBA1P22314 1058 aaKnown RBP11.64□□□□□ -0.55
MDC1-202ENST00000416571 CCND2P30279 289 aa11.64□□□□□ -0.55
MDC1-202ENST00000416571 HOXA13P31271 388 aaPredicted RBP11.64□□□□□ -0.55
MDC1-202ENST00000416571 PLEKHG4Q58EX7 1191 aa11.64□□□□□ -0.55
MDC1-202ENST00000416571 CWC27Q6UX04 472 aaKnown RBP11.64□□□□□ -0.55
MDC1-202ENST00000416571 HOMER1Q86YM7 354 aa11.64□□□□□ -0.55
MDC1-202ENST00000416571 SAMD3Q8N6K7 520 aa11.64□□□□□ -0.55
MDC1-202ENST00000416571 BANK1Q8NDB2 785 aa11.64□□□□□ -0.55
MDC1-202ENST00000416571 SP7Q8TDD2 431 aaPredicted RBP11.64□□□□□ -0.55
MDC1-202ENST00000416571 C16orf70Q9BSU1 422 aa11.64□□□□□ -0.55
MDC1-202ENST00000416571 TUT1Q9H6E5 874 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms