RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 GFPT2O94808 682 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 TRIP13Q15645 432 aaPredicted RBP14.06□□□□□ -0.16
SCN1B-202ENST00000415950 FOXR1Q6PIV2 292 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 NAP1L4Q99733 375 aaKnown RBP14.06□□□□□ -0.16
SCN1B-202ENST00000415950 NUCKS1Q9H1E3 243 aaKnown RBP14.06□□□□□ -0.16
SCN1B-202ENST00000415950 CCDC87Q9NVE4 849 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.06□□□□□ -0.16
SCN1B-202ENST00000415950 POTEMA6NI47 508 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 GYPCP04921 128 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 TROVE2P10155 538 aaKnown RBP eCLIP14.05□□□□□ -0.16
SCN1B-202ENST00000415950 MCTP2Q6DN12 878 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 PALM2Q8IXS6 379 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 PPM1KQ8N3J5 372 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 GPR101Q96P66 508 aaPredicted RBP14.05□□□□□ -0.16
SCN1B-202ENST00000415950 LCMT1Q9UIC8 334 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 TUBE1Q9UJT0 475 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 ABCA6Q8N139 1617 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 LGALS16A8MUM7 142 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 POC1B-GALNT4F8VUJ3 575 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 KIF3CO14782 793 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 KLK7P49862 253 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 FOXO4P98177 505 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 MAN2A1Q16706 1144 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 CNBD1Q8NA66 436 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 DHTKD1Q96HY7 919 aaPredicted RBP14.05□□□□□ -0.16
SCN1B-202ENST00000415950 ADD3Q9UEY8 706 aaKnown RBP14.05□□□□□ -0.16
SCN1B-202ENST00000415950 A0A0U1RQJ8 604 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 ERVV-2B6SEH9 535 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 FKBP3Q00688 224 aaKnown RBP14.05□□□□□ -0.16
SCN1B-202ENST00000415950 STRN3Q13033 797 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 PARP10Q53GL7 1025 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 FOXP4Q8IVH2 680 aaPredicted RBP14.05□□□□□ -0.16
SCN1B-202ENST00000415950 RETREG2Q8NC44 543 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.05□□□□□ -0.16
SCN1B-202ENST00000415950 ELAC2Q9BQ52 826 aaKnown RBP14.05□□□□□ -0.16
SCN1B-202ENST00000415950 GOLPH3Q9H4A6 298 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 RASSF2P50749 326 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 NR1I3Q14994 352 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 UBE2SQ16763 222 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 SPATA4Q8NEY3 305 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 PSTPIP2Q9H939 334 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 PCDHA4Q9UN74 947 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 HPS5Q9UPZ3 1129 aa14.05□□□□□ -0.16
SCN1B-202ENST00000415950 GSG1L2A8MUP6 293 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 SCNN1DP51172 638 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 NCAPHQ15003 741 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 KAZNQ674X7 775 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 CYP4F22Q6NT55 531 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 PRPF3O43395 683 aaKnown RBP14.04□□□□□ -0.16
SCN1B-202ENST00000415950 GTF2IP78347 998 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 MFSD14BQ5SR56 506 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 LRRC43Q8N309 656 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 TMEM51Q9NW97 253 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 SORBS3O60504 671 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 PRDX5P30044 214 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 KCTD19Q17RG1 926 aaPredicted RBP14.04□□□□□ -0.16
SCN1B-202ENST00000415950 LGSNQ5TDP6 509 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 OR2W6PQ8NHA6 318 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 OSBPL9Q96SU4 736 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 BCS1LQ9Y276 419 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 SNX24Q9Y343 169 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 AFG3L2Q9Y4W6 797 aa14.04□□□□□ -0.16
SCN1B-202ENST00000415950 A0A1B0GTH6 734 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 ZWINTO95229 277 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 TXNRD1Q16881 649 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 DPP8Q6V1X1 898 aaPredicted RBP14.03□□□□□ -0.16
SCN1B-202ENST00000415950 GDAP1Q8TB36 358 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 DDX25Q9UHL0 483 aaKnown RBP14.03□□□□□ -0.16
SCN1B-202ENST00000415950 THRAP3Q9Y2W1 955 aaKnown RBP14.03□□□□□ -0.16
SCN1B-202ENST00000415950 DAAM1Q9Y4D1 1078 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 USH1CQ9Y6N9 552 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 TTC36A6NLP5 189 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 DLATP10515 647 aaKnown RBP14.03□□□□□ -0.16
SCN1B-202ENST00000415950 GUCY2CP25092 1073 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 COG7P83436 770 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 PHLDB3Q6NSJ2 640 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 CCDC197Q8NCU1 140 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 KLHL29Q96CT2 875 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 ALDH8A1Q9H2A2 487 aaPredicted RBP14.03□□□□□ -0.16
SCN1B-202ENST00000415950 ZNF148Q9UQR1 794 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 ZNF211Q13398 564 aaPredicted RBP14.03□□□□□ -0.16
SCN1B-202ENST00000415950 PRKG1Q13976 671 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 SCYL2Q6P3W7 929 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 ALKBH5Q6P6C2 394 aaKnown RBP14.03□□□□□ -0.16
SCN1B-202ENST00000415950 CEP128Q6ZU80 1094 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 SMIM5Q71RC9 77 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 GAS7O60861 476 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 SH2D4BQ5SQS7 431 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 KCTD1Q719H9 257 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 SCYL3Q8IZE3 742 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 EXOC7Q9UPT5 735 aa14.03□□□□□ -0.16
SCN1B-202ENST00000415950 LRRIQ3A6PVS8 624 aaPredicted RBP14.02□□□□□ -0.16
SCN1B-202ENST00000415950 IGDCC4Q8TDY8 1250 aa14.02□□□□□ -0.16
SCN1B-202ENST00000415950 RIC8AQ9NPQ8 531 aa14.02□□□□□ -0.16
SCN1B-202ENST00000415950 USP42Q9H9J4 1324 aaKnown RBP14.02□□□□□ -0.16
SCN1B-202ENST00000415950 SAT1P21673 171 aa14.02□□□□□ -0.16
SCN1B-202ENST00000415950 MAGOHP61326 146 aaKnown RBP14.02□□□□□ -0.16
SCN1B-202ENST00000415950 HDLBPQ00341 1268 aaKnown RBP14.02□□□□□ -0.16
SCN1B-202ENST00000415950 BEND6Q5SZJ8 279 aaPredicted RBP14.02□□□□□ -0.16
SCN1B-202ENST00000415950 SPICE1Q8N0Z3 855 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms