RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 TYRP1P17643 537 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 PMLP29590 882 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 ADD2P35612 726 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 RXRGP48443 463 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 ST13P50502 369 aaKnown RBP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 RBM6P78332 1123 aaKnown RBP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 PURAQ00577 322 aaKnown RBP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 SLC7A5Q01650 507 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 FMR1Q06787 632 aaKnown RBP eCLIP4.17□□□□□ -1.742e-7■■□□□ 13.9
SF3B1-203ENST00000414174 AP3B2Q13367 1082 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 PKN2Q16513 984 aaKnown RBP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 KCNMB1Q16558 191 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 KIF4BQ2VIQ3 1234 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 ISM2Q6H9L7 571 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 HIBCHQ6NVY1 386 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 ABRAXAS1Q6UWZ7 409 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 MPRIPQ6WCQ1 1025 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 SYNE3Q6ZMZ3 975 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 RTL10Q7L3V2 364 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 CATSPER4Q7RTX7 472 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 TMC4Q7Z404 712 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 ZNF354CQ86Y25 554 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 TBC1D22AQ8WUA7 517 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 RTF1Q92541 710 aaKnown RBP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 FAM81BQ96LP2 452 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 TBATAQ96M53 351 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 MOGAT1Q96PD6 335 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 GBP4Q96PP9 640 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 SRPK1Q96SB4 655 aaKnown RBP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 BAG1Q99933 345 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.17□□□□□ -1.748e-41■□□□□ 9.4
SF3B1-203ENST00000414174 TCHPQ9BT92 498 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 AP1M1Q9BXS5 423 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 MRPL9Q9BYD2 267 aaKnown RBP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 PNNQ9H307 717 aaKnown RBP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 DBNDD1Q9H9R9 158 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 DISC1Q9NRI5 854 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 CRIM1Q9NZV1 1036 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 SIRPGQ9P1W8 387 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 FBXO10Q9UK96 956 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 BARX2Q9UMQ3 279 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 TRAK1Q9UPV9 953 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 SPG7Q9UQ90 795 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 ATP6V0A2Q9Y487 856 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 DAAM1Q9Y4D1 1078 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 SYNGAP1Q96PV0 1343 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 GPRASP1Q5JY77 1395 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 A0A0B4J203 849 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 ALG1L2C9J202 215 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 H0YHG0 523 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 K7ENM7 598 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 SORBS3O60504 671 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 BAG2O95816 211 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 GSTP1P09211 210 aaKnown RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 C1QTNF9P0C862 333 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 HARSP12081 509 aaKnown RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 POU3F3P20264 500 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 TNFAIP3P21580 790 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 ASPAP45381 313 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 STT3AP46977 705 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 PAPOLAP51003 745 aaKnown RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 CHMP4BP1P59074 171 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 GABREP78334 506 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 MECOMQ03112 1051 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 NSUN2Q08J23 767 aaKnown RBP eCLIP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 CHAF1AQ13111 956 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 STK3Q13188 491 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 PDE3AQ14432 1141 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 PREPLQ4J6C6 727 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 RASIP1Q5U651 963 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 KCNV1Q6PIU1 500 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 SLC4A10Q6U841 1118 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 FIP1L1Q6UN15 594 aaKnown RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 USP51Q70EK9 711 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 BEND5Q7L4P6 421 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 LRP10Q7Z4F1 713 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 MAATS1Q7Z4T9 603 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 HOMER1Q86YM7 354 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 LRRC49Q8IUZ0 686 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 ZNF654Q8IZM8 581 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 PLD6Q8N2A8 252 aaKnown RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 FAM184AQ8NB25 1140 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 OR8H1Q8NGG4 311 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 SPATA18Q8TC71 538 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 BRSK1Q8TDC3 778 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 ANKRD49Q8WVL7 239 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 JPH3Q8WXH2 748 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 ZNF75CPQ92670 426 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 NAF1Q96HR8 494 aaKnown RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 FANCD2OSQ96PS1 177 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 UTP14AQ9BVJ6 771 aaKnown RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 OSBPL7Q9BZF2 842 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 TRIM8Q9BZR9 551 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 MRS2Q9HD23 443 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 DDX21Q9NR30 783 aaKnown RBP eCLIP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 SMYD2Q9NRG4 433 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 RASSF1Q9NS23 344 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms