RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 KCNQ5Q9NR82 932 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 SUN2Q9UH99 717 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.47□□□□□ -0.73
SNHG3-201ENST00000413987 MAGED1Q9Y5V3 778 aaPredicted RBP10.47□□□□□ -0.73
SNHG3-201ENST00000413987 BECN2A8MW95 431 aa10.46□□□□□ -0.73
SNHG3-201ENST00000413987 CCDC159P0C7I6 412 aa10.46□□□□□ -0.73
SNHG3-201ENST00000413987 PDE6AP16499 860 aa10.46□□□□□ -0.73
SNHG3-201ENST00000413987 STT3AP46977 705 aa10.46□□□□□ -0.73
SNHG3-201ENST00000413987 TMED1Q13445 227 aa10.46□□□□□ -0.73
SNHG3-201ENST00000413987 PPP2R5BQ15173 497 aa10.46□□□□□ -0.73
SNHG3-201ENST00000413987 STX1AQ16623 288 aa10.46□□□□□ -0.73
SNHG3-201ENST00000413987 ERCC6LQ2NKX8 1250 aa10.46□□□□□ -0.73
SNHG3-201ENST00000413987 TAF4BQ92750 862 aa10.46□□□□□ -0.73
SNHG3-201ENST00000413987 LRP2BPQ9P2M1 347 aa10.46□□□□□ -0.73
SNHG3-201ENST00000413987 MKL2Q9ULH7 1088 aa10.46□□□□□ -0.73
SNHG3-201ENST00000413987 TMEM110-MUSTN1A8MSY1 372 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 INMTO95050 263 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 CPA1P15085 419 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 ROR1Q01973 937 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 KIF22Q14807 665 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 MCMDC2Q4G0Z9 681 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 ARHGAP29Q52LW3 1261 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 ZMYM1Q5SVZ6 1142 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 STYK1Q6J9G0 422 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 CCDC150Q8NCX0 1101 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 NLGN2Q8NFZ4 835 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 BICD2Q8TD16 824 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 N4BP2L2Q92802 583 aaPredicted RBP10.46□□□□□ -0.74
SNHG3-201ENST00000413987 OSBPL5Q9H0X9 879 aaPredicted RBP10.46□□□□□ -0.74
SNHG3-201ENST00000413987 DBNDD1Q9H9R9 158 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 PSD3Q9NYI0 1048 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 TBK1Q9UHD2 729 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 GTF2IRD1Q9UHL9 959 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 CD2APQ9Y5K6 639 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 MYH13Q9UKX3 1938 aa10.46□□□□□ -0.74
SNHG3-201ENST00000413987 TCRBV5S4A2TA0A5A2 114 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 FOXP2O15409 715 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 TYRP1P17643 537 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 KCNH2Q12809 1159 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 ANKRD1Q15327 319 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 LEO1Q8WVC0 666 aaPredicted RBP10.45□□□□□ -0.74
SNHG3-201ENST00000413987 IPCEF1Q8WWN9 437 aaPredicted RBP10.45□□□□□ -0.74
SNHG3-201ENST00000413987 EIF2AK1Q9BQI3 630 aaKnown RBP10.45□□□□□ -0.74
SNHG3-201ENST00000413987 TRIM6Q9C030 488 aaPredicted RBP10.45□□□□□ -0.74
SNHG3-201ENST00000413987 CD209Q9NNX6 404 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 TRMT1Q9NXH9 659 aaKnown RBP10.45□□□□□ -0.74
SNHG3-201ENST00000413987 RSPH14Q9UHP6 348 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 FBXO10Q9UK96 956 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 DGKBQ9Y6T7 804 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 MYH7P12883 1935 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 CHD4Q14839 1912 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 IQCA1LA6NCM1 817 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 HIP1O00291 1037 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 ARIH2O95376 493 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 LARGE1O95461 756 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 RAC2P15153 192 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 ZKSCAN1P17029 563 aaPredicted RBP10.45□□□□□ -0.74
SNHG3-201ENST00000413987 PSMA5P28066 241 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 APOBRQ0VD83 1088 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 TCEA2Q15560 299 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 CT47A1Q5JQC4 288 aaPredicted RBP10.45□□□□□ -0.74
SNHG3-201ENST00000413987 GOLGA5Q8TBA6 731 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 C7orf43Q8WVR3 580 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 HVCN1Q96D96 273 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 TRERF1Q96PN7 1200 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 SLX1AQ9BQ83 275 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 SARGQ9BW04 601 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 UBXN6Q9BZV1 441 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 MRGBPQ9NV56 204 aa10.45□□□□□ -0.74
SNHG3-201ENST00000413987 RBM8AQ9Y5S9 174 aaKnown RBP10.45□□□□□ -0.74
SNHG3-201ENST00000413987 GPAA1O43292 621 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 ECEL1O95672 775 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 IGHA2P01877 340 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 PAX7P23759 505 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 RXRGP48443 463 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 COPAP53621 1224 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 NR1H3Q13133 447 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 ZSCAN26Q16670 478 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 AOC3Q16853 763 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 ADCK5Q3MIX3 580 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 ZNF804AQ7Z570 1209 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 TTLL6Q8N841 843 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 CNKSR1Q969H4 720 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 JAKMIP1Q96N16 626 aaKnown RBP10.44□□□□□ -0.74
SNHG3-201ENST00000413987 ELAC2Q9BQ52 826 aaKnown RBP10.44□□□□□ -0.74
SNHG3-201ENST00000413987 NAT10Q9H0A0 1025 aaKnown RBP10.44□□□□□ -0.74
SNHG3-201ENST00000413987 BRMS1Q9HCU9 246 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 ANO10Q9NW15 660 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
SNHG3-201ENST00000413987 DENND2AQ9ULE3 1009 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 PHLPP2Q6ZVD8 1323 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 DOCK2Q92608 1830 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 KIAA1551Q9HCM1 1747 aa10.44□□□□□ -0.74
SNHG3-201ENST00000413987 VSTM5A8MXK1 200 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 MYO1CO00159 1063 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 CPLX1O14810 134 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 PRKAB2O43741 272 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 CD46P15529 392 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 NOP2P46087 812 aaKnown RBP10.43□□□□□ -0.74
SNHG3-201ENST00000413987 MAP3K12Q12852 859 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms