RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 TAF6LQ9Y6J9 622 aa28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 MYH7BA7E2Y1 1941 aa28.34■■■□□ 2.13
AC005540.1-201ENST00000413911 CXCL10P02778 98 aa28.34■■■□□ 2.13
AC005540.1-201ENST00000413911 HOXD8P13378 290 aaPredicted RBP28.34■■■□□ 2.13
AC005540.1-201ENST00000413911 BMP1P13497 986 aa28.34■■■□□ 2.13
AC005540.1-201ENST00000413911 DEFB103AP81534 67 aa28.34■■■□□ 2.13
AC005540.1-201ENST00000413911 KIAA0753Q2KHM9 967 aa28.34■■■□□ 2.13
AC005540.1-201ENST00000413911 MYSM1Q5VVJ2 828 aa28.34■■■□□ 2.13
AC005540.1-201ENST00000413911 VSIG10LQ86VR7 867 aa28.34■■■□□ 2.13
AC005540.1-201ENST00000413911 DHX37Q8IY37 1157 aaKnown RBP28.34■■■□□ 2.13
AC005540.1-201ENST00000413911 C7orf31Q8N865 590 aa28.34■■■□□ 2.13
AC005540.1-201ENST00000413911 GPKOWQ92917 476 aaPredicted RBP eCLIP28.34■■■□□ 2.13
AC005540.1-201ENST00000413911 PTH1RQ03431 593 aa28.33■■■□□ 2.13
AC005540.1-201ENST00000413911 PGM5Q15124 567 aa28.33■■■□□ 2.13
AC005540.1-201ENST00000413911 HSDL1Q3SXM5 330 aa28.33■■■□□ 2.13
AC005540.1-201ENST00000413911 PIGSQ96S52 555 aa28.33■■■□□ 2.13
AC005540.1-201ENST00000413911 TCF20Q9UGU0 1960 aaKnown RBP28.32■■■□□ 2.12
AC005540.1-201ENST00000413911 KIF28PB7ZC32 967 aa28.32■■■□□ 2.12
AC005540.1-201ENST00000413911 CYTH3O43739 400 aa28.32■■■□□ 2.12
AC005540.1-201ENST00000413911 TLL1O43897 1013 aa28.32■■■□□ 2.12
AC005540.1-201ENST00000413911 LPXNO60711 386 aa28.32■■■□□ 2.12
AC005540.1-201ENST00000413911 CYP21A2P08686 494 aa28.32■■■□□ 2.12
AC005540.1-201ENST00000413911 MBTPS1Q14703 1052 aa28.32■■■□□ 2.12
AC005540.1-201ENST00000413911 HOMER1Q86YM7 354 aa28.32■■■□□ 2.12
AC005540.1-201ENST00000413911 BCAS3Q9H6U6 928 aa28.32■■■□□ 2.12
AC005540.1-201ENST00000413911 RIOX1Q9H6W3 641 aa28.32■■■□□ 2.12
AC005540.1-201ENST00000413911 KCNJ6P48051 423 aa28.31■■■□□ 2.12
AC005540.1-201ENST00000413911 KCNQ1P51787 676 aa28.31■■■□□ 2.12
AC005540.1-201ENST00000413911 GRB10Q13322 594 aa28.31■■■□□ 2.12
AC005540.1-201ENST00000413911 GRM4Q14833 912 aa28.31■■■□□ 2.12
AC005540.1-201ENST00000413911 CELF3Q5SZQ8 465 aaKnown RBP28.31■■■□□ 2.12
AC005540.1-201ENST00000413911 TTC22Q5TAA0 569 aa28.31■■■□□ 2.12
AC005540.1-201ENST00000413911 CNKSR3Q6P9H4 555 aa28.31■■■□□ 2.12
AC005540.1-201ENST00000413911 TSPYL2Q9H2G4 693 aaPredicted RBP28.31■■■□□ 2.12
AC005540.1-201ENST00000413911 BAZ2BQ9UIF8 2168 aaKnown RBP28.31■■■□□ 2.12
AC005540.1-201ENST00000413911 GTPBP6O43824 516 aaPredicted RBP28.3■■■□□ 2.12
AC005540.1-201ENST00000413911 GGPS1O95749 300 aa28.3■■■□□ 2.12
AC005540.1-201ENST00000413911 PTK7Q13308 1070 aa28.3■■■□□ 2.12
AC005540.1-201ENST00000413911 SKIV2LQ15477 1246 aaKnown RBP28.3■■■□□ 2.12
AC005540.1-201ENST00000413911 ZNF618Q5T7W0 954 aa28.3■■■□□ 2.12
AC005540.1-201ENST00000413911 KATNAL1Q9BW62 490 aa28.3■■■□□ 2.12
AC005540.1-201ENST00000413911 MAP3K20Q9NYL2 800 aaKnown RBP28.3■■■□□ 2.12
AC005540.1-201ENST00000413911 PPFIA4O75335 1185 aa28.29■■■□□ 2.12
AC005540.1-201ENST00000413911 UBA1P22314 1058 aaKnown RBP28.29■■■□□ 2.12
AC005540.1-201ENST00000413911 SPATA33Q96N06 139 aa28.29■■■□□ 2.12
AC005540.1-201ENST00000413911 C16orf70Q9BSU1 422 aa28.29■■■□□ 2.12
AC005540.1-201ENST00000413911 TROAPQ12815 778 aa28.28■■■□□ 2.12
AC005540.1-201ENST00000413911 COL4A4P53420 1690 aaPredicted RBP28.28■■■□□ 2.12
AC005540.1-201ENST00000413911 IFIT3O14879 490 aaKnown RBP28.27■■■□□ 2.12
AC005540.1-201ENST00000413911 PARNO95453 639 aaKnown RBP28.27■■■□□ 2.12
AC005540.1-201ENST00000413911 CHMLP26374 656 aa28.27■■■□□ 2.12
AC005540.1-201ENST00000413911 FCHSD1Q86WN1 690 aa28.27■■■□□ 2.12
AC005540.1-201ENST00000413911 IL27Q8NEV9 243 aa28.27■■■□□ 2.12
AC005540.1-201ENST00000413911 GCOM1H8Y6P7 765 aaPredicted RBP28.26■■■□□ 2.11
AC005540.1-201ENST00000413911 POLR2MP0CAP2 368 aa28.26■■■□□ 2.11
AC005540.1-201ENST00000413911 KCNV1Q6PIU1 500 aa28.26■■■□□ 2.11
AC005540.1-201ENST00000413911 SAMD3Q8N6K7 520 aa28.26■■■□□ 2.11
AC005540.1-201ENST00000413911 RAPGEFL1Q9UHV5 662 aa28.26■■■□□ 2.11
AC005540.1-201ENST00000413911 ABHD14A-ACY1A0A1B0GW23 586 aa28.25■■■□□ 2.11
AC005540.1-201ENST00000413911 GJB5O95377 273 aa28.25■■■□□ 2.11
AC005540.1-201ENST00000413911 COL9A1P20849 921 aa28.25■■■□□ 2.11
AC005540.1-201ENST00000413911 CCND2P30279 289 aa28.25■■■□□ 2.11
AC005540.1-201ENST00000413911 ANTXR2P58335 489 aa28.25■■■□□ 2.11
AC005540.1-201ENST00000413911 TRDNQ13061 729 aa28.25■■■□□ 2.11
AC005540.1-201ENST00000413911 ZBED2Q9BTP6 218 aa28.25■■■□□ 2.11
AC005540.1-201ENST00000413911 U3KPZ7 1027 aaPredicted RBP28.25■■■□□ 2.11
AC005540.1-201ENST00000413911 PNMA6FA0A0J9YX94 578 aa28.24■■■□□ 2.11
AC005540.1-201ENST00000413911 E7EWF7 191 aa28.24■■■□□ 2.11
AC005540.1-201ENST00000413911 TGFB3P10600 412 aa28.24■■■□□ 2.11
AC005540.1-201ENST00000413911 MRPS9P82933 396 aaKnown RBP28.24■■■□□ 2.11
AC005540.1-201ENST00000413911 MKRN4PQ13434 485 aaPredicted RBP28.24■■■□□ 2.11
AC005540.1-201ENST00000413911 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.24■■■□□ 2.11
AC005540.1-201ENST00000413911 SERINC5Q86VE9 423 aa28.24■■■□□ 2.11
AC005540.1-201ENST00000413911 GDPD5Q8WTR4 605 aa28.24■■■□□ 2.11
AC005540.1-201ENST00000413911 TELO2Q9Y4R8 837 aa28.24■■■□□ 2.11
AC005540.1-201ENST00000413911 SEMA3FQ13275 785 aa28.23■■■□□ 2.11
AC005540.1-201ENST00000413911 FAM117BQ6P1L5 589 aa28.23■■■□□ 2.11
AC005540.1-201ENST00000413911 PIBF1Q8WXW3 757 aa28.23■■■□□ 2.11
AC005540.1-201ENST00000413911 RAD9AQ99638 391 aa28.23■■■□□ 2.11
AC005540.1-201ENST00000413911 OSBPL7Q9BZF2 842 aa28.23■■■□□ 2.11
AC005540.1-201ENST00000413911 MTUS1Q9ULD2 1270 aa28.23■■■□□ 2.11
AC005540.1-201ENST00000413911 FRMPD4Q14CM0 1322 aa28.22■■■□□ 2.11
AC005540.1-201ENST00000413911 HOXC8P31273 242 aa28.22■■■□□ 2.11
AC005540.1-201ENST00000413911 IKBKEQ14164 716 aa28.22■■■□□ 2.11
AC005540.1-201ENST00000413911 WTAPQ15007 396 aa28.22■■■□□ 2.11
AC005540.1-201ENST00000413911 AAK1Q2M2I8 961 aa28.22■■■□□ 2.11
AC005540.1-201ENST00000413911 IGDCC4Q8TDY8 1250 aa28.22■■■□□ 2.11
AC005540.1-201ENST00000413911 SUGCTQ9HAC7 445 aa28.22■■■□□ 2.11
AC005540.1-201ENST00000413911 MLXIPQ9HAP2 919 aa28.22■■■□□ 2.11
AC005540.1-201ENST00000413911 LINC01553A4QN01 128 aa28.21■■■□□ 2.11
AC005540.1-201ENST00000413911 LGR5O75473 907 aa28.21■■■□□ 2.11
AC005540.1-201ENST00000413911 THPOP40225 353 aa28.21■■■□□ 2.11
AC005540.1-201ENST00000413911 DBF4BQ8NFT6 615 aa28.21■■■□□ 2.11
AC005540.1-201ENST00000413911 COG5Q9UP83 839 aa28.21■■■□□ 2.11
AC005540.1-201ENST00000413911 H3BRB1 525 aa28.2■■■□□ 2.1
AC005540.1-201ENST00000413911 LGALS2P05162 132 aa28.2■■■□□ 2.1
AC005540.1-201ENST00000413911 SMIM10L2AP0DMW4 78 aa28.2■■■□□ 2.1
AC005540.1-201ENST00000413911 SMIM10L2BP0DMW5 78 aa28.2■■■□□ 2.1
AC005540.1-201ENST00000413911 ERVK-21P61565 698 aa28.2■■■□□ 2.1
AC005540.1-201ENST00000413911 NCOA7Q8NI08 942 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms