RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 PSEN2P49810 448 aa11.7□□□□□ -0.54
NCKIPSD-202ENST00000413374 FUT2Q10981 343 aa11.7□□□□□ -0.54
NCKIPSD-202ENST00000413374 SEMA3FQ13275 785 aa11.7□□□□□ -0.54
NCKIPSD-202ENST00000413374 PPIGQ13427 754 aaKnown RBP eCLIP11.7□□□□□ -0.542e-6■■■■□ 20.7
NCKIPSD-202ENST00000413374 TMEM240Q5SV17 173 aa11.7□□□□□ -0.54
NCKIPSD-202ENST00000413374 ERICH6BQ5W0A0 696 aa11.7□□□□□ -0.54
NCKIPSD-202ENST00000413374 TYW1BQ6NUM6 668 aa11.7□□□□□ -0.54
NCKIPSD-202ENST00000413374 KCNV1Q6PIU1 500 aa11.7□□□□□ -0.54
NCKIPSD-202ENST00000413374 CYFIP1Q7L576 1253 aa11.7□□□□□ -0.54
NCKIPSD-202ENST00000413374 PKD2L1Q9P0L9 805 aa11.7□□□□□ -0.54
NCKIPSD-202ENST00000413374 SMCO2A6NFE2 343 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 SPDYE3A6NKU9 549 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 SPATA31C2B4DYI2 1134 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 PIK3CDO00329 1044 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 TGFB3P10600 412 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 ZNF200P98182 395 aaPredicted RBP11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 MFSD10Q14728 455 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 PTGISQ16647 500 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 GNPTABQ3T906 1256 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 UTP14CQ5TAP6 766 aaKnown RBP11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 PCNX4Q63HM2 1172 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 GDF6Q6KF10 455 aaPredicted RBP11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 NFRKBQ6P4R8 1299 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 RUFY3Q7L099 469 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 OTOP2Q7RTS6 562 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 DEFB128Q7Z7B8 93 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 NLRX1Q86UT6 975 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 C7orf31Q8N865 590 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 PPTC7Q8NI37 304 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 PHKBQ93100 1093 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 SEZ6LQ9BYH1 1024 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 UPF3BQ9BZI7 483 aaKnown RBP11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 WNT8AQ9H1J5 351 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 TMEM260Q9NX78 707 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 HDAC6Q9UBN7 1215 aa11.69□□□□□ -0.54
NCKIPSD-202ENST00000413374 GRXCR1A8MXD5 290 aa11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 STXBP3O00186 592 aa11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 NOP56O00567 594 aaKnown RBP11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 FIBPO43427 364 aa11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 ATP9AO75110 1047 aa11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 FGBP02675 491 aa11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 ICAM3P32942 547 aa11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 KIAA0753Q2KHM9 967 aa11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 FAM109BQ6ICB4 259 aaPredicted RBP11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 RETREG2Q8NC44 543 aa11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 EMID1Q96A84 441 aaPredicted RBP11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 INPP4AQ96PE3 977 aaPredicted RBP11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 NCOA5Q9HCD5 579 aaKnown RBP11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 ZSWIM6Q9HCJ5 1215 aa11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 IL23AQ9NPF7 189 aa11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 LRRC37A2A6NM11 1700 aa11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 BAZ2BQ9UIF8 2168 aaKnown RBP11.68□□□□□ -0.54
NCKIPSD-202ENST00000413374 SZT2Q5T011 3432 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 FRMPD4Q14CM0 1322 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 CCDC196A0A1B0GTZ2 297 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 ADAMTS3O15072 1205 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 DTNBO60941 627 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 PPFIA4O75335 1185 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 ITGB5P18084 799 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 PDIA3P30101 505 aaKnown RBP11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 ADCY7P51828 1080 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 PTPN11Q06124 597 aaPredicted RBP11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 STK3Q13188 491 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 TOB2Q14106 344 aaPredicted RBP11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 NEDD9Q14511 834 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 HIC1Q14526 733 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 JAKMIP3Q5VZ66 844 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 UIMC1Q96RL1 719 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 SLC26A6Q9BXS9 759 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 RIC8AQ9NPQ8 531 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 MTMR10Q9NXD2 777 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 BARHL2Q9NY43 387 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 CXXC1Q9P0U4 656 aaPredicted RBP11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 CYP46A1Q9Y6A2 500 aa11.67□□□□□ -0.54
NCKIPSD-202ENST00000413374 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 ZBBXA8MT70 800 aa11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 HAS3O00219 553 aa11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 STAM2O75886 525 aa11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 IQCF3P0C7M6 154 aa11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 AKAP17AQ02040 695 aaKnown RBP11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 PFKFB3Q16875 520 aaPredicted RBP11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 GPR153Q6NV75 609 aa11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 XRRA1Q6P2D8 792 aa11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 RPUSD2Q8IZ73 545 aaKnown RBP11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 CYP2W1Q8TAV3 490 aa11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 GPR20Q99678 358 aa11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 C16orf70Q9BSU1 422 aa11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 KATNAL1Q9BW62 490 aa11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 FTOQ9C0B1 505 aaKnown RBP eCLIP11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 PDRG1Q9NUG6 133 aa11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 GTF2IRD1Q9UHL9 959 aa11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 UBIAD1Q9Y5Z9 338 aa11.66□□□□□ -0.54
NCKIPSD-202ENST00000413374 H3BRB1 525 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 PRPF3O43395 683 aaKnown RBP11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 F2P00734 622 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 LGALS2P05162 132 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 ARP10275 920 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 SCG2P13521 617 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 ZNF76P36508 570 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms