RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 SPIRE1Q08AE8 756 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 BNIP3Q12983 259 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 GPR19Q15760 415 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 DDB1Q16531 1140 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 ABCB5Q2M3G0 1257 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 PLA2G4EQ3MJ16 856 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 ARHGAP36Q6ZRI8 547 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 CHPFQ8IZ52 775 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 SLC5A5Q92911 643 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 CHMP4CQ96CF2 233 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 AHCYL2Q96HN2 611 aaKnown RBP6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 MAP6Q96JE9 813 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 HHIPL1Q96JK4 782 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 POLR3GLQ9BT43 218 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 BOCQ9BWV1 1114 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 SMURF1Q9HCE7 757 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 TNFRSF10DQ9UBN6 386 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 VAV3Q9UKW4 847 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 ARID4BQ4LE39 1312 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 FADS2P1A8MWK0 482 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 ZNF561-AS1K7EIQ3 104 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 NKRFO15226 690 aaKnown RBP eCLIP6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 USP2O75604 605 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 FBXO21O94952 628 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 MT-CO1P00395 513 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 AMY2AP04746 511 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 SLC9A1P19634 815 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 AMY2BP19961 511 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 CCND1P24385 295 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 CEBPAP49715 358 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 IRF9Q00978 393 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 PIN1Q13526 163 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 ZNF174Q15697 407 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 CREB3L3Q68CJ9 461 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 PTRH1Q86Y79 214 aaKnown RBP6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 C8orf48Q96LL4 319 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 ADAMTS10Q9H324 1103 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 SLC52A1Q9NWF4 448 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 EBF1Q9UH73 591 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 NOB1Q9ULX3 412 aaKnown RBP6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 ZNF281Q9Y2X9 895 aa6.35□□□□□ -1.39
HMGB3P31-201ENST00000413333 WASHC2AQ641Q2 1341 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 TCRBV5S4A2TA0A5A2 114 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 SCDO00767 359 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 PRC1O43663 620 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 DGKIO75912 1065 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 MAP4K4O95819 1239 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 TGFB1P01137 390 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 ITGB2P05107 769 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 TACR1P25103 407 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 GRIK1P39086 918 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 IARSP41252 1262 aaKnown RBP6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 TBX4P57082 545 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 SESN3P58005 492 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 RTP1P59025 263 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 FAPQ12884 760 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 DUSP4Q13115 394 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 BROXQ5VW32 411 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 CEP128Q6ZU80 1094 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 OTOP1Q7RTM1 612 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 OTOP3Q7RTS5 596 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 LZTR1Q8N653 840 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 EFHBQ8N7U6 833 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 CLRN3Q8NCR9 226 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 PIP4K2CQ8TBX8 421 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 G6PC3Q9BUM1 346 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 EPB41L1Q9H4G0 881 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 PCIF1Q9H4Z3 704 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 TOMM22Q9NS69 142 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 SLAMF8Q9P0V8 285 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 ADGRE2Q9UHX3 823 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 ZNF180Q9UJW8 692 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 SPEF1Q9Y4P9 236 aa6.34□□□□□ -1.39
HMGB3P31-201ENST00000413333 A0A1W2PQ45 241 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 A0A1W2PQY0 241 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 E2F8A0AVK6 867 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 TGM5O43548 720 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 HIP1RO75146 1068 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 GDF11O95390 407 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 ZBTB48P10074 688 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 YBX3P16989 372 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 KIF11P52732 1056 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 KCNMA1Q12791 1236 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 SLC14A2Q15849 920 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 RALGPS1Q5JS13 557 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 CPZQ66K79 652 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 C14orf80Q86SX3 495 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 SLCO6A1Q86UG4 719 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 CCDC146Q8IYE0 955 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 MYO1HQ8N1T3 1032 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 KIAA1958Q8N8K9 716 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 PLEKHO2Q8TD55 490 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 FUBP3Q96I24 572 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 MENTQ9BUN1 341 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 CD244Q9BZW8 370 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 C14orf119Q9NWQ9 140 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 GEMIN8Q9NWZ8 242 aaKnown RBP6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 IMPACTQ9P2X3 320 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 IP6K2Q9UHH9 426 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms