RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 GCLCP48506 637 aaPredicted RBP7.49□□□□□ -1.21
VPS41-204ENST00000413141 TYRO3Q06418 890 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 PNOCQ13519 176 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 PDIA5Q14554 519 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 POSTNQ15063 836 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 Q3C1V9 767 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 NAALADL2Q58DX5 795 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 KANK3Q6NY19 840 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 PDXDC2PQ6P474 469 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 SH3RF1Q7Z6J0 888 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 CEP57L1Q8IYX8 460 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 IQUBQ8NA54 791 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 GPRC5AQ8NFJ5 357 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 DNERQ8NFT8 737 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 RASSF8Q8NHQ8 419 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 NSUN6Q8TEA1 469 aaKnown RBP7.49□□□□□ -1.21
VPS41-204ENST00000413141 SNX29Q8TEQ0 813 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 ERCC4Q92889 916 aaPredicted RBP7.49□□□□□ -1.21
VPS41-204ENST00000413141 SLC5A5Q92911 643 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 HHIPL1Q96JK4 782 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 ZFP91Q96JP5 570 aaPredicted RBP7.49□□□□□ -1.21
VPS41-204ENST00000413141 UIMC1Q96RL1 719 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 PANK2Q9BZ23 570 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 R3HDMLQ9H3Y0 253 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 TSPY26PQ9H489 355 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 MROH8Q9H579 483 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 ZCCHC17Q9NP64 241 aaKnown RBP7.49□□□□□ -1.21
VPS41-204ENST00000413141 JADE2Q9NQC1 790 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 KIAA1468Q9P260 1216 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 CCDC39Q9UFE4 941 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 ABT1Q9ULW3 272 aaKnown RBP7.49□□□□□ -1.21
VPS41-204ENST00000413141 PCDHA12Q9UN75 941 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 KDM3AQ9Y4C1 1321 aa7.49□□□□□ -1.21
VPS41-204ENST00000413141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.48□□□□□ -1.21
VPS41-204ENST00000413141 GOLGA6L3A6NEY3 463 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 POTEB2H3BUK9 544 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 FOXN1O15353 648 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 SLC26A4O43511 780 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 PSMD10O75832 226 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 STAM2O75886 525 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 NR3C2P08235 984 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 PRR29P0C7W0 189 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 ARP10275 920 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 MYCLP12524 364 aaPredicted RBP7.48□□□□□ -1.21
VPS41-204ENST00000413141 EDNRBP24530 442 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 ALDH5A1P51649 535 aaPredicted RBP7.48□□□□□ -1.21
VPS41-204ENST00000413141 CCNA1P78396 465 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 MDM2Q00987 491 aaPredicted RBP7.48□□□□□ -1.21
VPS41-204ENST00000413141 CNTN2Q02246 1040 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 FSTL1Q12841 308 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 GRB10Q13322 594 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 PPP2R5CQ13362 524 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 MTMR1Q13613 665 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 STX1AQ16623 288 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 FAM110CQ1W6H9 321 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 TMEM119Q4V9L6 283 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 HYIQ5T013 277 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 LRCH2Q5VUJ6 765 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 RRAGBQ5VZM2 374 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 KRT79Q5XKE5 535 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 HAUS3Q68CZ6 603 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 SASS6Q6UVJ0 657 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 VSIG10LQ86VR7 867 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 GRAMD1CQ8IYS0 662 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 ANKRD13CQ8N6S4 541 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 FAM133AQ8N9E0 248 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 LRRC15Q8TF66 581 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 CALML4Q96GE6 196 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 CCDC34Q96HJ3 373 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 INPP4AQ96PE3 977 aaPredicted RBP7.48□□□□□ -1.21
VPS41-204ENST00000413141 PNMA5Q96PV4 448 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 MMP19Q99542 508 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 RIT2Q99578 217 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 ZNF577Q9BSK1 485 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 WDR11Q9BZH6 1224 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 PORCNQ9H237 461 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 CUEDC2Q9H467 287 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 MAGEF1Q9HAY2 307 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 AGO4Q9HCK5 861 aaKnown RBP7.48□□□□□ -1.21
VPS41-204ENST00000413141 KCNH7Q9NS40 1196 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 HOOK1Q9UJC3 728 aaKnown RBP7.48□□□□□ -1.21
VPS41-204ENST00000413141 TUBE1Q9UJT0 475 aa7.48□□□□□ -1.21
VPS41-204ENST00000413141 DNAJC25-GNG10A0A024R161 153 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 SOWAHBA6NEL2 793 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 IPO5O00410 1097 aaKnown RBP7.47□□□□□ -1.21
VPS41-204ENST00000413141 GAS7O60861 476 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 RGS20O76081 388 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 PGK2P07205 417 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 FCER1AP12319 257 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 SREBF2Q12772 1141 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 SEMA3FQ13275 785 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 ITGB3BPQ13352 177 aaPredicted RBP7.47□□□□□ -1.21
VPS41-204ENST00000413141 KCTD2Q14681 263 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 ZRSR1Q15695 479 aaKnown RBP7.47□□□□□ -1.21
VPS41-204ENST00000413141 NT5DC1Q5TFE4 455 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 WDR78Q5VTH9 848 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 NCAPH2Q6IBW4 605 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 B3GNT9Q6UX72 402 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 OTOP1Q7RTM1 612 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 NLRX1Q86UT6 975 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms