RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 KDM3AQ9Y4C1 1321 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 GOLGA6BA6NDN3 693 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 POTEMA6NI47 508 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 PPFIA4O75335 1185 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 ZMYND10O75800 440 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 SERPING1P05155 500 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 RFC4P35249 363 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 NNTQ13423 1086 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 SLC9C1Q4G0N8 1177 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 CACNA2D4Q7Z3S7 1137 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 COA7Q96BR5 231 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 SH3GL2Q99962 352 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 TLR10Q9BXR5 811 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 BMP2KQ9NSY1 1161 aaPredicted RBP18.45■□□□□ 0.54
LIMS2-208ENST00000410011 GGA1Q9UJY5 639 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 FOCADQ5VW36 1801 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 EPB41P11171 864 aaKnown RBP18.45■□□□□ 0.54
LIMS2-208ENST00000410011 EPHB4P54760 987 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 TRAPPC3LQ5T215 181 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 ALS2CLQ60I27 953 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 PTF1AQ7RTS3 328 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 KCNK18Q7Z418 384 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 AMIGO3Q86WK7 504 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 ZC3H3Q8IXZ2 948 aaKnown RBP18.45■□□□□ 0.54
LIMS2-208ENST00000410011 HAS1Q92839 578 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 CAVIN3Q969G5 261 aa18.45■□□□□ 0.54
LIMS2-208ENST00000410011 DMGDHQ9UI17 866 aaKnown RBP18.45■□□□□ 0.54
LIMS2-208ENST00000410011 UFL1O94874 794 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 MRPL12P52815 198 aaKnown RBP18.44■□□□□ 0.54
LIMS2-208ENST00000410011 ZNF543Q08ER8 600 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 COASYQ13057 564 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 MFSD14BQ5SR56 506 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 KLHDC7AQ5VTJ3 777 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 RASSF4Q9H2L5 321 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 STIM2Q9P246 746 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 SUGT1Q9Y2Z0 365 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 BTAF1O14981 1849 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 A6NNZ2 444 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 TUBB8Q3ZCM7 444 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 FAM26FQ5R3K3 315 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 CCDC181Q5TID7 509 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 GBP6Q6ZN66 633 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 FAM76AQ8TAV0 307 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 MTMR8Q96EF0 704 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 GLT8D2Q9H1C3 349 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 JMJD4Q9H9V9 463 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 DDX25Q9UHL0 483 aaKnown RBP18.44■□□□□ 0.54
LIMS2-208ENST00000410011 SALL4Q9UJQ4 1053 aa18.44■□□□□ 0.54
LIMS2-208ENST00000410011 GOLGA8KD6RF30 607 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 BBOX1O75936 387 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 NOL4O94818 638 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 TTLL1O95922 423 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 CFAP221Q4G0U5 840 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 SFMBT2Q5VUG0 894 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 NFRKBQ6P4R8 1299 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 TRIM59Q8IWR1 403 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 RPGRQ92834 1020 aaKnown RBP18.43■□□□□ 0.54
LIMS2-208ENST00000410011 CUL5Q93034 780 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 PANK4Q9NVE7 773 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 LCMT1Q9UIC8 334 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 PCDHA2Q9Y5H9 948 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 FRMPD2Q68DX3 1309 aaPredicted RBP18.43■□□□□ 0.54
LIMS2-208ENST00000410011 OPA1O60313 960 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 GFPT1Q06210 699 aaPredicted RBP18.43■□□□□ 0.54
LIMS2-208ENST00000410011 ECM1Q16610 540 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 FAM83BQ5T0W9 1011 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 GPATCH4Q5T3I0 446 aaKnown RBP18.43■□□□□ 0.54
LIMS2-208ENST00000410011 HAUS3Q68CZ6 603 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 HDAC7Q8WUI4 952 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 AIPL1Q9NZN9 384 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 PCDHA12Q9UN75 941 aa18.43■□□□□ 0.54
LIMS2-208ENST00000410011 GRID2IPA4D2P6 1211 aa18.42■□□□□ 0.54
LIMS2-208ENST00000410011 PPFIA1Q13136 1202 aa18.42■□□□□ 0.54
LIMS2-208ENST00000410011 NAB2Q15742 525 aa18.42■□□□□ 0.54
LIMS2-208ENST00000410011 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
LIMS2-208ENST00000410011 CCDC65Q8IXS2 484 aa18.42■□□□□ 0.54
LIMS2-208ENST00000410011 ADGRF4Q8IZF3 695 aa18.42■□□□□ 0.54
LIMS2-208ENST00000410011 GPR101Q96P66 508 aaPredicted RBP18.42■□□□□ 0.54
LIMS2-208ENST00000410011 ATF5Q9Y2D1 282 aaPredicted RBP18.42■□□□□ 0.54
LIMS2-208ENST00000410011 ATP6V0A2Q9Y487 856 aa18.42■□□□□ 0.54
LIMS2-208ENST00000410011 GOLGA6CA6NDK9 693 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 TRAF5O00463 557 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 GOLGA6DP0CG33 693 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 ADRA2BP18089 450 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 RASSF7Q02833 373 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 PRR5LQ6MZQ0 368 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 SND1Q7KZF4 910 aaKnown RBP eCLIP18.41■□□□□ 0.54
LIMS2-208ENST00000410011 SLC51AQ86UW1 340 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 RIN2Q8WYP3 895 aaPredicted RBP18.41■□□□□ 0.54
LIMS2-208ENST00000410011 GOLGA6AQ9NYA3 693 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 DAGLAQ9Y4D2 1042 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 TAF1LQ8IZX4 1826 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 FRMD3A2A2Y4 597 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 BTNL10A8MVZ5 291 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 TLR2O60603 784 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 TNNI2P48788 182 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 LRRC41Q15345 812 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 EZH2Q15910 746 aaKnown RBP18.41■□□□□ 0.54
LIMS2-208ENST00000410011 SLC18A3Q16572 532 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 EDRF1Q3B7T1 1238 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms