RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ZNF157P51786 506 aaPredicted RBP14.01□□□□□ -0.17
CHMP3-204ENST00000409727 MRPS9P82933 396 aaKnown RBP14.01□□□□□ -0.17
CHMP3-204ENST00000409727 Q3C1V9 767 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 PCNX4Q63HM2 1172 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 SAMD3Q8N6K7 520 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 SMARCE1Q969G3 411 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 FAM20AQ96MK3 541 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 MTRQ99707 1265 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 PDCD2LQ9BRP1 358 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 ZNF577Q9BSK1 485 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 ANO10Q9NW15 660 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 PNMA3Q9UL41 463 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 RABGAP1Q9Y3P9 1069 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 TESPA1A2RU30 521 aaPredicted RBP14□□□□□ -0.17
CHMP3-204ENST00000409727 DDX39AO00148 427 aaKnown RBP14□□□□□ -0.17
CHMP3-204ENST00000409727 MEIS1O00470 390 aa14□□□□□ -0.17
CHMP3-204ENST00000409727 CCT6AP40227 531 aaKnown RBP14□□□□□ -0.17
CHMP3-204ENST00000409727 CNTN2Q02246 1040 aa14□□□□□ -0.17
CHMP3-204ENST00000409727 GRB10Q13322 594 aa14□□□□□ -0.17
CHMP3-204ENST00000409727 LRCH2Q5VUJ6 765 aa14□□□□□ -0.17
CHMP3-204ENST00000409727 LUZP1Q86V48 1076 aa14□□□□□ -0.17
CHMP3-204ENST00000409727 ELOA2Q8IYF1 753 aaPredicted RBP14□□□□□ -0.17
CHMP3-204ENST00000409727 FAM43AQ8N2R8 423 aa14□□□□□ -0.17
CHMP3-204ENST00000409727 TUBE1Q9UJT0 475 aa14□□□□□ -0.17
CHMP3-204ENST00000409727 FRMPD4Q14CM0 1322 aa14□□□□□ -0.17
CHMP3-204ENST00000409727 GAS7O60861 476 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 ZBTB48P10074 688 aaPredicted RBP13.99□□□□□ -0.17
CHMP3-204ENST00000409727 ZNF165P49910 485 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 SETQ01105 290 aaPredicted RBP13.99□□□□□ -0.17
CHMP3-204ENST00000409727 SPIRE1Q08AE8 756 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 CUL4BQ13620 913 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 ECM1Q16610 540 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 SH3RF1Q7Z6J0 888 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 FAM200AQ8TCP9 573 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 NSUN6Q8TEA1 469 aaKnown RBP13.99□□□□□ -0.17
CHMP3-204ENST00000409727 PNMA5Q96PV4 448 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 CBX8Q9HC52 389 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 KCNH7Q9NS40 1196 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 MAN1B1Q9UKM7 699 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 IPO5O00410 1097 aaKnown RBP13.99□□□□□ -0.17
CHMP3-204ENST00000409727 SMC2O95347 1197 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 NR3C2P08235 984 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 NLRP12P59046 1061 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 MTMR1Q13613 665 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 ANKRD13CQ8N6S4 541 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 TRPM7Q96QT4 1865 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 PTPN18Q99952 460 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 FBXO40Q9UH90 709 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 VAV3Q9UKW4 847 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 UBIAD1Q9Y5Z9 338 aa13.99□□□□□ -0.17
CHMP3-204ENST00000409727 POTEB3A0JP26 581 aa13.98□□□□□ -0.17
CHMP3-204ENST00000409727 CCND2P30279 289 aa13.98□□□□□ -0.17
CHMP3-204ENST00000409727 ERVK-9P63128 1117 aa13.98□□□□□ -0.17
CHMP3-204ENST00000409727 ERVK-24P63145 666 aa13.98□□□□□ -0.17
CHMP3-204ENST00000409727 CYP4A11Q02928 519 aa13.98□□□□□ -0.17
CHMP3-204ENST00000409727 DPYDQ12882 1025 aa13.98□□□□□ -0.17
CHMP3-204ENST00000409727 POTEBQ6S5H4 581 aa13.98□□□□□ -0.17
CHMP3-204ENST00000409727 KCNK18Q7Z418 384 aa13.98□□□□□ -0.17
CHMP3-204ENST00000409727 SAPCD2Q86UD0 394 aa13.98□□□□□ -0.17
CHMP3-204ENST00000409727 RASAL3Q86YV0 1011 aa13.98□□□□□ -0.17
CHMP3-204ENST00000409727 SLC5A5Q92911 643 aa13.98□□□□□ -0.17
CHMP3-204ENST00000409727 KIAA1024Q9UPX6 916 aa13.98□□□□□ -0.17
CHMP3-204ENST00000409727 PFASO15067 1338 aa13.98□□□□□ -0.17
CHMP3-204ENST00000409727 EML1O00423 815 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 GTPBP6O43824 516 aaPredicted RBP13.97□□□□□ -0.17
CHMP3-204ENST00000409727 MED24O75448 989 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 PSMD10O75832 226 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 SLC25A27O95847 323 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 PGK2P07205 417 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 PLCB2Q00722 1185 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 MCM6Q14566 821 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 OTOP1Q7RTM1 612 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 ANKRD23Q86SG2 305 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 ERMNQ8TAM6 284 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 JADE2Q9NQC1 790 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 ABT1Q9ULW3 272 aaKnown RBP13.97□□□□□ -0.17
CHMP3-204ENST00000409727 PASKQ96RG2 1323 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 POTEFA5A3E0 1075 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 POTEB2H3BUK9 544 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 KIF3CO14782 793 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 BMP6P22004 513 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 SARSP49591 514 aaKnown RBP13.97□□□□□ -0.17
CHMP3-204ENST00000409727 FSTL1Q12841 308 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 GRM1Q13255 1194 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 NT5DC1Q5TFE4 455 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 HAUS3Q68CZ6 603 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 RGMBQ6NW40 437 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 POTEGQ6S5H5 508 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 VSIG10LQ86VR7 867 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 TEKT3Q9BXF9 490 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 NAT10Q9H0A0 1025 aaKnown RBP13.97□□□□□ -0.17
CHMP3-204ENST00000409727 PORCNQ9H237 461 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 UNC45AQ9H3U1 944 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 EFCC1Q9HA90 598 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 AGO4Q9HCK5 861 aaKnown RBP13.97□□□□□ -0.17
CHMP3-204ENST00000409727 BLOC1S4Q9NUP1 217 aa13.97□□□□□ -0.17
CHMP3-204ENST00000409727 ASTN1O14525 1302 aa13.96□□□□□ -0.17
CHMP3-204ENST00000409727 KDM3AQ9Y4C1 1321 aa13.96□□□□□ -0.17
CHMP3-204ENST00000409727 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.17
CHMP3-204ENST00000409727 SSBP05455 408 aaKnown RBP eCLIP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms