RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 SEPT4O43236 478 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 CCND3P30281 292 aaPredicted RBP18.87■□□□□ 0.61
SUMO1-208ENST00000409627 ADCYAP1R1P41586 468 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 TOB1P50616 345 aaPredicted RBP18.87■□□□□ 0.61
SUMO1-208ENST00000409627 NUCB2P80303 420 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 SEMA3FQ13275 785 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 TTLL4Q14679 1199 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 PRR16Q569H4 304 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 TTC38Q5R3I4 469 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 CCDC62Q6P9F0 684 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 ZNF333Q96JL9 665 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 DOCK5Q9H7D0 1870 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 HMX1Q9NP08 348 aaPredicted RBP18.87■□□□□ 0.61
SUMO1-208ENST00000409627 DDX25Q9UHL0 483 aaKnown RBP18.87■□□□□ 0.61
SUMO1-208ENST00000409627 ZDHHC9Q9Y397 364 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 MRVI1Q9Y6F6 885 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 HTTP42858 3142 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 DUSP28Q4G0W2 176 aa18.86■□□□□ 0.61
SUMO1-208ENST00000409627 KCNH7Q9NS40 1196 aa18.86■□□□□ 0.61
SUMO1-208ENST00000409627 DDX41Q9UJV9 622 aaKnown RBP18.86■□□□□ 0.61
SUMO1-208ENST00000409627 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.85■□□□□ 0.61
SUMO1-208ENST00000409627 NKRFO15226 690 aaKnown RBP eCLIP18.85■□□□□ 0.61
SUMO1-208ENST00000409627 SLC37A4O43826 429 aa18.85■□□□□ 0.61
SUMO1-208ENST00000409627 MSCO60682 206 aa18.85■□□□□ 0.61
SUMO1-208ENST00000409627 ARIH2O95376 493 aa18.85■□□□□ 0.61
SUMO1-208ENST00000409627 ARP10275 920 aa18.85■□□□□ 0.61
SUMO1-208ENST00000409627 TXNP10599 105 aaKnown RBP18.85■□□□□ 0.61
SUMO1-208ENST00000409627 ATP2B1P20020 1258 aa18.85■□□□□ 0.61
SUMO1-208ENST00000409627 CNGA1P29973 690 aa18.85■□□□□ 0.61
SUMO1-208ENST00000409627 TNFAIP2Q03169 654 aa18.85■□□□□ 0.61
SUMO1-208ENST00000409627 FOXD4L5Q5VV16 416 aaPredicted RBP18.85■□□□□ 0.61
SUMO1-208ENST00000409627 FOXD4L4Q8WXT5 416 aaPredicted RBP18.85■□□□□ 0.61
SUMO1-208ENST00000409627 SENP7Q9BQF6 1050 aa18.85■□□□□ 0.61
SUMO1-208ENST00000409627 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.85■□□□□ 0.611e-6■■□□□ 11.5
SUMO1-208ENST00000409627 AGO4Q9HCK5 861 aaKnown RBP18.85■□□□□ 0.61
SUMO1-208ENST00000409627 ADCY6O43306 1168 aa18.84■□□□□ 0.61
SUMO1-208ENST00000409627 KCNA2P16389 499 aa18.84■□□□□ 0.61
SUMO1-208ENST00000409627 SMPD1P17405 629 aa18.84■□□□□ 0.61
SUMO1-208ENST00000409627 UBA1P22314 1058 aaKnown RBP18.84■□□□□ 0.61
SUMO1-208ENST00000409627 MCM7P33993 719 aa18.84■□□□□ 0.61
SUMO1-208ENST00000409627 NBR1Q14596 966 aa18.84■□□□□ 0.61
SUMO1-208ENST00000409627 UNC93B1Q9H1C4 597 aa18.84■□□□□ 0.61
SUMO1-208ENST00000409627 PAK6Q9NQU5 681 aaPredicted RBP18.84■□□□□ 0.61
SUMO1-208ENST00000409627 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.84■□□□□ 0.61
SUMO1-208ENST00000409627 DDX20Q9UHI6 824 aaKnown RBP18.84■□□□□ 0.61
SUMO1-208ENST00000409627 GNEQ9Y223 722 aaKnown RBP18.84■□□□□ 0.61
SUMO1-208ENST00000409627 PCDHB6Q9Y5E3 794 aa18.84■□□□□ 0.61
SUMO1-208ENST00000409627 TBX3O15119 743 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 MSH4O15457 936 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 NEMFO60524 1076 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 DUSP11O75319 330 aaKnown RBP18.83■□□□□ 0.6
SUMO1-208ENST00000409627 CCL5P13501 91 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 SP2Q02086 613 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 NEDD9Q14511 834 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 MTFR1Q15390 333 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 ZNF174Q15697 407 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 LY6KQ17RY6 165 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 POTEDQ86YR6 584 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 GIMAP8Q8ND71 665 aaPredicted RBP18.83■□□□□ 0.6
SUMO1-208ENST00000409627 ETNPPLQ8TBG4 499 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 ZNF577Q9BSK1 485 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 KCNMB3Q9NPA1 279 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 Q9Y3F1 56 aa18.83■□□□□ 0.6
SUMO1-208ENST00000409627 NFASCO94856 1347 aa18.82■□□□□ 0.6
SUMO1-208ENST00000409627 IPO5O00410 1097 aaKnown RBP18.82■□□□□ 0.6
SUMO1-208ENST00000409627 ATP9AO75110 1047 aa18.82■□□□□ 0.6
SUMO1-208ENST00000409627 RARBP10826 455 aa18.82■□□□□ 0.6
SUMO1-208ENST00000409627 TMEM63BQ5T3F8 832 aa18.82■□□□□ 0.6
SUMO1-208ENST00000409627 FAM173BQ6P4H8 233 aa18.82■□□□□ 0.6
SUMO1-208ENST00000409627 SLC5A5Q92911 643 aa18.82■□□□□ 0.6
SUMO1-208ENST00000409627 EMID1Q96A84 441 aaPredicted RBP18.82■□□□□ 0.6
SUMO1-208ENST00000409627 FAM20AQ96MK3 541 aa18.82■□□□□ 0.6
SUMO1-208ENST00000409627 CHMP5Q9NZZ3 219 aa18.82■□□□□ 0.6
SUMO1-208ENST00000409627 ATP6V1DQ9Y5K8 247 aa18.82■□□□□ 0.6
SUMO1-208ENST00000409627 GGPS1O95749 300 aa18.81■□□□□ 0.6
SUMO1-208ENST00000409627 BMP15O95972 392 aa18.81■□□□□ 0.6
SUMO1-208ENST00000409627 GH1P01241 217 aa18.81■□□□□ 0.6
SUMO1-208ENST00000409627 ARHGAP1Q07960 439 aa18.81■□□□□ 0.6
SUMO1-208ENST00000409627 ITGB3BPQ13352 177 aaPredicted RBP18.81■□□□□ 0.6
SUMO1-208ENST00000409627 CALCRLQ16602 461 aa18.81■□□□□ 0.6
SUMO1-208ENST00000409627 CELF3Q5SZQ8 465 aaKnown RBP18.81■□□□□ 0.6
SUMO1-208ENST00000409627 TLK2Q86UE8 772 aa18.81■□□□□ 0.6
SUMO1-208ENST00000409627 COPS5Q92905 334 aa18.81■□□□□ 0.6
SUMO1-208ENST00000409627 LENG1Q96BZ8 264 aaPredicted RBP18.81■□□□□ 0.6
SUMO1-208ENST00000409627 ZNF396Q96N95 335 aaPredicted RBP18.81■□□□□ 0.6
SUMO1-208ENST00000409627 MTMR9Q96QG7 549 aa18.81■□□□□ 0.6
SUMO1-208ENST00000409627 RIT2Q99578 217 aa18.81■□□□□ 0.6
SUMO1-208ENST00000409627 SDF4Q9BRK5 362 aa18.81■□□□□ 0.6
SUMO1-208ENST00000409627 RNF208Q9H0X6 261 aa18.81■□□□□ 0.6
SUMO1-208ENST00000409627 TBC1D22BQ9NU19 505 aa18.81■□□□□ 0.6
SUMO1-208ENST00000409627 PKD2L1Q9P0L9 805 aa18.81■□□□□ 0.6
SUMO1-208ENST00000409627 LAD1O00515 517 aa18.8■□□□□ 0.6
SUMO1-208ENST00000409627 FARP2O94887 1054 aaPredicted RBP18.8■□□□□ 0.6
SUMO1-208ENST00000409627 BAG4O95429 457 aaKnown RBP18.8■□□□□ 0.6
SUMO1-208ENST00000409627 NKX3-2P78367 333 aa18.8■□□□□ 0.6
SUMO1-208ENST00000409627 LAMC2Q13753 1193 aa18.8■□□□□ 0.6
SUMO1-208ENST00000409627 GJC2Q5T442 439 aaPredicted RBP18.8■□□□□ 0.6
SUMO1-208ENST00000409627 COL13A1Q5TAT6 717 aaPredicted RBP18.8■□□□□ 0.6
SUMO1-208ENST00000409627 LHX8Q68G74 356 aa18.8■□□□□ 0.6
SUMO1-208ENST00000409627 ATL3Q6DD88 541 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms