RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 PHACTR2O75167 634 aa18.37■□□□□ 0.53
COL23A1-202ENST00000407622 MYBL2P10244 700 aa18.37■□□□□ 0.53
COL23A1-202ENST00000407622 LMAN1P49257 510 aa18.37■□□□□ 0.53
COL23A1-202ENST00000407622 CACNB1Q02641 598 aaPredicted RBP18.37■□□□□ 0.53
COL23A1-202ENST00000407622 LRRC63Q05C16 580 aa18.37■□□□□ 0.53
COL23A1-202ENST00000407622 SPA17Q15506 151 aa18.37■□□□□ 0.53
COL23A1-202ENST00000407622 CAGE1Q8TC20 777 aa18.37■□□□□ 0.53
COL23A1-202ENST00000407622 CRAMP1Q96RY5 1269 aa18.37■□□□□ 0.53
COL23A1-202ENST00000407622 SH2D4AQ9H788 454 aa18.37■□□□□ 0.53
COL23A1-202ENST00000407622 ANO9A1A5B4 782 aa18.36■□□□□ 0.53
COL23A1-202ENST00000407622 PPEF1O14829 653 aaPredicted RBP18.36■□□□□ 0.53
COL23A1-202ENST00000407622 BAG6P46379 1132 aa18.36■□□□□ 0.53
COL23A1-202ENST00000407622 KCNMA1Q12791 1236 aa18.36■□□□□ 0.53
COL23A1-202ENST00000407622 NFIAQ12857 509 aa18.36■□□□□ 0.53
COL23A1-202ENST00000407622 DOK7Q18PE1 504 aa18.36■□□□□ 0.53
COL23A1-202ENST00000407622 ZFPM1Q8IX07 1006 aa18.36■□□□□ 0.53
COL23A1-202ENST00000407622 MSL3Q8N5Y2 521 aaKnown RBP18.36■□□□□ 0.53
COL23A1-202ENST00000407622 SALL4Q9UJQ4 1053 aa18.36■□□□□ 0.53
COL23A1-202ENST00000407622 NPHP3-ACAD11A0A0J9YXS1 232 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 USP17L15C9J2P7 530 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 USP17L13C9JLJ4 530 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 USP17L11C9JVI0 530 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 USP17L18D6R9N7 530 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 USP17L22D6RA61 530 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 USP17L17D6RBQ6 530 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 USP17L19D6RCP7 530 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 USP17L20D6RJB6 530 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 E9PMD0 336 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 EIF3JO75822 258 aaKnown RBP18.35■□□□□ 0.53
COL23A1-202ENST00000407622 SSBP05455 408 aaKnown RBP eCLIP18.35■□□□□ 0.53
COL23A1-202ENST00000407622 USP17L24Q0WX57 530 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 ZCWPW2Q504Y3 356 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 TAF3Q5VWG9 929 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 USP17L6PQ6QN14 398 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 TXLNBQ8N3L3 684 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 COG1Q8WTW3 980 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 CUL5Q93034 780 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 CCDC102AQ96A19 550 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 EXOC4Q96A65 974 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 KANSL2Q9H9L4 492 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 NRXN2Q9P2S2 1712 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 FAM196BA6NMK8 535 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 APBA1Q02410 837 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 PPP1R18Q6NYC8 613 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 CDC42EP5Q6NZY7 148 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 ANKRD13CQ8N6S4 541 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 SMARCAL1Q9NZC9 954 aa18.35■□□□□ 0.53
COL23A1-202ENST00000407622 ZBTB5O15062 677 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 CKAP4Q07065 602 aaKnown RBP18.34■□□□□ 0.53
COL23A1-202ENST00000407622 RAD51AP2Q09MP3 1159 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 GPS2Q13227 327 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 CREG2Q8IUH2 290 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 MYOCDQ8IZQ8 938 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 PSMB7Q99436 277 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 TANGO6Q9C0B7 1094 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 DEF6Q9H4E7 631 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 PSTPIP2Q9H939 334 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 CALCOCO1Q9P1Z2 691 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 SNX12Q9UMY4 172 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 PCDHAC2Q9Y5I4 1007 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 GREB1LQ9C091 1923 aaPredicted RBP18.34■□□□□ 0.53
COL23A1-202ENST00000407622 RAD21O60216 631 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 AKR1B10O60218 316 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 LCA5LO95447 670 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 TUBBP07437 444 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 MRPS25P82663 173 aaKnown RBP18.34■□□□□ 0.53
COL23A1-202ENST00000407622 GFPT1Q06210 699 aaPredicted RBP18.34■□□□□ 0.53
COL23A1-202ENST00000407622 PDXDC1Q6P996 788 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 NELFCDQ8IXH7 590 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 TSGA10Q9BZW7 698 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 COA1Q9GZY4 146 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 DNAJC18Q9H819 358 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 PANK4Q9NVE7 773 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 EHD2Q9NZN4 543 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 PCDHA12Q9UN75 941 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 ATF5Q9Y2D1 282 aaPredicted RBP18.34■□□□□ 0.53
COL23A1-202ENST00000407622 ABCB11O95342 1321 aa18.34■□□□□ 0.53
COL23A1-202ENST00000407622 QSER1Q2KHR3 1735 aa18.33■□□□□ 0.53
COL23A1-202ENST00000407622 POTEB3A0JP26 581 aa18.33■□□□□ 0.53
COL23A1-202ENST00000407622 POTECB2RU33 542 aa18.33■□□□□ 0.53
COL23A1-202ENST00000407622 MARCH6O60337 910 aa18.33■□□□□ 0.53
COL23A1-202ENST00000407622 TNNT3P45378 269 aaPredicted RBP18.33■□□□□ 0.53
COL23A1-202ENST00000407622 CACNB3P54284 484 aa18.33■□□□□ 0.53
COL23A1-202ENST00000407622 NFRKBQ6P4R8 1299 aa18.33■□□□□ 0.53
COL23A1-202ENST00000407622 POTEBQ6S5H4 581 aa18.33■□□□□ 0.53
COL23A1-202ENST00000407622 CCDC84Q86UT8 332 aaPredicted RBP18.33■□□□□ 0.53
COL23A1-202ENST00000407622 SP8Q8IXZ3 490 aa18.33■□□□□ 0.53
COL23A1-202ENST00000407622 MTMR8Q96EF0 704 aa18.33■□□□□ 0.53
COL23A1-202ENST00000407622 NLRC4Q9NPP4 1024 aa18.33■□□□□ 0.53
COL23A1-202ENST00000407622 KIAA1024Q9UPX6 916 aa18.33■□□□□ 0.53
COL23A1-202ENST00000407622 TRAF5O00463 557 aa18.33■□□□□ 0.52
COL23A1-202ENST00000407622 NCK2O43639 380 aa18.33■□□□□ 0.52
COL23A1-202ENST00000407622 FGFR1OPO95684 399 aaKnown RBP18.33■□□□□ 0.52
COL23A1-202ENST00000407622 CXCR5P32302 372 aa18.33■□□□□ 0.52
COL23A1-202ENST00000407622 STAT3P40763 770 aa18.33■□□□□ 0.52
COL23A1-202ENST00000407622 PSMD2Q13200 908 aa18.33■□□□□ 0.52
COL23A1-202ENST00000407622 ASTE1Q2TB18 679 aaPredicted RBP18.33■□□□□ 0.52
COL23A1-202ENST00000407622 FAM26FQ5R3K3 315 aa18.33■□□□□ 0.52
COL23A1-202ENST00000407622 HGSNATQ68CP4 663 aa18.33■□□□□ 0.52
COL23A1-202ENST00000407622 APOBEC3HQ6NTF7 200 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms