RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TSGA10IPQ3SY00 556 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 GDF6Q6KF10 455 aaPredicted RBP22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 TMTC3Q6ZXV5 915 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 TET1Q8NFU7 2136 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 SMARCC2Q8TAQ2 1214 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 SPATA33Q96N06 139 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 NOD1Q9Y239 953 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 TANC1Q9C0D5 1861 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 TGFB3P10600 412 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 APOA5Q6Q788 366 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 DHX32Q7L7V1 743 aaKnown RBP22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 DEFB128Q7Z7B8 93 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 SESTD1Q86VW0 696 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 RPUSD2Q8IZ73 545 aaKnown RBP22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 PBX4Q9BYU1 374 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 RTEL1Q9NZ71 1219 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 BRPF3Q9ULD4 1205 aa22.24■■□□□ 1.15
SMARCB1-204ENST00000407422 PIK3CDO00329 1044 aa22.23■■□□□ 1.15
SMARCB1-204ENST00000407422 F2P00734 622 aa22.23■■□□□ 1.15
SMARCB1-204ENST00000407422 HOXD8P13378 290 aaPredicted RBP22.23■■□□□ 1.15
SMARCB1-204ENST00000407422 PSEN2P49810 448 aa22.23■■□□□ 1.15
SMARCB1-204ENST00000407422 MYLIPQ8WY64 445 aa22.23■■□□□ 1.15
SMARCB1-204ENST00000407422 CUL5Q93034 780 aa22.23■■□□□ 1.15
SMARCB1-204ENST00000407422 ALG1Q9BT22 464 aa22.23■■□□□ 1.15
SMARCB1-204ENST00000407422 HDAC6Q9UBN7 1215 aa22.23■■□□□ 1.15
SMARCB1-204ENST00000407422 VCANP13611 3396 aa22.23■■□□□ 1.15
SMARCB1-204ENST00000407422 PITPNM1O00562 1244 aa22.22■■□□□ 1.15
SMARCB1-204ENST00000407422 PPFIA4O75335 1185 aa22.22■■□□□ 1.15
SMARCB1-204ENST00000407422 SEMA3FQ13275 785 aa22.22■■□□□ 1.15
SMARCB1-204ENST00000407422 KIAA0753Q2KHM9 967 aa22.22■■□□□ 1.15
SMARCB1-204ENST00000407422 TIFAQ96CG3 184 aa22.22■■□□□ 1.15
SMARCB1-204ENST00000407422 INPP4AQ96PE3 977 aaPredicted RBP22.22■■□□□ 1.15
SMARCB1-204ENST00000407422 TMEM265A0A087WTH1 108 aa22.21■■□□□ 1.15
SMARCB1-204ENST00000407422 HAS3O00219 553 aa22.21■■□□□ 1.15
SMARCB1-204ENST00000407422 IQCF3P0C7M6 154 aa22.21■■□□□ 1.15
SMARCB1-204ENST00000407422 MFSD10Q14728 455 aa22.21■■□□□ 1.15
SMARCB1-204ENST00000407422 SYNE3Q6ZMZ3 975 aa22.21■■□□□ 1.15
SMARCB1-204ENST00000407422 C7orf31Q8N865 590 aa22.21■■□□□ 1.15
SMARCB1-204ENST00000407422 PSTPIP2Q9H939 334 aa22.21■■□□□ 1.15
SMARCB1-204ENST00000407422 MLXIPQ9HAP2 919 aa22.21■■□□□ 1.15
SMARCB1-204ENST00000407422 GTF2IRD1Q9UHL9 959 aa22.21■■□□□ 1.15
SMARCB1-204ENST00000407422 SPATA31C2B4DYI2 1134 aa22.2■■□□□ 1.15
SMARCB1-204ENST00000407422 CPA1P15085 419 aa22.2■■□□□ 1.15
SMARCB1-204ENST00000407422 GRIN2CQ14957 1233 aa22.2■■□□□ 1.15
SMARCB1-204ENST00000407422 GNPTABQ3T906 1256 aa22.2■■□□□ 1.15
SMARCB1-204ENST00000407422 RETREG2Q8NC44 543 aa22.2■■□□□ 1.15
SMARCB1-204ENST00000407422 KATNAL1Q9BW62 490 aa22.2■■□□□ 1.15
SMARCB1-204ENST00000407422 MTIF3Q9H2K0 278 aaKnown RBP22.2■■□□□ 1.15
SMARCB1-204ENST00000407422 ZNF576Q9H609 170 aa22.2■■□□□ 1.15
SMARCB1-204ENST00000407422 STAM2O75886 525 aa22.2■■□□□ 1.14
SMARCB1-204ENST00000407422 ICAM3P32942 547 aa22.2■■□□□ 1.14
SMARCB1-204ENST00000407422 BFSP2Q13515 415 aa22.2■■□□□ 1.14
SMARCB1-204ENST00000407422 KRT32Q14532 448 aa22.2■■□□□ 1.14
SMARCB1-204ENST00000407422 UBE2SQ16763 222 aa22.2■■□□□ 1.14
SMARCB1-204ENST00000407422 PCNX4Q63HM2 1172 aa22.2■■□□□ 1.14
SMARCB1-204ENST00000407422 HEATR3Q7Z4Q2 680 aa22.2■■□□□ 1.14
SMARCB1-204ENST00000407422 DHX38Q92620 1227 aaKnown RBP22.2■■□□□ 1.14
SMARCB1-204ENST00000407422 CNTNAP5Q8WYK1 1306 aa22.19■■□□□ 1.14
SMARCB1-204ENST00000407422 ZBBXA8MT70 800 aa22.19■■□□□ 1.14
SMARCB1-204ENST00000407422 RBAK-RBAKDNI3L0D1 243 aa22.19■■□□□ 1.14
SMARCB1-204ENST00000407422 ZBTB43O43298 467 aa22.19■■□□□ 1.14
SMARCB1-204ENST00000407422 ZNF200P98182 395 aaPredicted RBP22.19■■□□□ 1.14
SMARCB1-204ENST00000407422 HIC1Q14526 733 aa22.19■■□□□ 1.14
SMARCB1-204ENST00000407422 CYFIP1Q7L576 1253 aa22.19■■□□□ 1.14
SMARCB1-204ENST00000407422 C16orf70Q9BSU1 422 aa22.19■■□□□ 1.14
SMARCB1-204ENST00000407422 TELO2Q9Y4R8 837 aa22.19■■□□□ 1.14
SMARCB1-204ENST00000407422 FIBPO43427 364 aa22.18■■□□□ 1.14
SMARCB1-204ENST00000407422 PFKMP08237 780 aa22.18■■□□□ 1.14
SMARCB1-204ENST00000407422 FUT2Q10981 343 aa22.18■■□□□ 1.14
SMARCB1-204ENST00000407422 RTN1Q16799 776 aa22.18■■□□□ 1.14
SMARCB1-204ENST00000407422 KCNB2Q92953 911 aa22.18■■□□□ 1.14
SMARCB1-204ENST00000407422 RBM28Q9NW13 759 aaKnown RBP22.18■■□□□ 1.14
SMARCB1-204ENST00000407422 SLC4A7Q9Y6M7 1214 aa22.18■■□□□ 1.14
SMARCB1-204ENST00000407422 KLF18A0A0U1RQI7 1052 aa22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 RFC2P35250 354 aa22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 RABGGTBP53611 331 aa22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 WWC2Q6AWC2 1192 aa22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 CAGE1Q8TC20 777 aa22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 FAM217BQ9NTX9 383 aaPredicted RBP22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 HSPA4P34932 840 aa22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 NEDD9Q14511 834 aa22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 GPNMBQ14956 572 aa22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 TYW1BQ6NUM6 668 aa22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 XRRA1Q6P2D8 792 aa22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 METTL7BQ6UX53 244 aa22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 WNT8BQ93098 351 aa22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 YBX2Q9Y2T7 364 aaKnown RBP22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 SNX14Q9Y5W7 946 aa22.17■■□□□ 1.14
SMARCB1-204ENST00000407422 NOP56O00567 594 aaKnown RBP22.16■■□□□ 1.14
SMARCB1-204ENST00000407422 LGALS2P05162 132 aa22.16■■□□□ 1.14
SMARCB1-204ENST00000407422 HMGB1P09429 215 aaKnown RBP22.16■■□□□ 1.14
SMARCB1-204ENST00000407422 FOSL2P15408 326 aa22.16■■□□□ 1.14
SMARCB1-204ENST00000407422 CDC27P30260 824 aa22.16■■□□□ 1.14
SMARCB1-204ENST00000407422 CCDC155Q8N6L0 562 aa22.16■■□□□ 1.14
SMARCB1-204ENST00000407422 MAFAQ8NHW3 353 aaPredicted RBP22.16■■□□□ 1.14
SMARCB1-204ENST00000407422 AFAP1L1Q8TED9 768 aa22.16■■□□□ 1.14
SMARCB1-204ENST00000407422 JAKMIP1Q96N16 626 aaKnown RBP22.16■■□□□ 1.14
SMARCB1-204ENST00000407422 GPR20Q99678 358 aa22.16■■□□□ 1.14
SMARCB1-204ENST00000407422 FTOQ9C0B1 505 aaKnown RBP eCLIP22.16■■□□□ 1.14
SMARCB1-204ENST00000407422 MSRAQ9UJ68 235 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms