RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 NOSTRINQ8IVI9 506 aa9.53□□□□□ -0.88
GPC3-203ENST00000406757 REXO1Q8N1G1 1221 aaKnown RBP9.53□□□□□ -0.88
GPC3-203ENST00000406757 ANKRD35Q8N283 1001 aa9.53□□□□□ -0.88
GPC3-203ENST00000406757 DAGLBQ8NCG7 672 aa9.53□□□□□ -0.88
GPC3-203ENST00000406757 FOXP1Q9H334 677 aaPredicted RBP9.53□□□□□ -0.88
GPC3-203ENST00000406757 A1CFQ9NQ94 594 aaKnown RBP9.53□□□□□ -0.88
GPC3-203ENST00000406757 A0A0G2JMZ2 1700 aa9.53□□□□□ -0.88
GPC3-203ENST00000406757 EYSQ5T1H1 3165 aa9.53□□□□□ -0.88
GPC3-203ENST00000406757 EDIL3O43854 480 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 SLC25A27O95847 323 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 NCLP19338 710 aaKnown RBP9.52□□□□□ -0.89
GPC3-203ENST00000406757 PTPREP23469 700 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 CNGA1P29973 690 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 TOB1P50616 345 aaPredicted RBP9.52□□□□□ -0.89
GPC3-203ENST00000406757 HSD17B4P51659 736 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 CCNA1P78396 465 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 TRAF1Q13077 416 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 ZNF174Q15697 407 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 TKFCQ3LXA3 575 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 MFSD14CQ5VZR4 134 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 GALNT17Q6IS24 598 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 GPR153Q6NV75 609 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 MCF2L2Q86YR7 1114 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 CHST13Q8NET6 341 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 BICD2Q8TD16 824 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 SYTL5Q8TDW5 730 aaPredicted RBP9.52□□□□□ -0.89
GPC3-203ENST00000406757 TBCKQ8TEA7 893 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 BBXQ8WY36 941 aaPredicted RBP9.52□□□□□ -0.89
GPC3-203ENST00000406757 MMP19Q99542 508 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 ANO3Q9BYT9 981 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 SENP6Q9GZR1 1112 aaPredicted RBP9.52□□□□□ -0.89
GPC3-203ENST00000406757 GDPD2Q9HCC8 539 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 CYP39A1Q9NYL5 469 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 CNPY2Q9Y2B0 182 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 CLIC4Q9Y696 253 aa9.52□□□□□ -0.89
GPC3-203ENST00000406757 SLC15A5A6NIM6 579 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 SPDYE3A6NKU9 549 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 MYCLP12524 364 aaPredicted RBP9.51□□□□□ -0.89
GPC3-203ENST00000406757 EIF2AK2P19525 551 aaKnown RBP9.51□□□□□ -0.89
GPC3-203ENST00000406757 CYP2C19P33261 490 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 GRB14Q14449 540 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 NONOQ15233 471 aaKnown RBP eCLIP9.51□□□□□ -0.89
GPC3-203ENST00000406757 LETM2Q2VYF4 491 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 MYSM1Q5VVJ2 828 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 KRT25Q7Z3Z0 450 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 IL31RAQ8NI17 732 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 NPLOC4Q8TAT6 608 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 USP28Q96RU2 1077 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 ZSCAN16Q9H4T2 348 aaPredicted RBP9.51□□□□□ -0.89
GPC3-203ENST00000406757 MROH8Q9H579 483 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 MTMR10Q9NXD2 777 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 RTEL1Q9NZ71 1219 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 DDX20Q9UHI6 824 aaKnown RBP9.51□□□□□ -0.89
GPC3-203ENST00000406757 STXBP5LQ9Y2K9 1186 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 PCDHB6Q9Y5E3 794 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 MRVI1Q9Y6F6 885 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 IVNS1ABPQ9Y6Y0 642 aa9.51□□□□□ -0.89
GPC3-203ENST00000406757 SOWAHBA6NEL2 793 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 PIK3CDO00329 1044 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 COBLO75128 1261 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 BAG4O95429 457 aaKnown RBP9.5□□□□□ -0.89
GPC3-203ENST00000406757 TDP2O95551 362 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 FCER1AP12319 257 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 MCM7P33993 719 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 KCTD2Q14681 263 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 TTC38Q5R3I4 469 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 ARHGEF16Q5VV41 709 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 BRAPQ7Z569 592 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 ZNF710Q8N1W2 664 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 RGS22Q8NE09 1264 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 SHCBP1Q8NEM2 672 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 TRPV1Q8NER1 839 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 GLT8D2Q9H1C3 349 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 FBXO40Q9UH90 709 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 PNMA2Q9UL42 364 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 ASTN1O14525 1302 aa9.5□□□□□ -0.89
GPC3-203ENST00000406757 DNM1LO00429 736 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 STK25O00506 426 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 FIBPO43427 364 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 CCNT1O60563 726 aaKnown RBP9.49□□□□□ -0.89
GPC3-203ENST00000406757 HOXC6P09630 235 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 PDIA4P13667 645 aaKnown RBP9.49□□□□□ -0.89
GPC3-203ENST00000406757 ADORA2AP29274 412 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 ARHGAP4P98171 946 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 SF3A1Q15459 793 aaKnown RBP9.49□□□□□ -0.89
GPC3-203ENST00000406757 GJC2Q5T442 439 aaPredicted RBP9.49□□□□□ -0.89
GPC3-203ENST00000406757 ANO1Q5XXA6 986 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 DPP9Q86TI2 863 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 FAM177A1Q8N128 213 aaPredicted RBP9.49□□□□□ -0.89
GPC3-203ENST00000406757 CYP2W1Q8TAV3 490 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 GJA10Q969M2 543 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 ZNF396Q96N95 335 aaPredicted RBP9.49□□□□□ -0.89
GPC3-203ENST00000406757 RMDN3Q96TC7 470 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 LBHD1Q9BQE6 289 aaPredicted RBP9.49□□□□□ -0.89
GPC3-203ENST00000406757 PXMP2Q9NR77 195 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 NOL7Q9UMY1 257 aaKnown RBP9.49□□□□□ -0.89
GPC3-203ENST00000406757 VCANP13611 3396 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 CDH23Q9H251 3354 aa9.49□□□□□ -0.89
GPC3-203ENST00000406757 FRMPD3Q5JV73 1810 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 SLC37A4O43826 429 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms