RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CYTH3O43739 400 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 ARID5AQ03989 594 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 LRRC41Q15345 812 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 WHAMMQ8TF30 809 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 CYFIP2Q96F07 1278 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 AK8Q96MA6 479 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 MMTAG2Q9BU76 263 aaKnown RBP15.41■□□□□ 0.06
APOB-202ENST00000399256 GOLGA6L10A6NI86 522 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 GOLGA8HP0CJ92 632 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 RDXP35241 583 aaKnown RBP15.41■□□□□ 0.06
APOB-202ENST00000399256 IL6STP40189 918 aaPredicted RBP15.41■□□□□ 0.06
APOB-202ENST00000399256 MECOMQ03112 1051 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 GLIS3Q8NEA6 775 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 CRNKL1Q9BZJ0 848 aaKnown RBP15.41■□□□□ 0.06
APOB-202ENST00000399256 IL17RBQ9NRM6 502 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 RNF14Q9UBS8 474 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 MAD2L2Q9UI95 211 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 A0A1B0GUL6 1792 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 MYMKA6NI61 221 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 BACH1O14867 736 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 ONECUT3O60422 494 aaPredicted RBP15.4■□□□□ 0.06
APOB-202ENST00000399256 CCDC172P0C7W6 258 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 KCNMA1Q12791 1236 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 CDC37Q16543 378 aaPredicted RBP15.4■□□□□ 0.06
APOB-202ENST00000399256 PTPROQ16827 1216 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 EMC10Q5UCC4 262 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.4■□□□□ 0.06
APOB-202ENST00000399256 PACSIN1Q9BY11 444 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 TMBIM4Q9HC24 238 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 SLC40A1Q9NP59 571 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 BCCIPQ9P287 314 aaKnown RBP eCLIP15.4■□□□□ 0.06
APOB-202ENST00000399256 MYH1P12882 1939 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 SSU72P8A0A1W2PR75 194 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 KCNQ2O43526 872 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 TLR2O60603 784 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 USP17L8P0C7I0 530 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 SLC9C1Q4G0N8 1177 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 SV2BQ7L1I2 683 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 CASZ1Q86V15 1759 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 NSUN4Q96CB9 384 aaKnown RBP15.4■□□□□ 0.06
APOB-202ENST00000399256 CALML4Q96GE6 196 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 INPP4AQ96PE3 977 aaPredicted RBP15.4■□□□□ 0.06
APOB-202ENST00000399256 BARHL2Q9NY43 387 aa15.4■□□□□ 0.06
APOB-202ENST00000399256 CHUKO15111 745 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 SSBP05455 408 aaKnown RBP eCLIP15.39■□□□□ 0.05
APOB-202ENST00000399256 CAVIN4Q5BKX8 364 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 SFMBT2Q5VUG0 894 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 DDX42Q86XP3 938 aaKnown RBP eCLIP15.39■□□□□ 0.05
APOB-202ENST00000399256 DAGLBQ8NCG7 672 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 TBC1D5Q92609 795 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 MCM9Q9NXL9 1143 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 JAG2Q9Y219 1238 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 USP17L3A6NCW0 530 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 USP17L4A6NCW7 530 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 TMOD1P28289 359 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 HSD17B3P37058 310 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 HSPA9P38646 679 aaKnown RBP15.39■□□□□ 0.05
APOB-202ENST00000399256 TXKP42681 527 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 SMTNP53814 917 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 GRM4Q14833 912 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 NAB2Q15742 525 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 SPRED3Q2MJR0 410 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 MEI1Q5TIA1 1274 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 TMED8Q6PL24 325 aaPredicted RBP15.39■□□□□ 0.05
APOB-202ENST00000399256 CCDC121Q6ZUS5 278 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 USP17L1Q7RTZ2 530 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 DYNLL2Q96FJ2 89 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 CCDC114Q96M63 670 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 QTRT2Q9H974 415 aaKnown RBP15.39■□□□□ 0.05
APOB-202ENST00000399256 GCOM1H8Y6P7 765 aaPredicted RBP15.39■□□□□ 0.05
APOB-202ENST00000399256 MYZAPP0CAP1 466 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 POLR2FP61218 127 aaKnown RBP15.39■□□□□ 0.05
APOB-202ENST00000399256 ERVK-9P63128 1117 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 LRRC55Q6ZSA7 311 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 GIMAP7Q8NHV1 300 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 LSM14BQ9BX40 385 aaKnown RBP15.39■□□□□ 0.05
APOB-202ENST00000399256 KANSL2Q9H9L4 492 aa15.39■□□□□ 0.05
APOB-202ENST00000399256 A1CFQ9NQ94 594 aaKnown RBP15.39■□□□□ 0.05
APOB-202ENST00000399256 GRID2IPA4D2P6 1211 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 RASSF9O75901 435 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 NAPAP54920 295 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 TNNC1P63316 161 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 QPCTQ16769 361 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 C6orf89Q6UWU4 347 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 USP38Q8NB14 1042 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 GOLPH3Q9H4A6 298 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 TAF1DQ9H5J8 278 aaPredicted RBP15.38■□□□□ 0.05
APOB-202ENST00000399256 BLOC1S4Q9NUP1 217 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 NHSQ6T4R5 1651 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 RBAK-RBAKDNI3L0D1 243 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 ATP2C2O75185 946 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 FGFR1OPO95684 399 aaKnown RBP15.38■□□□□ 0.05
APOB-202ENST00000399256 SERPING1P05155 500 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 GRB10Q13322 594 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 NONOQ15233 471 aaKnown RBP eCLIP15.38■□□□□ 0.05
APOB-202ENST00000399256 KIAA0753Q2KHM9 967 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 COBLL1Q53SF7 1204 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 FAM83BQ5T0W9 1011 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 PPP4R3AQ6IN85 833 aa15.38■□□□□ 0.05
APOB-202ENST00000399256 UNC13DQ70J99 1090 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms