RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SAFBQ15424 915 aaKnown RBP eCLIP14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 LY6KQ17RY6 165 aa14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 CEP55Q53EZ4 464 aa14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 NOSTRINQ8IVI9 506 aa14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 SCFD2Q8WU76 684 aa14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 RNF208Q9H0X6 261 aa14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 BRMS1Q9HCU9 246 aa14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 DDX20Q9UHI6 824 aaKnown RBP14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 DDX41Q9UJV9 622 aaKnown RBP14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 FAM184BQ9ULE4 1060 aa14.14□□□□□ -0.15
HLA-DQB1-203ENST00000399082 CYP3A7-CYP3A51PA0A087WV96 503 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 VPS37CA5D8V6 355 aaPredicted RBP14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 H3BQV1 296 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 CTAGE5O15320 804 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 SLC37A4O43826 429 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 ATP9AO75110 1047 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 HSP90AA1P07900 732 aaKnown RBP14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 KCNA2P16389 499 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 PDCP20941 246 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 UBA1P22314 1058 aaKnown RBP14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 CYP3A7P24462 503 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 DDIT3P35638 169 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 USP11P51784 963 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 TNFAIP2Q03169 654 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 RESTQ13127 1097 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 DUSP28Q4G0W2 176 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 IFFO2Q5TF58 517 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 IQSEC1Q6DN90 963 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 NEK8Q86SG6 692 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 GPRASP2Q96D09 838 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 TELO2Q9Y4R8 837 aa14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 KIAA0100Q14667 2235 aaKnown RBP14.13□□□□□ -0.15
HLA-DQB1-203ENST00000399082 MYADML2A6NDP7 307 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 FIBPO43427 364 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 STX6O43752 255 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 ADAMTS4O75173 837 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 GJB1P08034 283 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 TXNP10599 105 aaKnown RBP14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 TOB1P50616 345 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 ARHGAP1Q07960 439 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 ITGB3BPQ13352 177 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 MKRN4PQ13434 485 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 MTMR1Q13613 665 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 NBR1Q14596 966 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 LETM2Q2VYF4 491 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 MOXD1Q6UVY6 613 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 NIPA1Q7RTP0 329 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 FERMT3Q86UX7 667 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 TNS4Q8IZW8 715 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 DEFB118Q96PH6 123 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 CRISPLD2Q9H0B8 497 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 UPF3AQ9H1J1 476 aaKnown RBP14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 MRVI1Q9Y6F6 885 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 SYNRGQ9UMZ2 1314 aa14.12□□□□□ -0.15
HLA-DQB1-203ENST00000399082 DUSP11O75319 330 aaKnown RBP14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 MNX1P50219 401 aaPredicted RBP14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 NKX3-2P78367 333 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 TTLL4Q14679 1199 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 GNPTABQ3T906 1256 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 Q4G0T1 1027 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 PRR16Q569H4 304 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 MCTP1Q6DN14 999 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 PPP4R3AQ6IN85 833 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 TLK2Q86UE8 772 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 NLRX1Q86UT6 975 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 PLA2G4DQ86XP0 818 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 UIMC1Q96RL1 719 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 AGO4Q9HCK5 861 aaKnown RBP14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 KCNH7Q9NS40 1196 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 OGDHLQ9ULD0 1010 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 ZDHHC9Q9Y397 364 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 MYH15Q9Y2K3 1946 aa14.11□□□□□ -0.15
HLA-DQB1-203ENST00000399082 MSH4O15457 936 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 DHX15O43143 795 aaKnown RBP14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 SORBS3O60504 671 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 MSCO60682 206 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 SGPL1O95470 568 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 PGK1P00558 417 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 TGFB3P10600 412 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 RARBP10826 455 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 ZNF76P36508 570 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 ANP32AP39687 249 aaKnown RBP14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 GJA8P48165 433 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 GJA9P57773 515 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 CCSAPQ6IQ19 270 aaPredicted RBP14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 KLHDC9Q8NEP7 349 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 ETNPPLQ8TBG4 499 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 U2AF1L4Q8WU68 220 aaKnown RBP14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 GJA10Q969M2 543 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 XPNPEP3Q9NQH7 507 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 PKD2L1Q9P0L9 805 aa14.1□□□□□ -0.15
HLA-DQB1-203ENST00000399082 NKRFO15226 690 aaKnown RBP eCLIP14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 DYNC1LI2O43237 492 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 CCNT1O60563 726 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 FARP2O94887 1054 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 GGPS1O95749 300 aa14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 GCFC2P16383 781 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 ATP2B1P20020 1258 aa14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 SETQ01105 290 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 CELF3Q5SZQ8 465 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms