RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 ZFYVE27Q5T4F4 411 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 PEX26Q7Z412 305 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 PNMA8AQ86V59 439 aaPredicted RBP16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 ZNF34Q8IZ26 560 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 SEMA6BQ9H3T3 888 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 ATP8A2Q9NTI2 1148 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 PANK4Q9NVE7 773 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 BCS1LQ9Y276 419 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 MRC1P22897 1456 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 NPHP3-ACAD11A0A0J9YXS1 232 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 CYP4A11Q02928 519 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 ITPK1Q13572 414 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 UBE4AQ14139 1066 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 FAM26FQ5R3K3 315 aa16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 PAXIP1Q6ZW49 1069 aaPredicted RBP16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 NOVA2Q9UNW9 492 aaKnown RBP16.19■□□□□ 0.18
RAPGEF4-201ENST00000397081 RPSAP08865 295 aaKnown RBP16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 KLRC1P26715 233 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 IFNAR2P48551 515 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 ADAM9Q13443 819 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 TXNRD3Q86VQ6 643 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 TBC1D31Q96DN5 1066 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 ZNF287Q9HBT7 754 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 XIRP1Q702N8 1843 aaKnown RBP16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 AGPSO00116 658 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 ACTN1P12814 892 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 FAM83BQ5T0W9 1011 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 EMBQ6PCB8 327 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 VPS36Q86VN1 386 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 SRP68Q9UHB9 627 aaKnown RBP16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 ATP8A1Q9Y2Q0 1164 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 CRYBG1Q9Y4K1 1723 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 ERVV-1B6SEH8 477 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 NPY5RQ15761 445 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 MCTP2Q6DN12 878 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 MGARPQ8TDB4 240 aa16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 U2AF1L4Q8WU68 220 aaKnown RBP16.18■□□□□ 0.18
RAPGEF4-201ENST00000397081 RIMBP2O15034 1052 aa16.17■□□□□ 0.18
RAPGEF4-201ENST00000397081 HNRNPH1P31943 449 aaKnown RBP16.17■□□□□ 0.18
RAPGEF4-201ENST00000397081 HAUS3Q68CZ6 603 aa16.17■□□□□ 0.18
RAPGEF4-201ENST00000397081 GPBP1Q86WP2 473 aa16.17■□□□□ 0.18
RAPGEF4-201ENST00000397081 BAIAP2L1Q9UHR4 511 aa16.17■□□□□ 0.18
RAPGEF4-201ENST00000397081 E9PMD0 336 aa16.17■□□□□ 0.18
RAPGEF4-201ENST00000397081 VIMP08670 466 aaKnown RBP16.17■□□□□ 0.18
RAPGEF4-201ENST00000397081 RBM5P52756 815 aaKnown RBP eCLIP16.17■□□□□ 0.18
RAPGEF4-201ENST00000397081 MAEAQ7L5Y9 396 aa16.17■□□□□ 0.18
RAPGEF4-201ENST00000397081 KIAA0895Q8NCT3 520 aa16.17■□□□□ 0.18
RAPGEF4-201ENST00000397081 ZNF507Q8TCN5 953 aa16.17■□□□□ 0.18
RAPGEF4-201ENST00000397081 QTRT2Q9H974 415 aaKnown RBP16.17■□□□□ 0.18
RAPGEF4-201ENST00000397081 PCDHA12Q9UN75 941 aa16.17■□□□□ 0.18
RAPGEF4-201ENST00000397081 CLIC2O15247 247 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 PRPF6O94906 941 aaKnown RBP16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 NF2P35240 595 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 SLCO1A2P46721 670 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 ADCY7P51828 1080 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 HDLBPQ00341 1268 aaKnown RBP16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 SLC20A2Q08357 652 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 TTMPQ5BVD1 217 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 CD248Q9HCU0 757 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 SALL4Q9UJQ4 1053 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 MYH8P13535 1937 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 USP17L5A8MUK1 530 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 LSP1P33241 339 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 KCNB1Q14721 858 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 PLCD4Q9BRC7 762 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 PLAGL2Q9UPG8 496 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 CETN3O15182 167 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 CHMP2AO43633 222 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 RCAN1P53805 252 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 ADCY1Q08828 1119 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 ARHGAP44Q17R89 818 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 MYCBPQ99417 103 aaPredicted RBP16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 LAMA4Q16363 1823 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 KLRC4O43908 158 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 RFC4P35249 363 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 COPB2P35606 906 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 PABPC4Q13310 644 aaKnown RBP eCLIP16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 ARFGAP2Q8N6H7 521 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 KBTBD4Q9NVX7 518 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 BARHL2Q9NY43 387 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 AMACRQ9UHK6 382 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 COL4A3BPQ9Y5P4 624 aa16.16■□□□□ 0.18
RAPGEF4-201ENST00000397081 USP54Q70EL1 1684 aa16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 SFI1A8K8P3 1242 aa16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 FKBP3Q00688 224 aaKnown RBP16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 TMED8Q6PL24 325 aaPredicted RBP16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 CCDC65Q8IXS2 484 aa16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 RAD51CO43502 376 aa16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 CYTH3O43739 400 aa16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 NR2F2P24468 414 aa16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 SEPT12Q8IYM1 358 aa16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 ZNF804BA4D1E1 1349 aa16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 SNAP25P60880 206 aa16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 ALS2CLQ60I27 953 aa16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 MSL1Q68DK7 614 aa16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 NUDT12Q9BQG2 462 aa16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 GGT7Q9UJ14 662 aa16.15■□□□□ 0.18
RAPGEF4-201ENST00000397081 GBP2P32456 591 aaPredicted RBP16.14■□□□□ 0.17
RAPGEF4-201ENST00000397081 KCTD1Q719H9 257 aa16.14■□□□□ 0.17
RAPGEF4-201ENST00000397081 TNFRSF25Q93038 417 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms