RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 TRAPPC10P48553 1259 aa18.67■□□□□ 0.58
AP1S3-202ENST00000396653 SEMA3FQ13275 785 aa18.67■□□□□ 0.58
AP1S3-202ENST00000396653 MTMR1Q13613 665 aa18.67■□□□□ 0.58
AP1S3-202ENST00000396653 MCTP1Q6DN14 999 aa18.67■□□□□ 0.58
AP1S3-202ENST00000396653 PPP4R3AQ6IN85 833 aa18.67■□□□□ 0.58
AP1S3-202ENST00000396653 ABHD8Q96I13 439 aa18.67■□□□□ 0.58
AP1S3-202ENST00000396653 ZFP91Q96JP5 570 aaPredicted RBP18.67■□□□□ 0.58
AP1S3-202ENST00000396653 SENP7Q9BQF6 1050 aa18.67■□□□□ 0.58
AP1S3-202ENST00000396653 DDX41Q9UJV9 622 aaKnown RBP18.67■□□□□ 0.58
AP1S3-202ENST00000396653 ADCY6O43306 1168 aa18.66■□□□□ 0.58
AP1S3-202ENST00000396653 ARIH2O95376 493 aa18.66■□□□□ 0.58
AP1S3-202ENST00000396653 TXNP10599 105 aaKnown RBP18.66■□□□□ 0.58
AP1S3-202ENST00000396653 NKX3-2P78367 333 aa18.66■□□□□ 0.58
AP1S3-202ENST00000396653 ORC2Q13416 577 aaPredicted RBP18.66■□□□□ 0.58
AP1S3-202ENST00000396653 Q4G0T1 1027 aa18.66■□□□□ 0.58
AP1S3-202ENST00000396653 LHX8Q68G74 356 aa18.66■□□□□ 0.58
AP1S3-202ENST00000396653 BRAPQ7Z569 592 aa18.66■□□□□ 0.58
AP1S3-202ENST00000396653 PLA2G4DQ86XP0 818 aa18.66■□□□□ 0.58
AP1S3-202ENST00000396653 SPRYD3Q8NCJ5 442 aa18.66■□□□□ 0.58
AP1S3-202ENST00000396653 TMEM106CQ9BVX2 250 aa18.66■□□□□ 0.58
AP1S3-202ENST00000396653 UPF3AQ9H1J1 476 aaKnown RBP18.66■□□□□ 0.58
AP1S3-202ENST00000396653 NOL7Q9UMY1 257 aaKnown RBP18.66■□□□□ 0.58
AP1S3-202ENST00000396653 MTMR6Q9Y217 621 aa18.66■□□□□ 0.58
AP1S3-202ENST00000396653 UBA1P22314 1058 aaKnown RBP18.65■□□□□ 0.58
AP1S3-202ENST00000396653 NEDD9Q14511 834 aa18.65■□□□□ 0.58
AP1S3-202ENST00000396653 LETM2Q2VYF4 491 aa18.65■□□□□ 0.58
AP1S3-202ENST00000396653 GIMAP8Q8ND71 665 aaPredicted RBP18.65■□□□□ 0.58
AP1S3-202ENST00000396653 CYP2W1Q8TAV3 490 aa18.65■□□□□ 0.58
AP1S3-202ENST00000396653 EMID1Q96A84 441 aaPredicted RBP18.65■□□□□ 0.58
AP1S3-202ENST00000396653 LENG9Q96B70 501 aa18.65■□□□□ 0.58
AP1S3-202ENST00000396653 DEFB118Q96PH6 123 aa18.65■□□□□ 0.58
AP1S3-202ENST00000396653 CRISPLD2Q9H0B8 497 aa18.65■□□□□ 0.58
AP1S3-202ENST00000396653 KCNH7Q9NS40 1196 aa18.65■□□□□ 0.58
AP1S3-202ENST00000396653 OGDHLQ9ULD0 1010 aa18.65■□□□□ 0.58
AP1S3-202ENST00000396653 KIAA0100Q14667 2235 aaKnown RBP18.65■□□□□ 0.58
AP1S3-202ENST00000396653 SGPL1O95470 568 aa18.64■□□□□ 0.57
AP1S3-202ENST00000396653 TDP2O95551 362 aa18.64■□□□□ 0.57
AP1S3-202ENST00000396653 MYCP01106 439 aaPredicted RBP18.64■□□□□ 0.57
AP1S3-202ENST00000396653 GH1P01241 217 aa18.64■□□□□ 0.57
AP1S3-202ENST00000396653 KCNA2P16389 499 aa18.64■□□□□ 0.57
AP1S3-202ENST00000396653 GJA8P48165 433 aa18.64■□□□□ 0.57
AP1S3-202ENST00000396653 GJA9P57773 515 aa18.64■□□□□ 0.57
AP1S3-202ENST00000396653 PRR16Q569H4 304 aa18.64■□□□□ 0.57
AP1S3-202ENST00000396653 RILPL1Q5EBL4 403 aa18.64■□□□□ 0.57
AP1S3-202ENST00000396653 TLK2Q86UE8 772 aa18.64■□□□□ 0.57
AP1S3-202ENST00000396653 U2AF1L4Q8WU68 220 aaKnown RBP18.64■□□□□ 0.57
AP1S3-202ENST00000396653 SPC25Q9HBM1 224 aa18.64■□□□□ 0.57
AP1S3-202ENST00000396653 XPNPEP3Q9NQH7 507 aa18.64■□□□□ 0.57
AP1S3-202ENST00000396653 DDX25Q9UHL0 483 aaKnown RBP18.64■□□□□ 0.57
AP1S3-202ENST00000396653 RBM19Q9Y4C8 960 aaKnown RBP18.64■□□□□ 0.57
AP1S3-202ENST00000396653 NFASCO94856 1347 aa18.64■□□□□ 0.57
AP1S3-202ENST00000396653 SYNRGQ9UMZ2 1314 aa18.64■□□□□ 0.57
AP1S3-202ENST00000396653 CCNT1O60563 726 aaKnown RBP18.63■□□□□ 0.57
AP1S3-202ENST00000396653 ADAMTS4O75173 837 aa18.63■□□□□ 0.57
AP1S3-202ENST00000396653 ARP10275 920 aa18.63■□□□□ 0.57
AP1S3-202ENST00000396653 CST5P28325 142 aaPredicted RBP18.63■□□□□ 0.57
AP1S3-202ENST00000396653 ARHGAP1Q07960 439 aa18.63■□□□□ 0.57
AP1S3-202ENST00000396653 RESTQ13127 1097 aa18.63■□□□□ 0.57
AP1S3-202ENST00000396653 LY6KQ17RY6 165 aa18.63■□□□□ 0.57
AP1S3-202ENST00000396653 ANO1Q5XXA6 986 aa18.63■□□□□ 0.57
AP1S3-202ENST00000396653 LENG1Q96BZ8 264 aaPredicted RBP18.63■□□□□ 0.57
AP1S3-202ENST00000396653 ZSCAN16Q9H4T2 348 aaPredicted RBP18.63■□□□□ 0.57
AP1S3-202ENST00000396653 AGO4Q9HCK5 861 aaKnown RBP18.63■□□□□ 0.57
AP1S3-202ENST00000396653 TBX3O15119 743 aa18.62■□□□□ 0.57
AP1S3-202ENST00000396653 GGPS1O95749 300 aa18.62■□□□□ 0.57
AP1S3-202ENST00000396653 SP2Q02086 613 aa18.62■□□□□ 0.57
AP1S3-202ENST00000396653 LAMC2Q13753 1193 aa18.62■□□□□ 0.57
AP1S3-202ENST00000396653 TTC38Q5R3I4 469 aa18.62■□□□□ 0.57
AP1S3-202ENST00000396653 CELF3Q5SZQ8 465 aaKnown RBP18.62■□□□□ 0.57
AP1S3-202ENST00000396653 TMEM63BQ5T3F8 832 aa18.62■□□□□ 0.57
AP1S3-202ENST00000396653 METTL7BQ6UX53 244 aa18.62■□□□□ 0.57
AP1S3-202ENST00000396653 OR6J1Q8NGC5 347 aa18.62■□□□□ 0.57
AP1S3-202ENST00000396653 AP5M1Q9H0R1 490 aa18.62■□□□□ 0.57
AP1S3-202ENST00000396653 WDR81Q562E7 1941 aa18.61■□□□□ 0.57
AP1S3-202ENST00000396653 SLC37A4O43826 429 aa18.61■□□□□ 0.57
AP1S3-202ENST00000396653 ATP9AO75110 1047 aa18.61■□□□□ 0.57
AP1S3-202ENST00000396653 FARP2O94887 1054 aaPredicted RBP18.61■□□□□ 0.57
AP1S3-202ENST00000396653 GJC2Q5T442 439 aaPredicted RBP18.61■□□□□ 0.57
AP1S3-202ENST00000396653 MYSM1Q5VVJ2 828 aa18.61■□□□□ 0.57
AP1S3-202ENST00000396653 RNF180Q86T96 592 aa18.61■□□□□ 0.57
AP1S3-202ENST00000396653 DHX37Q8IY37 1157 aaKnown RBP18.61■□□□□ 0.57
AP1S3-202ENST00000396653 ANKLE1Q8NAG6 615 aa18.61■□□□□ 0.57
AP1S3-202ENST00000396653 ARRDC4Q8NCT1 418 aa18.61■□□□□ 0.57
AP1S3-202ENST00000396653 KLHDC9Q8NEP7 349 aa18.61■□□□□ 0.57
AP1S3-202ENST00000396653 COPS5Q92905 334 aa18.61■□□□□ 0.57
AP1S3-202ENST00000396653 SDF4Q9BRK5 362 aa18.61■□□□□ 0.57
AP1S3-202ENST00000396653 ZNF577Q9BSK1 485 aa18.61■□□□□ 0.57
AP1S3-202ENST00000396653 KCNMB3Q9NPA1 279 aa18.61■□□□□ 0.57
AP1S3-202ENST00000396653 TBC1D22BQ9NU19 505 aa18.61■□□□□ 0.57
AP1S3-202ENST00000396653 DAXXQ9UER7 740 aaPredicted RBP18.61■□□□□ 0.57
AP1S3-202ENST00000396653 IPO5O00410 1097 aaKnown RBP18.6■□□□□ 0.57
AP1S3-202ENST00000396653 WNT7AO00755 349 aa18.6■□□□□ 0.57
AP1S3-202ENST00000396653 CTAGE5O15320 804 aa18.6■□□□□ 0.57
AP1S3-202ENST00000396653 MSH4O15457 936 aa18.6■□□□□ 0.57
AP1S3-202ENST00000396653 DYNC1LI2O43237 492 aaPredicted RBP18.6■□□□□ 0.57
AP1S3-202ENST00000396653 ZSCAN22P10073 491 aaPredicted RBP18.6■□□□□ 0.57
AP1S3-202ENST00000396653 CPT1AP50416 773 aa18.6■□□□□ 0.57
AP1S3-202ENST00000396653 TOB1P50616 345 aaPredicted RBP18.6■□□□□ 0.57
AP1S3-202ENST00000396653 BRDTQ58F21 947 aaPredicted RBP18.6■□□□□ 0.57
AP1S3-202ENST00000396653 FERMT3Q86UX7 667 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms