RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 ZNF662Q6ZS27 426 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 ANKRD13CQ8N6S4 541 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 DAGLBQ8NCG7 672 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 KIAA0895Q8NCT3 520 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 MAGEF1Q9HAY2 307 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 BIN2Q9UBW5 565 aaPredicted RBP15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 CDK5RAP2Q96SN8 1893 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 EPHB6O15197 1021 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 CACNB3P54284 484 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 USP17L2Q6R6M4 530 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 SND1Q7KZF4 910 aaKnown RBP eCLIP15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 KRT25Q7Z3Z0 450 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 NEK8Q86SG6 692 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 ERGIC2Q96RQ1 377 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 C7orf25Q9BPX7 421 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 SEMA6BQ9H3T3 888 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 SMARCAL1Q9NZC9 954 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 SNX12Q9UMY4 172 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 PCDHA13Q9Y5I0 950 aa15.55■□□□□ 0.08
CCHCR1-203ENST00000396268 GOLGA6BA6NDN3 693 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 ECE2O60344 883 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 PRPF6O94906 941 aaKnown RBP15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 EIF4A3P38919 411 aaKnown RBP15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 KIF11P52732 1056 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 NAP1L1P55209 391 aaKnown RBP15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 SLC7A5Q01650 507 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 KCTD19Q17RG1 926 aaPredicted RBP15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 CCDC181Q5TID7 509 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 RRAGAQ7L523 313 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 BCAS4Q8TDM0 211 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 TBCKQ8TEA7 893 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 HDAC7Q8WUI4 952 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 CDK5RAP3Q96JB5 506 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 C6orf50Q9HD87 102 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 DDX4Q9NQI0 724 aaKnown RBP15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 ARHGAP20Q9P2F6 1191 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 ERLIN2O94905 339 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 BRD2P25440 801 aaKnown RBP15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 SV2BQ7L1I2 683 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 RRP36Q96EU6 259 aaKnown RBP15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 LRRC1Q9BTT6 524 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 TANGO6Q9C0B7 1094 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 NDST4Q9H3R1 872 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 PPP1R1BQ9UD71 204 aaPredicted RBP15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 SEC63Q9UGP8 760 aaKnown RBP15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 PALM3A6NDB9 673 aaPredicted RBP15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 GOLGA6CA6NDK9 693 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 RPS6KA5O75582 802 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 LDHCP07864 332 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 GOLGA6DP0CG33 693 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 GNA11P29992 359 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 VWA3BQ502W6 1294 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 NFRKBQ6P4R8 1299 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 CREG2Q8IUH2 290 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 TBC1D22AQ8WUA7 517 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 CNKSR1Q969H4 720 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 ZMYND12Q9H0C1 365 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 GOLGA6AQ9NYA3 693 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 DMGDHQ9UI17 866 aaKnown RBP15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 PLAGL2Q9UPG8 496 aa15.54■□□□□ 0.08
CCHCR1-203ENST00000396268 ZSCAN29Q8IWY8 852 aaPredicted RBP15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 FAM76AQ8TAV0 307 aa15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 PURBQ96QR8 312 aaKnown RBP15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 EHD2Q9NZN4 543 aa15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 FAM169AQ9Y6X4 670 aa15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 GAKO14976 1311 aa15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 DLEC1Q9Y238 1755 aa15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 ATP1A2P50993 1020 aa15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 DNA2P51530 1060 aa15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 SEMA3FQ13275 785 aa15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 KCTD16Q68DU8 428 aa15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 ANKS1AQ92625 1134 aa15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 ALS2CR12Q96Q35 445 aa15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 SH2D4AQ9H788 454 aa15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 FAM184BQ9ULE4 1060 aa15.53■□□□□ 0.08
CCHCR1-203ENST00000396268 LAMB1P07942 1786 aa15.52■□□□□ 0.08
CCHCR1-203ENST00000396268 A0A1W2PQJ5 194 aa15.52■□□□□ 0.08
CCHCR1-203ENST00000396268 YDJCA8MPS7 323 aa15.52■□□□□ 0.08
CCHCR1-203ENST00000396268 PPP1R2P41236 205 aa15.52■□□□□ 0.08
CCHCR1-203ENST00000396268 MAGEA1P43355 309 aa15.52■□□□□ 0.08
CCHCR1-203ENST00000396268 IRAK1P51617 712 aa15.52■□□□□ 0.08
CCHCR1-203ENST00000396268 GNGT1P63211 74 aa15.52■□□□□ 0.08
CCHCR1-203ENST00000396268 CACNA2D4Q7Z3S7 1137 aa15.52■□□□□ 0.08
CCHCR1-203ENST00000396268 SPATA4Q8NEY3 305 aa15.52■□□□□ 0.08
CCHCR1-203ENST00000396268 MMTAG2Q9BU76 263 aaKnown RBP15.52■□□□□ 0.08
CCHCR1-203ENST00000396268 UBA5Q9GZZ9 404 aa15.52■□□□□ 0.08
CCHCR1-203ENST00000396268 TMEM260Q9NX78 707 aa15.52■□□□□ 0.08
CCHCR1-203ENST00000396268 ZC3H4Q9UPT8 1303 aaKnown RBP15.52■□□□□ 0.08
CCHCR1-203ENST00000396268 LRRC53A6NM62 1247 aa15.52■□□□□ 0.07
CCHCR1-203ENST00000396268 AGPSO00116 658 aa15.52■□□□□ 0.07
CCHCR1-203ENST00000396268 NCK2O43639 380 aa15.52■□□□□ 0.07
CCHCR1-203ENST00000396268 NFIAQ12857 509 aa15.52■□□□□ 0.07
CCHCR1-203ENST00000396268 TDRD12Q587J7 1177 aaKnown RBP15.52■□□□□ 0.07
CCHCR1-203ENST00000396268 FIGNQ5HY92 759 aa15.52■□□□□ 0.07
CCHCR1-203ENST00000396268 TMED8Q6PL24 325 aaPredicted RBP15.52■□□□□ 0.07
CCHCR1-203ENST00000396268 ZFPM1Q8IX07 1006 aa15.52■□□□□ 0.07
CCHCR1-203ENST00000396268 EFCAB13Q8IY85 973 aa15.52■□□□□ 0.07
CCHCR1-203ENST00000396268 PIGSQ96S52 555 aa15.52■□□□□ 0.07
CCHCR1-203ENST00000396268 C10orf71Q711Q0 1435 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms