RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 PKNOX2Q96KN3 472 aa11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 AP5M1Q9H0R1 490 aa11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 SPC25Q9HBM1 224 aa11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 MAP3K20Q9NYL2 800 aaKnown RBP11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 GNEQ9Y223 722 aaKnown RBP11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 FRMPD3Q5JV73 1810 aa11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 ADAMTS4O75173 837 aa11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 UBA1P22314 1058 aaKnown RBP11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 PSMC6P62333 389 aa11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 GHRHRQ02643 423 aa11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 MTMR1Q13613 665 aa11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 FSCN1Q16658 493 aaKnown RBP11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 PRR16Q569H4 304 aa11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 MCTP1Q6DN14 999 aa11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 IQSEC1Q6DN90 963 aa11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 MORC4Q8TE76 937 aa11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 PHF20Q9BVI0 1012 aa11.52□□□□□ -0.57
THUMPD1-202ENST00000396083 HSP90AA1P07900 732 aaKnown RBP11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 ARP10275 920 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 SEMA3FQ13275 785 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 BECN1Q14457 450 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 LETM2Q2VYF4 491 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 PCNX4Q63HM2 1172 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 NECAB2Q7Z6G3 386 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 DHX37Q8IY37 1157 aaKnown RBP11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 DIS3L2Q8IYB7 885 aaKnown RBP11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 ARRDC4Q8NCT1 418 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 MLXIPQ9HAP2 919 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 DDX41Q9UJV9 622 aaKnown RBP11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 SMC3Q9UQE7 1217 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 LRRC37A2A6NM11 1700 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 STK36Q9NRP7 1315 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 TDP2O95551 362 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 MYL3P08590 195 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 GNL2Q13823 731 aaKnown RBP11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 GNPTABQ3T906 1256 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 CCDC62Q6P9F0 684 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 WASF1Q92558 559 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 KCNH7Q9NS40 1196 aa11.51□□□□□ -0.57
THUMPD1-202ENST00000396083 ESYT2A0FGR8 921 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 ZNF286BP0CG31 522 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 TRIM50Q86XT4 487 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 BICD2Q8TD16 824 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 SPATA33Q96N06 139 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 INPP4AQ96PE3 977 aaPredicted RBP11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 SH3GLB2Q9NR46 395 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 CTAGE5O15320 804 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 FOSP01100 380 aaPredicted RBP11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 SYN1P17600 705 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 SREBF1P36956 1147 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 ACLYP53396 1101 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 AP3B2Q13367 1082 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 CEP55Q53EZ4 464 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 FOXD4L5Q5VV16 416 aaPredicted RBP11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 FOXD4L4Q8WXT5 416 aaPredicted RBP11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 C11orf49Q9H6J7 331 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 NRBP1Q9UHY1 535 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 ATP11BQ9Y2G3 1177 aa11.5□□□□□ -0.57
THUMPD1-202ENST00000396083 A0A1W2PQ45 241 aaPredicted RBP11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 A0A1W2PQY0 241 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 K7ELQ4 463 aaPredicted RBP11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 DNM1LO00429 736 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 NOP56O00567 594 aaKnown RBP11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 WNT7AO00755 349 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 PQBP1O60828 265 aaKnown RBP11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 MMP1P03956 469 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 KRT2P35908 639 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 MCM2P49736 904 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 MLLT1Q03111 559 aaPredicted RBP11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 FERMT3Q86UX7 667 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 PLA2G4DQ86XP0 818 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 HSCBQ8IWL3 235 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 EHMT1Q9H9B1 1298 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 STARD7Q9NQZ5 370 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 EDIL3O43854 480 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 GJA9P57773 515 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 HMGN5P82970 282 aaKnown RBP11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 ARHGAP1Q07960 439 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 LRRC26Q2I0M4 334 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 FAM47CQ5HY64 1035 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 MXRA8Q9BRK3 442 aa11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 LLPHQ9BRT6 129 aaKnown RBP11.49□□□□□ -0.57
THUMPD1-202ENST00000396083 PRUNE2Q8WUY3 3088 aa11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 VPS37CA5D8V6 355 aaPredicted RBP11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 FIBPO43427 364 aa11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 CHMP2AO43633 222 aa11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 CCNT1O60563 726 aaKnown RBP11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 GH1P01241 217 aa11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 NONOQ15233 471 aaKnown RBP eCLIP11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 UTP14CQ5TAP6 766 aaKnown RBP11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 MYSM1Q5VVJ2 828 aa11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 NLRX1Q86UT6 975 aa11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 SAMD3Q8N6K7 520 aa11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 GLT1D1Q96MS3 346 aa11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 GLT8D2Q9H1C3 349 aa11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 BRMS1Q9HCU9 246 aa11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 FRMPD4Q14CM0 1322 aa11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 KIF28PB7ZC32 967 aa11.48□□□□□ -0.57
THUMPD1-202ENST00000396083 H3BQV1 296 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms