RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 FAM86C2PA6NEL3 165 aa15.71■□□□□ 0.11
SCAF11-203ENST00000395453 PI4K2BG5E9Z4 385 aa15.71■□□□□ 0.11
SCAF11-203ENST00000395453 TAP1Q03518 808 aa15.71■□□□□ 0.11
SCAF11-203ENST00000395453 STXBP2Q15833 593 aa15.71■□□□□ 0.11
SCAF11-203ENST00000395453 BRDTQ58F21 947 aaPredicted RBP15.71■□□□□ 0.11
SCAF11-203ENST00000395453 DEFB128Q7Z7B8 93 aa15.71■□□□□ 0.11
SCAF11-203ENST00000395453 MB21D2Q8IYB1 491 aaPredicted RBP15.71■□□□□ 0.11
SCAF11-203ENST00000395453 PCDHA1Q9Y5I3 950 aa15.71■□□□□ 0.11
SCAF11-203ENST00000395453 BAZ2BQ9UIF8 2168 aaKnown RBP15.71■□□□□ 0.11
SCAF11-203ENST00000395453 CYTH3O43739 400 aa15.7■□□□□ 0.1
SCAF11-203ENST00000395453 CFBP00751 764 aa15.7■□□□□ 0.1
SCAF11-203ENST00000395453 MYL3P08590 195 aa15.7■□□□□ 0.1
SCAF11-203ENST00000395453 RFC2P35250 354 aa15.7■□□□□ 0.1
SCAF11-203ENST00000395453 WTAPQ15007 396 aa15.7■□□□□ 0.1
SCAF11-203ENST00000395453 SART3Q15020 963 aaKnown RBP15.7■□□□□ 0.1
SCAF11-203ENST00000395453 CHST3Q7LGC8 479 aa15.7■□□□□ 0.1
SCAF11-203ENST00000395453 ALYREFQ86V81 257 aaKnown RBP15.7■□□□□ 0.1
SCAF11-203ENST00000395453 KHSRPQ92945 711 aaKnown RBP eCLIP15.7■□□□□ 0.12e-6■■■■□ 20
SCAF11-203ENST00000395453 MAP3K14Q99558 947 aa15.7■□□□□ 0.1
SCAF11-203ENST00000395453 MTA3Q9BTC8 594 aa15.7■□□□□ 0.1
SCAF11-203ENST00000395453 LSG1Q9H089 658 aaKnown RBP15.7■□□□□ 0.1
SCAF11-203ENST00000395453 GPHNQ9NQX3 736 aaPredicted RBP15.7■□□□□ 0.1
SCAF11-203ENST00000395453 PXMP2Q9NR77 195 aa15.7■□□□□ 0.1
SCAF11-203ENST00000395453 EIF3JO75822 258 aaKnown RBP15.69■□□□□ 0.1
SCAF11-203ENST00000395453 NR3C2P08235 984 aa15.69■□□□□ 0.1
SCAF11-203ENST00000395453 CYP2C9P11712 490 aa15.69■□□□□ 0.1
SCAF11-203ENST00000395453 ARHGAP1Q07960 439 aa15.69■□□□□ 0.1
SCAF11-203ENST00000395453 TRAF1Q13077 416 aa15.69■□□□□ 0.1
SCAF11-203ENST00000395453 GRB10Q13322 594 aa15.69■□□□□ 0.1
SCAF11-203ENST00000395453 LY6KQ17RY6 165 aa15.69■□□□□ 0.1
SCAF11-203ENST00000395453 NBPF20Q3BBV1 942 aa15.69■□□□□ 0.1
SCAF11-203ENST00000395453 ARHGEF16Q5VV41 709 aa15.69■□□□□ 0.1
SCAF11-203ENST00000395453 NFRKBQ6P4R8 1299 aa15.69■□□□□ 0.1
SCAF11-203ENST00000395453 SEPT14Q6ZU15 432 aa15.69■□□□□ 0.1
SCAF11-203ENST00000395453 PIGSQ96S52 555 aa15.69■□□□□ 0.1
SCAF11-203ENST00000395453 PLSCR2Q9NRY7 297 aa15.69■□□□□ 0.1
SCAF11-203ENST00000395453 TRMT13Q9NUP7 481 aaKnown RBP15.69■□□□□ 0.1
SCAF11-203ENST00000395453 BRWD1Q9NSI6 2320 aa15.69■□□□□ 0.1
SCAF11-203ENST00000395453 PNMA6FA0A0J9YX94 578 aa15.68■□□□□ 0.1
SCAF11-203ENST00000395453 EIF2AK2P19525 551 aaKnown RBP15.68■□□□□ 0.1
SCAF11-203ENST00000395453 PTPN11Q06124 597 aaPredicted RBP15.68■□□□□ 0.1
SCAF11-203ENST00000395453 NECTIN1Q15223 517 aa15.68■□□□□ 0.1
SCAF11-203ENST00000395453 CATIPQ7Z7H3 387 aa15.68■□□□□ 0.1
SCAF11-203ENST00000395453 HERC6Q8IVU3 1022 aa15.68■□□□□ 0.1
SCAF11-203ENST00000395453 ESYT1Q9BSJ8 1104 aa15.68■□□□□ 0.1
SCAF11-203ENST00000395453 LY9Q9HBG7 655 aa15.68■□□□□ 0.1
SCAF11-203ENST00000395453 LMCD1Q9NZU5 365 aa15.68■□□□□ 0.1
SCAF11-203ENST00000395453 DDX41Q9UJV9 622 aaKnown RBP15.68■□□□□ 0.1
SCAF11-203ENST00000395453 PRR33A8MZF0 331 aa15.68■□□□□ 0.1
SCAF11-203ENST00000395453 GH1P01241 217 aa15.68■□□□□ 0.1
SCAF11-203ENST00000395453 VSIG10LQ86VR7 867 aa15.68■□□□□ 0.1
SCAF11-203ENST00000395453 RETREG2Q8NC44 543 aa15.68■□□□□ 0.1
SCAF11-203ENST00000395453 AFG1LQ8WV93 481 aa15.68■□□□□ 0.1
SCAF11-203ENST00000395453 EMID1Q96A84 441 aaPredicted RBP15.68■□□□□ 0.1
SCAF11-203ENST00000395453 PDCD2LQ9BRP1 358 aa15.68■□□□□ 0.1
SCAF11-203ENST00000395453 FTOQ9C0B1 505 aaKnown RBP eCLIP15.68■□□□□ 0.1
SCAF11-203ENST00000395453 SLC27A2O14975 620 aa15.67■□□□□ 0.1
SCAF11-203ENST00000395453 RGS20O76081 388 aa15.67■□□□□ 0.1
SCAF11-203ENST00000395453 ARHGEF15O94989 841 aa15.67■□□□□ 0.1
SCAF11-203ENST00000395453 MMP3P08254 477 aa15.67■□□□□ 0.1
SCAF11-203ENST00000395453 IQCF3P0C7M6 154 aa15.67■□□□□ 0.1
SCAF11-203ENST00000395453 SMARCA1P28370 1054 aa15.67■□□□□ 0.1
SCAF11-203ENST00000395453 HOXA13P31271 388 aaPredicted RBP15.67■□□□□ 0.1
SCAF11-203ENST00000395453 COL9A3Q14050 684 aaPredicted RBP15.67■□□□□ 0.1
SCAF11-203ENST00000395453 BMP2KLQ5H9B9 411 aa15.67■□□□□ 0.1
SCAF11-203ENST00000395453 HOMER1Q86YM7 354 aa15.67■□□□□ 0.1
SCAF11-203ENST00000395453 TMTC2Q8N394 836 aa15.67■□□□□ 0.1
SCAF11-203ENST00000395453 SPZ1Q9BXG8 430 aa15.67■□□□□ 0.1
SCAF11-203ENST00000395453 CD320Q9NPF0 282 aa15.67■□□□□ 0.1
SCAF11-203ENST00000395453 GCOM1H8Y6P7 765 aaPredicted RBP15.66■□□□□ 0.1
SCAF11-203ENST00000395453 PRC1O43663 620 aa15.66■□□□□ 0.1
SCAF11-203ENST00000395453 LPXNO60711 386 aa15.66■□□□□ 0.1
SCAF11-203ENST00000395453 BAIAP3O94812 1187 aa15.66■□□□□ 0.1
SCAF11-203ENST00000395453 POLR2MP0CAP2 368 aa15.66■□□□□ 0.1
SCAF11-203ENST00000395453 MCM5P33992 734 aa15.66■□□□□ 0.1
SCAF11-203ENST00000395453 PGM5Q15124 567 aa15.66■□□□□ 0.1
SCAF11-203ENST00000395453 KCNV1Q6PIU1 500 aa15.66■□□□□ 0.1
SCAF11-203ENST00000395453 CENPQQ7L2Z9 268 aaPredicted RBP15.66■□□□□ 0.1
SCAF11-203ENST00000395453 SESTD1Q86VW0 696 aa15.66■□□□□ 0.1
SCAF11-203ENST00000395453 ZNF654Q8IZM8 581 aa15.66■□□□□ 0.1
SCAF11-203ENST00000395453 KAT2BQ92831 832 aa15.66■□□□□ 0.1
SCAF11-203ENST00000395453 TMEM87BQ96K49 555 aa15.66■□□□□ 0.1
SCAF11-203ENST00000395453 SCN5AQ14524 2016 aa15.66■□□□□ 0.1
SCAF11-203ENST00000395453 MYH7BA7E2Y1 1941 aa15.65■□□□□ 0.1
SCAF11-203ENST00000395453 DDAH1O94760 285 aa15.65■□□□□ 0.1
SCAF11-203ENST00000395453 TGFB3P10600 412 aa15.65■□□□□ 0.1
SCAF11-203ENST00000395453 HOXD8P13378 290 aaPredicted RBP15.65■□□□□ 0.1
SCAF11-203ENST00000395453 CASTP20810 708 aaKnown RBP15.65■□□□□ 0.1
SCAF11-203ENST00000395453 LIFRP42702 1097 aa15.65■□□□□ 0.1
SCAF11-203ENST00000395453 BFSP2Q13515 415 aa15.65■□□□□ 0.1
SCAF11-203ENST00000395453 LAMC2Q13753 1193 aa15.65■□□□□ 0.1
SCAF11-203ENST00000395453 DGKDQ16760 1214 aa15.65■□□□□ 0.1
SCAF11-203ENST00000395453 FAM47CQ5HY64 1035 aa15.65■□□□□ 0.1
SCAF11-203ENST00000395453 CREB3L3Q68CJ9 461 aa15.65■□□□□ 0.1
SCAF11-203ENST00000395453 CASC1Q6TDU7 716 aa15.65■□□□□ 0.1
SCAF11-203ENST00000395453 GJD3Q8N144 294 aa15.65■□□□□ 0.1
SCAF11-203ENST00000395453 PPP1R13LQ8WUF5 828 aa15.65■□□□□ 0.1
SCAF11-203ENST00000395453 MRVI1Q9Y6F6 885 aa15.65■□□□□ 0.1
SCAF11-203ENST00000395453 POTEMA6NI47 508 aa15.64■□□□□ 0.09
SCAF11-203ENST00000395453 SH2B2O14492 632 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms