RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 GIMAP7Q8NHV1 300 aa15.77■□□□□ 0.11
CLIP2-203ENST00000395060 TBCKQ8TEA7 893 aa15.77■□□□□ 0.11
CLIP2-203ENST00000395060 HAUS2Q9NVX0 235 aa15.77■□□□□ 0.11
CLIP2-203ENST00000395060 FLT1P17948 1338 aa15.77■□□□□ 0.11
CLIP2-203ENST00000395060 SMCO2A6NFE2 343 aa15.77■□□□□ 0.11
CLIP2-203ENST00000395060 PHF20L1A8MW92 1017 aa15.77■□□□□ 0.11
CLIP2-203ENST00000395060 RPSAP08865 295 aaKnown RBP15.77■□□□□ 0.11
CLIP2-203ENST00000395060 CTNNA1P35221 906 aaKnown RBP15.77■□□□□ 0.11
CLIP2-203ENST00000395060 PDE6BP35913 854 aa15.77■□□□□ 0.11
CLIP2-203ENST00000395060 MDM1Q8TC05 714 aa15.77■□□□□ 0.11
CLIP2-203ENST00000395060 ATP6V1G3Q96LB4 118 aa15.77■□□□□ 0.11
CLIP2-203ENST00000395060 FGFBP2Q9BYJ0 223 aa15.77■□□□□ 0.11
CLIP2-203ENST00000395060 CRNKL1Q9BZJ0 848 aaKnown RBP15.77■□□□□ 0.11
CLIP2-203ENST00000395060 TLR2O60603 784 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 ACTN1P12814 892 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 COPB2P35606 906 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 CDR1P51861 262 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 EIF6P56537 245 aaKnown RBP15.76■□□□□ 0.11
CLIP2-203ENST00000395060 SKOR1P84550 965 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 CNNM4Q6P4Q7 775 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 CCDC121Q6ZUS5 278 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 SV2BQ7L1I2 683 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 KCNK18Q7Z418 384 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 BAP1Q92560 729 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 CALML4Q96GE6 196 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 FAM84BQ96KN1 310 aaPredicted RBP15.76■□□□□ 0.11
CLIP2-203ENST00000395060 HGSO14964 777 aaPredicted RBP15.76■□□□□ 0.11
CLIP2-203ENST00000395060 SCP2P22307 547 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 DIXDC1Q155Q3 683 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 TBC1D31Q96DN5 1066 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 KLC4Q9NSK0 619 aa15.76■□□□□ 0.11
CLIP2-203ENST00000395060 NOVA2Q9UNW9 492 aaKnown RBP15.76■□□□□ 0.11
CLIP2-203ENST00000395060 ITGB4P16144 1822 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 COL1A1P02452 1464 aaPredicted RBP15.75■□□□□ 0.11
CLIP2-203ENST00000395060 ABCA3Q99758 1704 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 MARCH6O60337 910 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 ERVK-9P63128 1117 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 MAN2A1Q16706 1144 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 PDXDC1Q6P996 788 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 CELF1Q92879 486 aaKnown RBP15.75■□□□□ 0.11
CLIP2-203ENST00000395060 CAVIN3Q969G5 261 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 CYFIP2Q96F07 1278 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 C8orf37Q96NL8 207 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 MMTAG2Q9BU76 263 aaKnown RBP15.75■□□□□ 0.11
CLIP2-203ENST00000395060 BRIP1Q9BX63 1249 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 CELF4Q9BZC1 486 aaKnown RBP15.75■□□□□ 0.11
CLIP2-203ENST00000395060 CCSER1Q9C0I3 900 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 NEUROG2Q9H2A3 272 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 PAPPAQ13219 1627 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 NPHP3-ACAD11A0A0J9YXS1 232 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 KLRF2D3W0D1 207 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 KCNMA1Q12791 1236 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 FAM83BQ5T0W9 1011 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 SFMBT2Q5VUG0 894 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 TMED8Q6PL24 325 aaPredicted RBP15.75■□□□□ 0.11
CLIP2-203ENST00000395060 TAF4BQ92750 862 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 ZKSCAN4Q969J2 545 aaPredicted RBP15.75■□□□□ 0.11
CLIP2-203ENST00000395060 NSUN4Q96CB9 384 aaKnown RBP15.75■□□□□ 0.11
CLIP2-203ENST00000395060 MTA3Q9BTC8 594 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 SLC40A1Q9NP59 571 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 MAD2L2Q9UI95 211 aa15.75■□□□□ 0.11
CLIP2-203ENST00000395060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLIP2-203ENST00000395060 TLDC2A0PJX2 215 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 STXBP3O00186 592 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 RAD21O60216 631 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 TDP2O95551 362 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 NTSR2O95665 410 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 EPS15P42566 896 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 PRPF4BQ13523 1007 aaKnown RBP15.74■□□□□ 0.11
CLIP2-203ENST00000395060 SLC9C1Q4G0N8 1177 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 KDM7AQ6ZMT4 941 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 GCOM1H8Y6P7 765 aaPredicted RBP15.74■□□□□ 0.11
CLIP2-203ENST00000395060 MYZAPP0CAP1 466 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 HSD17B3P37058 310 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 KLHL30Q0D2K2 578 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 HGSNATQ68CP4 663 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 ZSCAN29Q8IWY8 852 aaPredicted RBP15.74■□□□□ 0.11
CLIP2-203ENST00000395060 N4BP2L2Q92802 583 aaPredicted RBP15.74■□□□□ 0.11
CLIP2-203ENST00000395060 COA7Q96BR5 231 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 GPR101Q96P66 508 aaPredicted RBP15.74■□□□□ 0.11
CLIP2-203ENST00000395060 GOPCQ9HD26 462 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 AMACRQ9UHK6 382 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 GGT7Q9UJ14 662 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 FRMPD2Q68DX3 1309 aaPredicted RBP15.74■□□□□ 0.11
CLIP2-203ENST00000395060 ITGA4P13612 1032 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 MKRN4PQ13434 485 aaPredicted RBP15.74■□□□□ 0.11
CLIP2-203ENST00000395060 SWT1Q5T5J6 900 aaKnown RBP15.74■□□□□ 0.11
CLIP2-203ENST00000395060 MICALCLQ6ZW33 695 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 TXNRD3Q86VQ6 643 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 DZIP1Q86YF9 867 aaKnown RBP15.74■□□□□ 0.11
CLIP2-203ENST00000395060 MAPKAPK5Q8IW41 473 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 SNX29Q8TEQ0 813 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 DDX12PQ92771 950 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 SRP68Q9UHB9 627 aaKnown RBP15.74■□□□□ 0.11
CLIP2-203ENST00000395060 SLIT2O94813 1529 aa15.74■□□□□ 0.11
CLIP2-203ENST00000395060 DAPK3O43293 454 aa15.73■□□□□ 0.11
CLIP2-203ENST00000395060 EPB41P11171 864 aaKnown RBP15.73■□□□□ 0.11
CLIP2-203ENST00000395060 AMPD3Q01432 767 aa15.73■□□□□ 0.11
CLIP2-203ENST00000395060 NONOQ15233 471 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLIP2-203ENST00000395060 ZNF662Q6ZS27 426 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms