RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 NFRKBQ6P4R8 1299 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 GPIHBP1Q8IV16 184 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 SPATA4Q8NEY3 305 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 MTMR9Q96QG7 549 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 PIGSQ96S52 555 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 OSBPL9Q96SU4 736 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 EYA3Q99504 573 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 PLEKHA4Q9H4M7 779 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 VAT1LQ9HCJ6 419 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 RSPH14Q9UHP6 348 aa20.34■□□□□ 0.85
PCDHA1-202ENST00000394633 LRRC53A6NM62 1247 aa20.33■□□□□ 0.85
PCDHA1-202ENST00000394633 CDK8P49336 464 aa20.33■□□□□ 0.85
PCDHA1-202ENST00000394633 GSTO1P78417 241 aa20.33■□□□□ 0.85
PCDHA1-202ENST00000394633 DYMQ7RTS9 669 aa20.33■□□□□ 0.85
PCDHA1-202ENST00000394633 DEF6Q9H4E7 631 aa20.33■□□□□ 0.85
PCDHA1-202ENST00000394633 STK17AQ9UEE5 414 aa20.33■□□□□ 0.85
PCDHA1-202ENST00000394633 PVALEFA0A1B0GWK0 134 aa20.33■□□□□ 0.84
PCDHA1-202ENST00000394633 GOLGA6BA6NDN3 693 aa20.33■□□□□ 0.84
PCDHA1-202ENST00000394633 AKR1B10O60218 316 aa20.33■□□□□ 0.84
PCDHA1-202ENST00000394633 ORC2Q13416 577 aaPredicted RBP20.33■□□□□ 0.84
PCDHA1-202ENST00000394633 RRAGAQ7L523 313 aa20.33■□□□□ 0.84
PCDHA1-202ENST00000394633 REXO1Q8N1G1 1221 aaKnown RBP20.33■□□□□ 0.84
PCDHA1-202ENST00000394633 GUF1Q8N442 669 aaKnown RBP20.33■□□□□ 0.84
PCDHA1-202ENST00000394633 BAP1Q92560 729 aa20.33■□□□□ 0.84
PCDHA1-202ENST00000394633 SEC63Q9UGP8 760 aaKnown RBP20.33■□□□□ 0.84
PCDHA1-202ENST00000394633 SALL4Q9UJQ4 1053 aa20.33■□□□□ 0.84
PCDHA1-202ENST00000394633 ABCB11O95342 1321 aa20.33■□□□□ 0.84
PCDHA1-202ENST00000394633 PPFIA4O75335 1185 aa20.32■□□□□ 0.84
PCDHA1-202ENST00000394633 C16orf86Q6ZW13 317 aa20.32■□□□□ 0.84
PCDHA1-202ENST00000394633 SND1Q7KZF4 910 aaKnown RBP eCLIP20.32■□□□□ 0.84
PCDHA1-202ENST00000394633 NEDD1Q8NHV4 660 aa20.32■□□□□ 0.84
PCDHA1-202ENST00000394633 C7orf43Q8WVR3 580 aa20.32■□□□□ 0.84
PCDHA1-202ENST00000394633 LARP4BQ92615 738 aaKnown RBP20.32■□□□□ 0.84
PCDHA1-202ENST00000394633 RTFDC1Q9BY42 306 aaPredicted RBP20.32■□□□□ 0.84
PCDHA1-202ENST00000394633 SMARCAL1Q9NZC9 954 aa20.32■□□□□ 0.84
PCDHA1-202ENST00000394633 EHD2Q9NZN4 543 aa20.32■□□□□ 0.84
PCDHA1-202ENST00000394633 HYOU1Q9Y4L1 999 aa20.32■□□□□ 0.84
PCDHA1-202ENST00000394633 KIF13BQ9NQT8 1826 aa20.32■□□□□ 0.84
PCDHA1-202ENST00000394633 CXCR5P32302 372 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 MRPS25P82663 173 aaKnown RBP20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 ATP2B2Q01814 1243 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 CALCRLQ16602 461 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 LRRC55Q6ZSA7 311 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 RUBCNQ92622 972 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 PJA2O43164 708 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 SLC37A4O43826 429 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 EDIL3O43854 480 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 SHOX2O60902 331 aaPredicted RBP20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 TCP1P17987 556 aaKnown RBP20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 KCNA3P22001 575 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 MAGEA1P43355 309 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 FXR2P51116 673 aaKnown RBP eCLIP20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 SLC7A5Q01650 507 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 DOK7Q18PE1 504 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 CCDC84Q86UT8 332 aaPredicted RBP20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 CNKSR1Q969H4 720 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 ALS2CR12Q96Q35 445 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 PSMB7Q99436 277 aa20.31■□□□□ 0.84
PCDHA1-202ENST00000394633 ESYT2A0FGR8 921 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 NCK2O43639 380 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 FGFR1OPO95684 399 aaKnown RBP20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 DPEP1P16444 411 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 LRRC63Q05C16 580 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 ASTE1Q2TB18 679 aaPredicted RBP20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 PDXDC1Q6P996 788 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 FAM76AQ8TAV0 307 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 UBA5Q9GZZ9 404 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 ZNF287Q9HBT7 754 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 GOLGA6CA6NDK9 693 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 VGLL3A8MV65 326 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 GOLGA6DP0CG33 693 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 ERCC3P19447 782 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 SMARCA1P28370 1054 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 MATR3P43243 847 aaKnown RBP eCLIP20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 GLIS3Q8NEA6 775 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 RAD54LQ92698 747 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 CEP95Q96GE4 821 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 CDK5RAP3Q96JB5 506 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 NUDT12Q9BQG2 462 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 ZC3H12CQ9C0D7 883 aaKnown RBP20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 GOLGA6AQ9NYA3 693 aa20.3■□□□□ 0.84
PCDHA1-202ENST00000394633 POTEMA6NI47 508 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 C21orf2O43822 256 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 TDP2O95551 362 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 LDHCP07864 332 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 GFPT1Q06210 699 aaPredicted RBP20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 EHHADHQ08426 723 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 HAUS3Q68CZ6 603 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 CCDC155Q8N6L0 562 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 ANKRD13CQ8N6S4 541 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 USP17L5A8MUK1 530 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 BTDP43251 543 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 KCNMA1Q12791 1236 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 MFSD14BQ5SR56 506 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 KCNK18Q7Z418 384 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 MTMR8Q96EF0 704 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 MTFR1LQ9H019 292 aa20.29■□□□□ 0.84
PCDHA1-202ENST00000394633 SCN9AQ15858 1988 aa20.28■□□□□ 0.84
PCDHA1-202ENST00000394633 GTF2IP78347 998 aa20.28■□□□□ 0.84
PCDHA1-202ENST00000394633 MAPK8IP2Q13387 824 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms