RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 TTBK2Q6IQ55 1244 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 DPP8Q6V1X1 898 aaPredicted RBP17.22■□□□□ 0.35
PTBP1-204ENST00000394601 SEPT12Q8IYM1 358 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 RASSF8Q8NHQ8 419 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 LACRTQ9GZZ8 138 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 DNAJC18Q9H819 358 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 RIC8AQ9NPQ8 531 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 ATAD5Q96QE3 1844 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 A0A087WUV0 522 aaPredicted RBP17.22■□□□□ 0.35
PTBP1-204ENST00000394601 NEBLO76041 1014 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 ASIC1P78348 528 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 STIM1Q13586 685 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 PDIA5Q14554 519 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 CALCRLQ16602 461 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 SLF2Q8IX21 1173 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 FAM71BQ8TC56 605 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 ATF5Q9Y2D1 282 aaPredicted RBP17.22■□□□□ 0.35
PTBP1-204ENST00000394601 A0A1W2PQJ5 194 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 GOLGA6CA6NDK9 693 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 GOLGA6DP0CG33 693 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 HNRNPH3P31942 346 aaKnown RBP17.22■□□□□ 0.35
PTBP1-204ENST00000394601 EIF6P56537 245 aaKnown RBP17.22■□□□□ 0.35
PTBP1-204ENST00000394601 PICALMQ13492 652 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 PPP4R3AQ6IN85 833 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 APOBEC3HQ6NTF7 200 aaKnown RBP17.22■□□□□ 0.35
PTBP1-204ENST00000394601 SLC39A2Q9NP94 309 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 GOLGA6AQ9NYA3 693 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 SUGT1Q9Y2Z0 365 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 ATP6V0A2Q9Y487 856 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 MYO3BQ8WXR4 1341 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 SCN9AQ15858 1988 aa17.21■□□□□ 0.35
PTBP1-204ENST00000394601 SKAP2O75563 359 aaPredicted RBP17.21■□□□□ 0.35
PTBP1-204ENST00000394601 KIAA0754O94854 1291 aa17.21■□□□□ 0.35
PTBP1-204ENST00000394601 CDK17Q00537 523 aa17.21■□□□□ 0.35
PTBP1-204ENST00000394601 E2F5Q15329 346 aa17.21■□□□□ 0.35
PTBP1-204ENST00000394601 LRRC55Q6ZSA7 311 aa17.21■□□□□ 0.35
PTBP1-204ENST00000394601 UNC13DQ70J99 1090 aa17.21■□□□□ 0.35
PTBP1-204ENST00000394601 PSD3Q9NYI0 1048 aa17.21■□□□□ 0.35
PTBP1-204ENST00000394601 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.21■□□□□ 0.35
PTBP1-204ENST00000394601 SHTN1A0MZ66 631 aa17.21■□□□□ 0.35
PTBP1-204ENST00000394601 BICDL2A1A5D9 508 aa17.21■□□□□ 0.35
PTBP1-204ENST00000394601 RPSAP08865 295 aaKnown RBP17.21■□□□□ 0.35
PTBP1-204ENST00000394601 RETREG2Q8NC44 543 aa17.21■□□□□ 0.35
PTBP1-204ENST00000394601 GJA10Q969M2 543 aa17.21■□□□□ 0.35
PTBP1-204ENST00000394601 COA1Q9GZY4 146 aa17.21■□□□□ 0.35
PTBP1-204ENST00000394601 STK17AQ9UEE5 414 aa17.21■□□□□ 0.35
PTBP1-204ENST00000394601 PNMA6FA0A0J9YX94 578 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 NDUFAB1O14561 156 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 PPEF1O14829 653 aaPredicted RBP17.2■□□□□ 0.34
PTBP1-204ENST00000394601 ADCY7P51828 1080 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 WHAMMP3Q1A5X7 153 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 SOGA3Q5TF21 947 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 PAPD7Q5XG87 772 aaKnown RBP17.2■□□□□ 0.34
PTBP1-204ENST00000394601 ZFPM1Q8IX07 1006 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 PRPF38AQ8NAV1 312 aaKnown RBP17.2■□□□□ 0.34
PTBP1-204ENST00000394601 FAM76AQ8TAV0 307 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 RAD54LQ92698 747 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 DNAJC19Q96DA6 116 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 PVALEFA0A1B0GWK0 134 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 TTLL1O95922 423 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 CHRM1P11229 460 aaPredicted RBP17.2■□□□□ 0.34
PTBP1-204ENST00000394601 UBE2SQ16763 222 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 SHROOM1Q2M3G4 852 aaPredicted RBP17.2■□□□□ 0.34
PTBP1-204ENST00000394601 RPAINQ86UA6 219 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 LARP4BQ92615 738 aaKnown RBP17.2■□□□□ 0.34
PTBP1-204ENST00000394601 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 HAUS4Q9H6D7 363 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 NHEJ1Q9H9Q4 299 aaPredicted RBP17.2■□□□□ 0.34
PTBP1-204ENST00000394601 LRWD1Q9UFC0 647 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 DUSP10Q9Y6W6 482 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 C6orf229H3BNL8 230 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 ZBED6P86452 979 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 ZCWPW2Q504Y3 356 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 SLC27A3Q5K4L6 730 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 PPP1R18Q6NYC8 613 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 CDC42EP5Q6NZY7 148 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 GPCPD1Q9NPB8 672 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 MYO6Q9UM54 1294 aa17.2■□□□□ 0.34
PTBP1-204ENST00000394601 ATP1A1P05023 1023 aaKnown RBP17.19■□□□□ 0.34
PTBP1-204ENST00000394601 TBC1D8BQ0IIM8 1120 aa17.19■□□□□ 0.34
PTBP1-204ENST00000394601 NFIAQ12857 509 aa17.19■□□□□ 0.34
PTBP1-204ENST00000394601 PDCLQ13371 301 aa17.19■□□□□ 0.34
PTBP1-204ENST00000394601 SV2BQ7L1I2 683 aa17.19■□□□□ 0.34
PTBP1-204ENST00000394601 OTUD6BQ8N6M0 293 aa17.19■□□□□ 0.34
PTBP1-204ENST00000394601 SERPINB13Q9UIV8 391 aa17.19■□□□□ 0.34
PTBP1-204ENST00000394601 PCDHA2Q9Y5H9 948 aa17.19■□□□□ 0.34
PTBP1-204ENST00000394601 RIMBP2O15034 1052 aa17.19■□□□□ 0.34
PTBP1-204ENST00000394601 PLEKP08567 350 aaPredicted RBP17.19■□□□□ 0.34
PTBP1-204ENST00000394601 HYIQ5T013 277 aa17.19■□□□□ 0.34
PTBP1-204ENST00000394601 P2RX7Q99572 595 aaKnown RBP17.19■□□□□ 0.34
PTBP1-204ENST00000394601 AMPD3Q01432 767 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 GUF1Q8N442 669 aaKnown RBP17.18■□□□□ 0.34
PTBP1-204ENST00000394601 RUFY1Q96T51 708 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 NUP58Q9BVL2 599 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 FGFBP2Q9BYJ0 223 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 JADE2Q9NQC1 790 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 AFF2P51816 1311 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 BACH1O14867 736 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 PPP1R2P41236 205 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 SLC7A5Q01650 507 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms