RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 USP17L17D6RBQ6 530 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 USP17L19D6RCP7 530 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 USP17L20D6RJB6 530 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 AKR1B1P15121 316 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 CNGA1P29973 690 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 RASSF7Q02833 373 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 USP17L24Q0WX57 530 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 UAP1Q16222 522 aaPredicted RBP18.16■□□□□ 0.5
SCN3B-202ENST00000392770 TCP11X2Q5H9J9 407 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 USP17L6PQ6QN14 398 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 CACTINQ8WUQ7 758 aaKnown RBP18.16■□□□□ 0.5
SCN3B-202ENST00000392770 CDHR1Q96JP9 859 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 ADPGKQ9BRR6 497 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 PABPN1LA6NDY0 278 aaKnown RBP18.16■□□□□ 0.5
SCN3B-202ENST00000392770 POTEMA6NI47 508 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 TMOD1P28289 359 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 ETF1P62495 437 aaKnown RBP18.16■□□□□ 0.5
SCN3B-202ENST00000392770 PSAPP07602 524 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 YARSP54577 528 aaKnown RBP18.16■□□□□ 0.5
SCN3B-202ENST00000392770 FKBP3Q00688 224 aaKnown RBP18.16■□□□□ 0.5
SCN3B-202ENST00000392770 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 AFAP1L1Q8TED9 768 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 PARVGQ9HBI0 331 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 FAM169AQ9Y6X4 670 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 TMEM191BP0C7N4 346 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 SLC7A3Q8WY07 619 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 MMS19Q96T76 1030 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 TMEM206Q9H813 350 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 ZHX1Q9UKY1 873 aaPredicted RBP18.15■□□□□ 0.5
SCN3B-202ENST00000392770 PRR29P0C7W0 189 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 HPDP32754 393 aaPredicted RBP18.15■□□□□ 0.5
SCN3B-202ENST00000392770 HACE1Q8IYU2 909 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 ANKS4BQ8N8V4 417 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 DAGLAQ9Y4D2 1042 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 MFAP3P55082 362 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 RPGRIP1Q96KN7 1286 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 CASP1P29466 404 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 BCL2L12Q9HB09 334 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 RAVER2Q9HCJ3 691 aaKnown RBP18.15■□□□□ 0.5
SCN3B-202ENST00000392770 EPB41L4AQ9HCS5 686 aaPredicted RBP18.15■□□□□ 0.5
SCN3B-202ENST00000392770 FLT1P17948 1338 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 EEPD1Q7L9B9 569 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 SRBD1Q8N5C6 995 aaKnown RBP18.15■□□□□ 0.5
SCN3B-202ENST00000392770 RETREG2Q8NC44 543 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 NEDD1Q8NHV4 660 aa18.15■□□□□ 0.5
SCN3B-202ENST00000392770 ATP1A3P13637 1013 aa18.14■□□□□ 0.5
SCN3B-202ENST00000392770 IGDCC4Q8TDY8 1250 aa18.14■□□□□ 0.5
SCN3B-202ENST00000392770 IPO4Q8TEX9 1081 aaKnown RBP18.14■□□□□ 0.5
SCN3B-202ENST00000392770 ATP5DP30049 168 aa18.14■□□□□ 0.49
SCN3B-202ENST00000392770 ST7Q9NRC1 585 aa18.14■□□□□ 0.49
SCN3B-202ENST00000392770 GDAQ9Y2T3 454 aa18.14■□□□□ 0.49
SCN3B-202ENST00000392770 SOWAHDA6NJG2 315 aa18.14■□□□□ 0.49
SCN3B-202ENST00000392770 CCDC14Q49A88 953 aa18.14■□□□□ 0.49
SCN3B-202ENST00000392770 MRRFQ96E11 262 aaKnown RBP18.14■□□□□ 0.49
SCN3B-202ENST00000392770 MKRN3Q13064 507 aaKnown RBP18.14■□□□□ 0.49
SCN3B-202ENST00000392770 MTERF2Q49AM1 385 aa18.14■□□□□ 0.49
SCN3B-202ENST00000392770 MAIP1Q8WWC4 291 aa18.14■□□□□ 0.49
SCN3B-202ENST00000392770 SSX2IPQ9Y2D8 614 aa18.14■□□□□ 0.49
SCN3B-202ENST00000392770 STAM2O75886 525 aa18.14■□□□□ 0.49
SCN3B-202ENST00000392770 AKT3Q9Y243 479 aa18.14■□□□□ 0.49
SCN3B-202ENST00000392770 ABCB11O95342 1321 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 CPLX4Q7Z7G2 160 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 RAD54LQ92698 747 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 BZW2Q9Y6E2 419 aaKnown RBP18.13■□□□□ 0.49
SCN3B-202ENST00000392770 A0A0G2JLW4 131 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 FERP16591 822 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 KIF22Q14807 665 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 ARHGAP23Q9P227 1491 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 GOLGA6BA6NDN3 693 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 H2AFZP0C0S5 128 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 H2AFVQ71UI9 128 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 SND1Q7KZF4 910 aaKnown RBP eCLIP18.13■□□□□ 0.49
SCN3B-202ENST00000392770 WRNIP1Q96S55 665 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 DDIT3P35638 169 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 PPP1R21Q6ZMI0 780 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 CLEC17AQ6ZS10 378 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 NT5C1BQ96P26 610 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 BHMT2Q9H2M3 363 aa18.13■□□□□ 0.49
SCN3B-202ENST00000392770 KRIT1O00522 736 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 STK10O94804 968 aaKnown RBP18.12■□□□□ 0.49
SCN3B-202ENST00000392770 KRT31Q15323 416 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 FBXO33Q7Z6M2 555 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 ANKRD13CQ8N6S4 541 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 TSC1Q92574 1164 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 KAZALD1Q96I82 304 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 ATF7P17544 494 aaPredicted RBP18.12■□□□□ 0.49
SCN3B-202ENST00000392770 HOXA7P31268 230 aaPredicted RBP18.12■□□□□ 0.49
SCN3B-202ENST00000392770 SBK1Q52WX2 424 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 MED10Q9BTT4 135 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 LMNB1P20700 586 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 ERCC6LQ2NKX8 1250 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 MXD3Q9BW11 206 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 RAB20Q9NX57 234 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 QRICH1Q2TAL8 776 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 UNC13DQ70J99 1090 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 SESTD1Q86VW0 696 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 GCNT4Q9P109 453 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 ZHX2Q9Y6X8 837 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 NWD1Q149M9 1564 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 F5H6K3 240 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms