RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 G3BP2Q9UN86 482 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GABRQQ9UN88 632 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ADAMTS5Q9UNA0 930 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 POLIQ9UNA4 740 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CEP131Q9UPN4 1083 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TRIM33Q9UPN9 1127 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 AGAP1Q9UPQ3 857 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TBC1D2BQ9UPU7 963 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KCNH4Q9UQ05 1017 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MAPK8IP1Q9UQF2 711 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 INVSQ9Y283 1065 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 BTBD3Q9Y2F9 522 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NTNG1Q9Y2I2 539 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SIK3Q9Y2K2 1263 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FRMD4BQ9Y2L6 1034 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 HIF3AQ9Y2N7 669 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PTPN22Q9Y2R2 807 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 YBX2Q9Y2T7 364 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RAXQ9Y2V3 346 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 COG6Q9Y2V7 657 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MSRB2Q9Y3D2 182 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RTCBQ9Y3I0 505 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SH3BP1Q9Y3L3 701 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SIT1Q9Y3P8 196 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TSC22D4Q9Y3Q8 395 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 DYRK1BQ9Y463 629 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NR2E1Q9Y466 385 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CHST2Q9Y4C5 530 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 AMMECR1Q9Y4X0 333 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RNF114Q9Y508 228 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PPME1Q9Y570 386 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KCTD3Q9Y597 815 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CTDP1Q9Y5B0 961 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PCDHGA9Q9Y5G4 932 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PCDHGA8Q9Y5G5 932 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PCDHGA7Q9Y5G6 932 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PCDHGA6Q9Y5G7 932 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PCDHGA3Q9Y5H0 932 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PCDHGA2Q9Y5H1 932 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CD2APQ9Y5K6 639 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RAI2Q9Y5P3 530 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MAFBQ9Y5Q3 323 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CORINQ9Y5Q5 1042 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 DMRT1Q9Y5R6 373 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KLF2Q9Y5W3 355 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SNX11Q9Y5W9 270 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NPFFR2Q9Y5X5 522 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ACTL7BQ9Y614 415 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GPC6Q9Y625 555 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TACC3Q9Y6A5 838 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 EMILIN1Q9Y6C2 1016 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 STK24Q9Y6E0 443 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PARP3Q9Y6F1 533 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SNCAIPQ9Y6H5 919 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC4A7Q9Y6M7 1214 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 COX11Q9Y6N1 276 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CAPN6Q9Y6Q1 641 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 WASF2Q9Y6W5 498 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NAV2Q8IVL1 2488 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SPENQ96T58 3664 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ADGRB3O60242 1522 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ARHGEF40Q8TER5 1519 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 DMBT1Q9UGM3 2413 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 LAMA3Q16787 3333 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 COL2A1P02458 1487 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 COL6A5A8TX70 2615 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SETD2Q9BYW2 2564 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TNS2Q63HR2 1409 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PRAG1Q86YV5 1406 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF318Q5VUA4 2279 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SPTBN5Q9NRC6 3674 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 FASNP49327 2511 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 COL4A4P53420 1690 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 BRD4O60885 1362 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 METP08581 1390 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ZMYM3Q14202 1370 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 DHX57Q6P158 1386 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 AATKQ6ZMQ8 1374 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 USP31Q70CQ4 1352 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PHLDB1Q86UU1 1377 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 COL16A1Q07092 1604 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ABCA2Q9BZC7 2435 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF804BA4D1E1 1349 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 USP19O94966 1318 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 XDHP47989 1333 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CGNL1Q0VF96 1302 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 TTBK1Q5TCY1 1321 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 KDM2BQ8NHM5 1336 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ADGRA2Q96PE1 1338 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF541Q9H0D2 1346 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ACIN1Q9UKV3 1341 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ZC3H4Q9UPT8 1303 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 TRIOBPQ9H2D6 2365 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SPATA31D1Q6ZQQ2 1576 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 HELZ2Q9BYK8 2649 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MEGF8Q7Z7M0 2845 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SVEP1Q4LDE5 3571 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 TMEM265A0A087WTH1 108 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CYP3A7-CYP3A51PA0A087WV96 503 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A087WZ62 844 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms