RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 IFIT1BQ5T764 474 aaKnown RBP18.6■□□□□ 0.57
VCX3A-201ENST00000381089 TMCO2Q7Z6W1 182 aaPredicted RBP18.6■□□□□ 0.57
VCX3A-201ENST00000381089 SPATA33Q96N06 139 aa18.6■□□□□ 0.57
VCX3A-201ENST00000381089 DSCC1Q9BVC3 393 aa18.6■□□□□ 0.57
VCX3A-201ENST00000381089 RWDD1Q9H446 243 aaPredicted RBP18.6■□□□□ 0.57
VCX3A-201ENST00000381089 ZSWIM5Q9P217 1185 aa18.6■□□□□ 0.57
VCX3A-201ENST00000381089 PTPRSQ13332 1948 aa18.6■□□□□ 0.57
VCX3A-201ENST00000381089 HAS3O00219 553 aa18.59■□□□□ 0.57
VCX3A-201ENST00000381089 LGR5O75473 907 aa18.59■□□□□ 0.57
VCX3A-201ENST00000381089 AMHP03971 560 aa18.59■□□□□ 0.57
VCX3A-201ENST00000381089 TMEM31Q5JXX7 168 aa18.59■□□□□ 0.57
VCX3A-201ENST00000381089 ZNF618Q5T7W0 954 aa18.59■□□□□ 0.57
VCX3A-201ENST00000381089 INSL6Q9Y581 213 aa18.59■□□□□ 0.57
VCX3A-201ENST00000381089 LINC01553A4QN01 128 aa18.58■□□□□ 0.56
VCX3A-201ENST00000381089 ZBTB5O15062 677 aa18.58■□□□□ 0.56
VCX3A-201ENST00000381089 TGFB3P10600 412 aa18.58■□□□□ 0.56
VCX3A-201ENST00000381089 GHRHRQ02643 423 aa18.58■□□□□ 0.56
VCX3A-201ENST00000381089 CELF3Q5SZQ8 465 aaKnown RBP18.58■□□□□ 0.56
VCX3A-201ENST00000381089 MYSM1Q5VVJ2 828 aa18.58■□□□□ 0.56
VCX3A-201ENST00000381089 B4GALNT3Q6L9W6 998 aa18.58■□□□□ 0.56
VCX3A-201ENST00000381089 FAM117BQ6P1L5 589 aa18.58■□□□□ 0.56
VCX3A-201ENST00000381089 SPRED2Q7Z698 418 aa18.58■□□□□ 0.56
VCX3A-201ENST00000381089 PDCD2LQ9BRP1 358 aa18.58■□□□□ 0.56
VCX3A-201ENST00000381089 OSBPL3Q9H4L5 887 aa18.58■□□□□ 0.56
VCX3A-201ENST00000381089 SUGCTQ9HAC7 445 aa18.58■□□□□ 0.56
VCX3A-201ENST00000381089 ARIH1Q9Y4X5 557 aaPredicted RBP18.58■□□□□ 0.56
VCX3A-201ENST00000381089 PCDHA1Q9Y5I3 950 aa18.58■□□□□ 0.56
VCX3A-201ENST00000381089 MYH7BA7E2Y1 1941 aa18.58■□□□□ 0.56
VCX3A-201ENST00000381089 RSPH10B2B2RC85 870 aa18.57■□□□□ 0.56
VCX3A-201ENST00000381089 KLRF2D3W0D1 207 aa18.57■□□□□ 0.56
VCX3A-201ENST00000381089 GGPS1O95749 300 aa18.57■□□□□ 0.56
VCX3A-201ENST00000381089 RSPH10BP0C881 870 aa18.57■□□□□ 0.56
VCX3A-201ENST00000381089 HOXD8P13378 290 aaPredicted RBP18.57■□□□□ 0.56
VCX3A-201ENST00000381089 CCND2P30279 289 aa18.57■□□□□ 0.56
VCX3A-201ENST00000381089 THPOP40225 353 aa18.57■□□□□ 0.56
VCX3A-201ENST00000381089 STOX1Q6ZVD7 989 aa18.57■□□□□ 0.56
VCX3A-201ENST00000381089 CHD1LQ86WJ1 897 aa18.57■□□□□ 0.56
VCX3A-201ENST00000381089 LRFN3Q9BTN0 628 aa18.57■□□□□ 0.56
VCX3A-201ENST00000381089 EPHX3Q9H6B9 360 aa18.57■□□□□ 0.56
VCX3A-201ENST00000381089 MLXIPQ9HAP2 919 aa18.57■□□□□ 0.56
VCX3A-201ENST00000381089 C17orf102A2RUQ5 167 aa18.56■□□□□ 0.56
VCX3A-201ENST00000381089 PTPROQ16827 1216 aa18.56■□□□□ 0.56
VCX3A-201ENST00000381089 TRIM71Q2Q1W2 868 aaKnown RBP18.56■□□□□ 0.56
VCX3A-201ENST00000381089 VSIG10LQ86VR7 867 aa18.56■□□□□ 0.56
VCX3A-201ENST00000381089 PLEKHM2Q8IWE5 1019 aa18.56■□□□□ 0.56
VCX3A-201ENST00000381089 SMC5Q8IY18 1101 aa18.56■□□□□ 0.56
VCX3A-201ENST00000381089 MYOCDQ8IZQ8 938 aa18.56■□□□□ 0.56
VCX3A-201ENST00000381089 FBXO22Q8NEZ5 403 aa18.56■□□□□ 0.56
VCX3A-201ENST00000381089 UBE2ZQ9H832 354 aaPredicted RBP18.56■□□□□ 0.56
VCX3A-201ENST00000381089 SIP14410 1827 aa18.56■□□□□ 0.56
VCX3A-201ENST00000381089 GCOM1H8Y6P7 765 aaPredicted RBP18.55■□□□□ 0.56
VCX3A-201ENST00000381089 POLR2MP0CAP2 368 aa18.55■□□□□ 0.56
VCX3A-201ENST00000381089 ZNF200P98182 395 aaPredicted RBP18.55■□□□□ 0.56
VCX3A-201ENST00000381089 TRDNQ13061 729 aa18.55■□□□□ 0.56
VCX3A-201ENST00000381089 PGM5Q15124 567 aa18.55■□□□□ 0.56
VCX3A-201ENST00000381089 HSDL1Q3SXM5 330 aa18.55■□□□□ 0.56
VCX3A-201ENST00000381089 GNPTABQ3T906 1256 aa18.55■□□□□ 0.56
VCX3A-201ENST00000381089 TRAF7Q6Q0C0 670 aa18.55■□□□□ 0.56
VCX3A-201ENST00000381089 SERINC5Q86VE9 423 aa18.55■□□□□ 0.56
VCX3A-201ENST00000381089 STAG2Q8N3U4 1231 aa18.55■□□□□ 0.56
VCX3A-201ENST00000381089 ATP6V0A1Q93050 837 aa18.55■□□□□ 0.56
VCX3A-201ENST00000381089 SAMD11Q96NU1 681 aa18.55■□□□□ 0.56
VCX3A-201ENST00000381089 BRWD1Q9NSI6 2320 aa18.54■□□□□ 0.56
VCX3A-201ENST00000381089 NOP56O00567 594 aaKnown RBP18.54■□□□□ 0.56
VCX3A-201ENST00000381089 OPLAHO14841 1288 aa18.54■□□□□ 0.56
VCX3A-201ENST00000381089 SORBS3O60504 671 aa18.54■□□□□ 0.56
VCX3A-201ENST00000381089 CAND2O75155 1236 aa18.54■□□□□ 0.56
VCX3A-201ENST00000381089 UBA1P22314 1058 aaKnown RBP18.54■□□□□ 0.56
VCX3A-201ENST00000381089 HOXA13P31271 388 aaPredicted RBP18.54■□□□□ 0.56
VCX3A-201ENST00000381089 MBTPS1Q14703 1052 aa18.54■□□□□ 0.56
VCX3A-201ENST00000381089 TCTN1Q2MV58 587 aa18.54■□□□□ 0.56
VCX3A-201ENST00000381089 HOMER1Q86YM7 354 aa18.54■□□□□ 0.56
VCX3A-201ENST00000381089 DBF4BQ8NFT6 615 aa18.54■□□□□ 0.56
VCX3A-201ENST00000381089 SEPT8Q92599 483 aa18.54■□□□□ 0.56
VCX3A-201ENST00000381089 WNT8BQ93098 351 aa18.54■□□□□ 0.56
VCX3A-201ENST00000381089 MTMR8Q96EF0 704 aa18.54■□□□□ 0.56
VCX3A-201ENST00000381089 ERICH2A1L162 156 aa18.53■□□□□ 0.56
VCX3A-201ENST00000381089 H3BRB1 525 aa18.53■□□□□ 0.56
VCX3A-201ENST00000381089 GPR37L1O60883 481 aa18.53■□□□□ 0.56
VCX3A-201ENST00000381089 RGS20O76081 388 aa18.53■□□□□ 0.56
VCX3A-201ENST00000381089 GNAT1P11488 350 aa18.53■□□□□ 0.56
VCX3A-201ENST00000381089 KCNA5P22460 613 aa18.53■□□□□ 0.56
VCX3A-201ENST00000381089 NUCB1Q02818 461 aa18.53■□□□□ 0.56
VCX3A-201ENST00000381089 PUS10Q3MIT2 529 aaKnown RBP18.53■□□□□ 0.56
VCX3A-201ENST00000381089 LEXMQ3ZCV2 418 aa18.53■□□□□ 0.56
VCX3A-201ENST00000381089 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.53■□□□□ 0.56
VCX3A-201ENST00000381089 YME1L1Q96TA2 773 aa18.53■□□□□ 0.56
VCX3A-201ENST00000381089 C16orf70Q9BSU1 422 aa18.53■□□□□ 0.56
VCX3A-201ENST00000381089 TUT1Q9H6E5 874 aaKnown RBP18.53■□□□□ 0.56
VCX3A-201ENST00000381089 MAD2L2Q9UI95 211 aa18.53■□□□□ 0.56
VCX3A-201ENST00000381089 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.52■□□□□ 0.56
VCX3A-201ENST00000381089 PALM3A6NDB9 673 aaPredicted RBP18.52■□□□□ 0.56
VCX3A-201ENST00000381089 STAM2O75886 525 aa18.52■□□□□ 0.56
VCX3A-201ENST00000381089 HTRA4P83105 476 aaPredicted RBP18.52■□□□□ 0.56
VCX3A-201ENST00000381089 NEDD9Q14511 834 aa18.52■□□□□ 0.56
VCX3A-201ENST00000381089 TIGD5Q53EQ6 642 aa18.52■□□□□ 0.56
VCX3A-201ENST00000381089 PLEKHG4Q58EX7 1191 aa18.52■□□□□ 0.56
VCX3A-201ENST00000381089 FCHSD1Q86WN1 690 aa18.52■□□□□ 0.56
VCX3A-201ENST00000381089 MRPL38Q96DV4 380 aaKnown RBP18.52■□□□□ 0.56
VCX3A-201ENST00000381089 C17orf80Q9BSJ5 609 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms