RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 ATP8B1O43520 1251 aa12.9□□□□□ -0.34
PITRM1-202ENST00000380989 MAGEA9P43362 315 aa12.9□□□□□ -0.34
PITRM1-202ENST00000380989 NOSTRINQ8IVI9 506 aa12.9□□□□□ -0.34
PITRM1-202ENST00000380989 SH2D3CQ8N5H7 860 aa12.9□□□□□ -0.34
PITRM1-202ENST00000380989 SMCHD1A6NHR9 2005 aa12.9□□□□□ -0.34
PITRM1-202ENST00000380989 SSC5DA1L4H1 1573 aa12.9□□□□□ -0.34
PITRM1-202ENST00000380989 MACROD2A1Z1Q3 448 aa12.9□□□□□ -0.34
PITRM1-202ENST00000380989 STXBP3O00186 592 aa12.9□□□□□ -0.34
PITRM1-202ENST00000380989 ACTN4O43707 911 aaKnown RBP12.9□□□□□ -0.34
PITRM1-202ENST00000380989 PIK3AP1Q6ZUJ8 805 aa12.9□□□□□ -0.34
PITRM1-202ENST00000380989 RAB21Q9UL25 225 aa12.9□□□□□ -0.34
PITRM1-202ENST00000380989 COL2A1P02458 1487 aaPredicted RBP12.9□□□□□ -0.35
PITRM1-202ENST00000380989 SYNRGQ9UMZ2 1314 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 ATP1A2P50993 1020 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 MKL1Q969V6 931 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 ADD3Q9UEY8 706 aaKnown RBP12.89□□□□□ -0.35
PITRM1-202ENST00000380989 HOOK1Q9UJC3 728 aaKnown RBP12.89□□□□□ -0.35
PITRM1-202ENST00000380989 AGPSO00116 658 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 N4BP3O15049 544 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 EPHX2P34913 555 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 ZNF174Q15697 407 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 USH1GQ495M9 461 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 MSANTD4Q8NCY6 345 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 LACRTQ9GZZ8 138 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 TMEM260Q9NX78 707 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 MYO6Q9UM54 1294 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 GDAQ9Y2T3 454 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 TRIM75PA6NK02 468 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 TBC1D12O60347 775 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 PPP6R2O75170 966 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 KRT9P35527 623 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 NAPAP54920 295 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 CORO7P57737 925 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 SAFBQ15424 915 aaKnown RBP eCLIP12.89□□□□□ -0.35
PITRM1-202ENST00000380989 KRT26Q7Z3Y9 468 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 PROCA1Q8NCQ7 364 aaPredicted RBP12.89□□□□□ -0.35
PITRM1-202ENST00000380989 UIMC1Q96RL1 719 aa12.89□□□□□ -0.35
PITRM1-202ENST00000380989 NAPGQ99747 312 aaPredicted RBP12.89□□□□□ -0.35
PITRM1-202ENST00000380989 MYO1FO00160 1098 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 BACH1O14867 736 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 KRT2P35908 639 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 ASPRV1Q53RT3 343 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 FCHSD1Q86WN1 690 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 ENOX1Q8TC92 643 aaKnown RBP12.88□□□□□ -0.35
PITRM1-202ENST00000380989 SPZ1Q9BXG8 430 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 FAM107BQ9H098 131 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 RIOX1Q9H6W3 641 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 EFCC1Q9HA90 598 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 SEC63Q9UGP8 760 aaKnown RBP12.88□□□□□ -0.35
PITRM1-202ENST00000380989 MYH10P35580 1976 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 GLTPD2A6NH11 291 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 PRPF6O94906 941 aaKnown RBP12.88□□□□□ -0.35
PITRM1-202ENST00000380989 GNAQP50148 359 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 MTMR2Q13614 643 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 KRT31Q15323 416 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 AFAP1L1Q8TED9 768 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 SYMPKQ92797 1274 aaKnown RBP12.88□□□□□ -0.35
PITRM1-202ENST00000380989 BARHL2Q9NY43 387 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 BIN2Q9UBW5 565 aaPredicted RBP12.88□□□□□ -0.35
PITRM1-202ENST00000380989 HPCAL4Q9UM19 191 aa12.88□□□□□ -0.35
PITRM1-202ENST00000380989 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
PITRM1-202ENST00000380989 SARSP49591 514 aaKnown RBP12.87□□□□□ -0.35
PITRM1-202ENST00000380989 MAP3K10Q02779 954 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 SPP2Q13103 211 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 UBE2SQ16763 222 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 MAP9Q49MG5 647 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 APOBEC3FQ8IUX4 373 aaKnown RBP12.87□□□□□ -0.35
PITRM1-202ENST00000380989 DCPSQ96C86 337 aaKnown RBP12.87□□□□□ -0.35
PITRM1-202ENST00000380989 ARHGEF10LQ9HCE6 1279 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 ABHD10Q9NUJ1 306 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 PSD3Q9NYI0 1048 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 ZSCAN5CA6NGD5 496 aaPredicted RBP12.87□□□□□ -0.35
PITRM1-202ENST00000380989 BMP3P12645 472 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 PMS1P54277 932 aaKnown RBP12.87□□□□□ -0.35
PITRM1-202ENST00000380989 PTPROQ16827 1216 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 KCNV1Q6PIU1 500 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 CEP112Q8N8E3 955 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 JMYQ8N9B5 988 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 TMX2Q9Y320 296 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 ATAD5Q96QE3 1844 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 SMCO2A6NFE2 343 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 TRAF5O00463 557 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 ASNSP08243 561 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 PLEKP08567 350 aaPredicted RBP12.87□□□□□ -0.35
PITRM1-202ENST00000380989 XBP1P17861 261 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 QRICH1Q2TAL8 776 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 MAP1SQ66K74 1059 aaPredicted RBP12.87□□□□□ -0.35
PITRM1-202ENST00000380989 SULF1Q8IWU6 871 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 ANKRD13CQ8N6S4 541 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 SECISBP2LQ93073 1101 aaKnown RBP12.87□□□□□ -0.35
PITRM1-202ENST00000380989 ZNF408Q9H9D4 720 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 DMGDHQ9UI17 866 aaKnown RBP12.87□□□□□ -0.35
PITRM1-202ENST00000380989 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
PITRM1-202ENST00000380989 ESYT3A0FGR9 886 aa12.86□□□□□ -0.35
PITRM1-202ENST00000380989 ERLIN1O75477 346 aa12.86□□□□□ -0.35
PITRM1-202ENST00000380989 EIF3JO75822 258 aaKnown RBP12.86□□□□□ -0.35
PITRM1-202ENST00000380989 RNASE9P60153 205 aaKnown RBP12.86□□□□□ -0.35
PITRM1-202ENST00000380989 APBA1Q02410 837 aa12.86□□□□□ -0.35
PITRM1-202ENST00000380989 CUL4BQ13620 913 aa12.86□□□□□ -0.35
PITRM1-202ENST00000380989 CCDC174Q6PII3 467 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms