RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 TNNC2P02585 160 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 ATP1A3P13637 1013 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 CAV1Q03135 178 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 PPP4R3CPQ6ZMV5 832 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 CCDC124Q96CT7 223 aaKnown RBP18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 ATP6V1G3Q96LB4 118 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 ZNF277Q9NRM2 450 aaPredicted RBP18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 MYCNP04198 464 aaPredicted RBP18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 LIG4P49917 911 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 RFX6Q8HWS3 928 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 AZI2Q9H6S1 392 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 BEND6Q5SZJ8 279 aaPredicted RBP18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 NLRX1Q86UT6 975 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 TBC1D22AQ8WUA7 517 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 H7C0C1 242 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 ACTN1P12814 892 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 ECE1P42892 770 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 ATP5OP48047 213 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 GRAMD4Q6IC98 578 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 TRIM55Q9BYV6 548 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 SH2B2O14492 632 aaPredicted RBP18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 ZBED4O75132 1171 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 CPP00450 1065 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 RWDD2BP57060 319 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 RHOT2Q8IXI1 618 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 SRRM1Q8IYB3 904 aaKnown RBP18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 TGFBRAP1Q8WUH2 860 aa18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 PRPF31Q8WWY3 499 aaKnown RBP18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 GPKOWQ92917 476 aaPredicted RBP eCLIP18.49■□□□□ 0.552e-6■■■■■ 30.4
COL4A3BP-203ENST00000380494 MRPL47Q9HD33 250 aaKnown RBP18.49■□□□□ 0.55
COL4A3BP-203ENST00000380494 USP17L12C9JPN9 530 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 KLRF2D3W0D1 207 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 USP17L21D6R901 530 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 LARGE1O95461 756 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 PLS3P13797 630 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 PRPSAP1Q14558 356 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 DDB1Q16531 1140 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 KRT26Q7Z3Y9 468 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 RAB44Q7Z6P3 723 aaPredicted RBP18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 ZNF579Q8NAF0 562 aaKnown RBP18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 PIP4K2CQ8TBX8 421 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 TEKT3Q9BXF9 490 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 FTOQ9C0B1 505 aaKnown RBP eCLIP18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 NDST4Q9H3R1 872 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 GYG2O15488 501 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 ARL6IP4Q66PJ3 421 aaKnown RBP18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 CYP4F22Q6NT55 531 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 KIFC3Q9BVG8 833 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 NECTIN1Q15223 517 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 PTPN21Q16825 1174 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 TTBK2Q6IQ55 1244 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 CFBP00751 764 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 MKRN3Q13064 507 aaKnown RBP18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 TAF12Q16514 161 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 SCYL2Q6P3W7 929 aa18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 PROCA1Q8NCQ7 364 aaPredicted RBP18.48■□□□□ 0.55
COL4A3BP-203ENST00000380494 AATKQ6ZMQ8 1374 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 RIMBP2O15034 1052 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 COBLO75128 1261 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 CDC37Q16543 378 aaPredicted RBP18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 MAPKAPK5Q8IW41 473 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 GRAMD1CQ8IYS0 662 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 ACSBG1Q96GR2 724 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 ECT2Q9H8V3 914 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 GOLGA8CPA6NN73 597 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 PYGBP11216 843 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 TCIRG1Q13488 830 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 CENPUQ71F23 418 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 ZNF589Q86UQ0 364 aaPredicted RBP18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 FAM186BQ8IYM0 893 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 ZFP69BQ9UJL9 534 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 LOC102724159A0A0B4J2E5 919 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 ARHGAP10A1A4S6 786 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 FOSP01100 380 aaPredicted RBP18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 MCF2P10911 925 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 GCFC2P16383 781 aaKnown RBP18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 IFNAR1P17181 557 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 PWP2Q15269 919 aaKnown RBP18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 DACT3Q96B18 629 aaPredicted RBP18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 GRAMD1AQ96CP6 724 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 FGD4Q96M96 766 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 RIOK1Q9BRS2 568 aaKnown RBP18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 ANLNQ9NQW6 1124 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 SYNGAP1Q96PV0 1343 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 MCF2LO15068 1137 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 DMP1Q13316 513 aaPredicted RBP18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 ART3Q13508 389 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 CNPY4Q8N129 248 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 TEX9Q8N6V9 391 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 HDAC11Q96DB2 347 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 AP1M1Q9BXS5 423 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 MDM2Q00987 491 aaPredicted RBP18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 DHX40Q8IX18 779 aaKnown RBP18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 COG1Q8WTW3 980 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 SUFUQ9UMX1 484 aa18.47■□□□□ 0.55
COL4A3BP-203ENST00000380494 M0R2C6 588 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 PIK3CAP42336 1068 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 SNX1Q13596 522 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 CCDC144BQ3MJ40 725 aa18.46■□□□□ 0.55
COL4A3BP-203ENST00000380494 A0A087WWV3 80 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms