RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 FOXP1Q9H334 677 aaPredicted RBP13.58□□□□□ -0.24
PCNA-201ENST00000379143 JADE2Q9NQC1 790 aa13.58□□□□□ -0.24
PCNA-201ENST00000379143 RTEL1Q9NZ71 1219 aa13.58□□□□□ -0.24
PCNA-201ENST00000379143 GNEQ9Y223 722 aaKnown RBP13.58□□□□□ -0.24
PCNA-201ENST00000379143 UBIAD1Q9Y5Z9 338 aa13.58□□□□□ -0.24
PCNA-201ENST00000379143 FRMPD3Q5JV73 1810 aa13.57□□□□□ -0.24
PCNA-201ENST00000379143 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.57□□□□□ -0.24
PCNA-201ENST00000379143 BTBD18B2RXH4 712 aa13.57□□□□□ -0.24
PCNA-201ENST00000379143 H3BQV1 296 aa13.57□□□□□ -0.24
PCNA-201ENST00000379143 SMPD1P17405 629 aa13.57□□□□□ -0.24
PCNA-201ENST00000379143 ITGB5P18084 799 aa13.57□□□□□ -0.24
PCNA-201ENST00000379143 EN2P19622 333 aaPredicted RBP13.57□□□□□ -0.24
PCNA-201ENST00000379143 CIITAP33076 1130 aa13.57□□□□□ -0.24
PCNA-201ENST00000379143 FOSBP53539 338 aa13.57□□□□□ -0.24
PCNA-201ENST00000379143 SETQ01105 290 aaPredicted RBP13.57□□□□□ -0.24
PCNA-201ENST00000379143 GUCY1B3Q02153 619 aa13.57□□□□□ -0.24
PCNA-201ENST00000379143 GNL2Q13823 731 aaKnown RBP13.57□□□□□ -0.24
PCNA-201ENST00000379143 CEP55Q53EZ4 464 aa13.57□□□□□ -0.24
PCNA-201ENST00000379143 LARP1BQ659C4 914 aaKnown RBP13.57□□□□□ -0.24
PCNA-201ENST00000379143 TLK2Q86UE8 772 aa13.57□□□□□ -0.24
PCNA-201ENST00000379143 GIMAP8Q8ND71 665 aaPredicted RBP13.57□□□□□ -0.24
PCNA-201ENST00000379143 TBCKQ8TEA7 893 aa13.57□□□□□ -0.24
PCNA-201ENST00000379143 MXRA8Q9BRK3 442 aa13.57□□□□□ -0.24
PCNA-201ENST00000379143 SPATA31C2B4DYI2 1134 aa13.56□□□□□ -0.24
PCNA-201ENST00000379143 GH1P01241 217 aa13.56□□□□□ -0.24
PCNA-201ENST00000379143 PDIA4P13667 645 aaKnown RBP13.56□□□□□ -0.24
PCNA-201ENST00000379143 GJA9P57773 515 aa13.56□□□□□ -0.24
PCNA-201ENST00000379143 NKX3-2P78367 333 aa13.56□□□□□ -0.24
PCNA-201ENST00000379143 NR5A1Q13285 461 aa13.56□□□□□ -0.24
PCNA-201ENST00000379143 NEDD9Q14511 834 aa13.56□□□□□ -0.24
PCNA-201ENST00000379143 BRDTQ58F21 947 aaPredicted RBP13.56□□□□□ -0.24
PCNA-201ENST00000379143 ANO1Q5XXA6 986 aa13.56□□□□□ -0.24
PCNA-201ENST00000379143 MOXD1Q6UVY6 613 aa13.56□□□□□ -0.24
PCNA-201ENST00000379143 NEK8Q86SG6 692 aa13.56□□□□□ -0.24
PCNA-201ENST00000379143 OXER1Q8TDS5 423 aa13.56□□□□□ -0.24
PCNA-201ENST00000379143 SENP7Q9BQF6 1050 aa13.56□□□□□ -0.24
PCNA-201ENST00000379143 UPF3AQ9H1J1 476 aaKnown RBP13.56□□□□□ -0.24
PCNA-201ENST00000379143 DDX41Q9UJV9 622 aaKnown RBP13.56□□□□□ -0.24
PCNA-201ENST00000379143 SYNRGQ9UMZ2 1314 aa13.56□□□□□ -0.24
PCNA-201ENST00000379143 MYH7BA7E2Y1 1941 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 KBTBD13C9JR72 458 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 DNM1LO00429 736 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 MEIS1O00470 390 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 DYNC1LI2O43237 492 aaPredicted RBP13.55□□□□□ -0.24
PCNA-201ENST00000379143 ADCY6O43306 1168 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 ADAMTS4O75173 837 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 ARIH2O95376 493 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 C6orf222P0C671 652 aaPredicted RBP13.55□□□□□ -0.24
PCNA-201ENST00000379143 GCFC2P16383 781 aaKnown RBP13.55□□□□□ -0.24
PCNA-201ENST00000379143 CST5P28325 142 aaPredicted RBP13.55□□□□□ -0.24
PCNA-201ENST00000379143 CPT1AP50416 773 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 LAMC2Q13753 1193 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 LY6KQ17RY6 165 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 INF2Q27J81 1249 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 PIK3AP1Q6ZUJ8 805 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 DHX37Q8IY37 1157 aaKnown RBP13.55□□□□□ -0.24
PCNA-201ENST00000379143 PCSK9Q8NBP7 692 aaKnown RBP13.55□□□□□ -0.24
PCNA-201ENST00000379143 OR6J1Q8NGC5 347 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 TNFRSF25Q93038 417 aa13.55□□□□□ -0.24
PCNA-201ENST00000379143 EMID1Q96A84 441 aaPredicted RBP13.55□□□□□ -0.24
PCNA-201ENST00000379143 ZFP91Q96JP5 570 aaPredicted RBP13.55□□□□□ -0.24
PCNA-201ENST00000379143 RANBP2P49792 3224 aaKnown RBP13.55□□□□□ -0.24
PCNA-201ENST00000379143 CYP3A7-CYP3A51PA0A087WV96 503 aa13.54□□□□□ -0.24
PCNA-201ENST00000379143 FAM86B1E9PN63 330 aa13.54□□□□□ -0.24
PCNA-201ENST00000379143 ZEB2O60315 1214 aa13.54□□□□□ -0.24
PCNA-201ENST00000379143 PGK1P00558 417 aa13.54□□□□□ -0.24
PCNA-201ENST00000379143 FAM86B2P0C5J1 330 aa13.54□□□□□ -0.24
PCNA-201ENST00000379143 UBA1P22314 1058 aaKnown RBP13.54□□□□□ -0.24
PCNA-201ENST00000379143 CYP3A7P24462 503 aa13.54□□□□□ -0.24
PCNA-201ENST00000379143 U2AF2P26368 475 aaKnown RBP eCLIP13.54□□□□□ -0.248e-20■■■■■ 27.8
PCNA-201ENST00000379143 LRRC41Q15345 812 aa13.54□□□□□ -0.24
PCNA-201ENST00000379143 GNASQ5JWF2 1037 aa13.54□□□□□ -0.24
PCNA-201ENST00000379143 PPP4R3AQ6IN85 833 aa13.54□□□□□ -0.24
PCNA-201ENST00000379143 PLA2G4DQ86XP0 818 aa13.54□□□□□ -0.24
PCNA-201ENST00000379143 NOSTRINQ8IVI9 506 aa13.54□□□□□ -0.24
PCNA-201ENST00000379143 KLHDC9Q8NEP7 349 aa13.54□□□□□ -0.24
PCNA-201ENST00000379143 LENG1Q96BZ8 264 aaPredicted RBP13.54□□□□□ -0.24
PCNA-201ENST00000379143 TSEN34Q9BSV6 310 aaKnown RBP13.54□□□□□ -0.24
PCNA-201ENST00000379143 KCNH7Q9NS40 1196 aa13.54□□□□□ -0.24
PCNA-201ENST00000379143 COLQQ9Y215 455 aaPredicted RBP13.54□□□□□ -0.24
PCNA-201ENST00000379143 TRIOBPQ9H2D6 2365 aa13.53□□□□□ -0.24
PCNA-201ENST00000379143 IGLV3-22A0A075B6J6 115 aa13.53□□□□□ -0.24
PCNA-201ENST00000379143 MOXD2PA6NHM9 499 aa13.53□□□□□ -0.24
PCNA-201ENST00000379143 GGPS1O95749 300 aa13.53□□□□□ -0.24
PCNA-201ENST00000379143 ARHGAP1Q07960 439 aa13.53□□□□□ -0.24
PCNA-201ENST00000379143 SEMA3FQ13275 785 aa13.53□□□□□ -0.24
PCNA-201ENST00000379143 FSCN1Q16658 493 aaKnown RBP13.53□□□□□ -0.24
PCNA-201ENST00000379143 LETM2Q2VYF4 491 aa13.53□□□□□ -0.24
PCNA-201ENST00000379143 Q4G0T1 1027 aa13.53□□□□□ -0.24
PCNA-201ENST00000379143 CELF3Q5SZQ8 465 aaKnown RBP13.53□□□□□ -0.24
PCNA-201ENST00000379143 GJC2Q5T442 439 aaPredicted RBP13.53□□□□□ -0.24
PCNA-201ENST00000379143 METTL7BQ6UX53 244 aa13.53□□□□□ -0.24
PCNA-201ENST00000379143 CYP2W1Q8TAV3 490 aa13.53□□□□□ -0.24
PCNA-201ENST00000379143 SDF4Q9BRK5 362 aa13.53□□□□□ -0.24
PCNA-201ENST00000379143 MLXIPQ9HAP2 919 aa13.53□□□□□ -0.24
PCNA-201ENST00000379143 NOL7Q9UMY1 257 aaKnown RBP13.53□□□□□ -0.24
PCNA-201ENST00000379143 A6NJR5 290 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 CCNT1O60563 726 aaKnown RBP13.52□□□□□ -0.25
PCNA-201ENST00000379143 KPNA6O60684 536 aa13.52□□□□□ -0.25
PCNA-201ENST00000379143 FARP2O94887 1054 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms