RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 GDF6Q6KF10 455 aaPredicted RBP21.83■■□□□ 1.09
TMEM88B-201ENST00000378821 FCHSD1Q86WN1 690 aa21.83■■□□□ 1.09
TMEM88B-201ENST00000378821 RRP36Q96EU6 259 aaKnown RBP21.83■■□□□ 1.09
TMEM88B-201ENST00000378821 INPP4AQ96PE3 977 aaPredicted RBP21.83■■□□□ 1.09
TMEM88B-201ENST00000378821 KATNAL1Q9BW62 490 aa21.83■■□□□ 1.09
TMEM88B-201ENST00000378821 GTF2IRD1Q9UHL9 959 aa21.83■■□□□ 1.09
TMEM88B-201ENST00000378821 TRIP12Q14669 1992 aaPredicted RBP21.83■■□□□ 1.08
TMEM88B-201ENST00000378821 MEIS2O14770 477 aa21.82■■□□□ 1.08
TMEM88B-201ENST00000378821 KRT32Q14532 448 aa21.82■■□□□ 1.08
TMEM88B-201ENST00000378821 HSDL1Q3SXM5 330 aa21.82■■□□□ 1.08
TMEM88B-201ENST00000378821 MAFAQ8NHW3 353 aaPredicted RBP21.82■■□□□ 1.08
TMEM88B-201ENST00000378821 CAGE1Q8TC20 777 aa21.82■■□□□ 1.08
TMEM88B-201ENST00000378821 SNX14Q9Y5W7 946 aa21.82■■□□□ 1.08
TMEM88B-201ENST00000378821 CCDC69A6NI79 296 aa21.81■■□□□ 1.08
TMEM88B-201ENST00000378821 PLEKHA8P1O95397 391 aa21.81■■□□□ 1.08
TMEM88B-201ENST00000378821 UBA1P22314 1058 aaKnown RBP21.81■■□□□ 1.08
TMEM88B-201ENST00000378821 PSEN2P49810 448 aa21.81■■□□□ 1.08
TMEM88B-201ENST00000378821 XRRA1Q6P2D8 792 aa21.81■■□□□ 1.08
TMEM88B-201ENST00000378821 RETREG2Q8NC44 543 aa21.81■■□□□ 1.08
TMEM88B-201ENST00000378821 GPKOWQ92917 476 aaPredicted RBP eCLIP21.81■■□□□ 1.08
TMEM88B-201ENST00000378821 TCEANC2Q96MN5 208 aa21.81■■□□□ 1.08
TMEM88B-201ENST00000378821 HDAC6Q9UBN7 1215 aa21.81■■□□□ 1.08
TMEM88B-201ENST00000378821 SLC4A7Q9Y6M7 1214 aa21.81■■□□□ 1.08
TMEM88B-201ENST00000378821 SPATA31C2B4DYI2 1134 aa21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 EPB41L2O43491 1005 aaKnown RBP21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 GGPS1O95749 300 aa21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 FOSL2P15408 326 aa21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 EXOSC10Q01780 885 aaKnown RBP21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 MFSD10Q14728 455 aa21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 GPNMBQ14956 572 aa21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 NFXL1Q6ZNB6 911 aa21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 FANCBQ8NB91 859 aa21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 AFAP1L1Q8TED9 768 aa21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 DHX38Q92620 1227 aaKnown RBP21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 SPATA33Q96N06 139 aa21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 C16orf70Q9BSU1 422 aa21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 USP26Q9BXU7 913 aa21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 MSRAQ9UJ68 235 aa21.8■■□□□ 1.08
TMEM88B-201ENST00000378821 TET1Q8NFU7 2136 aa21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 DLL1O00548 723 aa21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 SEMA3FQ13275 785 aa21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 KIAA0753Q2KHM9 967 aa21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 PCNX4Q63HM2 1172 aa21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 DHX32Q7L7V1 743 aaKnown RBP21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 CCDC155Q8N6L0 562 aa21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 PIBF1Q8WXW3 757 aa21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 JAKMIP1Q96N16 626 aaKnown RBP21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 SEC63Q9UGP8 760 aaKnown RBP21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 NOD1Q9Y239 953 aa21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 YBX2Q9Y2T7 364 aaKnown RBP21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 PCDHA11Q9Y5I1 949 aa21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 SLC12A7Q9Y666 1083 aa21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 PRUNE2Q8WUY3 3088 aa21.79■■□□□ 1.08
TMEM88B-201ENST00000378821 CHD7Q9P2D1 2997 aa21.78■■□□□ 1.08
TMEM88B-201ENST00000378821 PARNO95453 639 aaKnown RBP21.78■■□□□ 1.08
TMEM88B-201ENST00000378821 ZNF286BP0CG31 522 aa21.78■■□□□ 1.08
TMEM88B-201ENST00000378821 CPA1P15085 419 aa21.78■■□□□ 1.08
TMEM88B-201ENST00000378821 HOXC8P31273 242 aa21.78■■□□□ 1.08
TMEM88B-201ENST00000378821 GNPTABQ3T906 1256 aa21.78■■□□□ 1.08
TMEM88B-201ENST00000378821 USP17L6PQ6QN14 398 aa21.78■■□□□ 1.08
TMEM88B-201ENST00000378821 TMTC3Q6ZXV5 915 aa21.78■■□□□ 1.08
TMEM88B-201ENST00000378821 DEFB128Q7Z7B8 93 aa21.78■■□□□ 1.08
TMEM88B-201ENST00000378821 C7orf31Q8N865 590 aa21.78■■□□□ 1.08
TMEM88B-201ENST00000378821 BCAS3Q9H6U6 928 aa21.78■■□□□ 1.08
TMEM88B-201ENST00000378821 ACTN1P12814 892 aa21.77■■□□□ 1.08
TMEM88B-201ENST00000378821 ATP2A2P16615 1042 aaKnown RBP21.77■■□□□ 1.08
TMEM88B-201ENST00000378821 PTK7Q13308 1070 aa21.77■■□□□ 1.08
TMEM88B-201ENST00000378821 TRIM71Q2Q1W2 868 aaKnown RBP21.77■■□□□ 1.08
TMEM88B-201ENST00000378821 CMTR1Q8N1G2 835 aaKnown RBP21.77■■□□□ 1.08
TMEM88B-201ENST00000378821 PHOSPHO2Q8TCD6 241 aa21.77■■□□□ 1.08
TMEM88B-201ENST00000378821 CUL5Q93034 780 aa21.77■■□□□ 1.08
TMEM88B-201ENST00000378821 ZFP91Q96JP5 570 aaPredicted RBP21.77■■□□□ 1.08
TMEM88B-201ENST00000378821 SENP7Q9BQF6 1050 aa21.77■■□□□ 1.08
TMEM88B-201ENST00000378821 FIBPO43427 364 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 BAIAP3O94812 1187 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 CXCL10P02778 98 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 HMGB1P09429 215 aaKnown RBP21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 CKBP12277 381 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 SELPP16109 830 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 RXRAP19793 462 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 CHMP4BP1P59074 171 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 NEDD9Q14511 834 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 HIC1Q14526 733 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 TRAF7Q6Q0C0 670 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 APOA5Q6Q788 366 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 METTL7BQ6UX53 244 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 RAB11FIP4Q86YS3 637 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 TEX2Q8IWB9 1127 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 SMARCC2Q8TAQ2 1214 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 ALG1Q9BT22 464 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 NKX2-4Q9H2Z4 354 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 PSTPIP2Q9H939 334 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 MLXIPQ9HAP2 919 aa21.76■■□□□ 1.07
TMEM88B-201ENST00000378821 DOCK5Q9H7D0 1870 aa21.75■■□□□ 1.07
TMEM88B-201ENST00000378821 RABGGTBP53611 331 aa21.75■■□□□ 1.07
TMEM88B-201ENST00000378821 FUT2Q10981 343 aa21.75■■□□□ 1.07
TMEM88B-201ENST00000378821 LRRC8DQ7L1W4 858 aa21.75■■□□□ 1.07
TMEM88B-201ENST00000378821 SLC9A7Q96T83 725 aa21.75■■□□□ 1.07
TMEM88B-201ENST00000378821 SLC28A3Q9HAS3 691 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms